RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 YDJCA8MPS7 323 aa17.19■□□□□ 0.34
TPM3-205ENST00000328159 HLA-DOAP06340 250 aa17.19■□□□□ 0.34
TPM3-205ENST00000328159 SASS6Q6UVJ0 657 aa17.19■□□□□ 0.34
TPM3-205ENST00000328159 PIBF1Q8WXW3 757 aa17.19■□□□□ 0.34
TPM3-205ENST00000328159 PSMD1Q99460 953 aa17.19■□□□□ 0.34
TPM3-205ENST00000328159 LZTS2Q9BRK4 669 aa17.19■□□□□ 0.34
TPM3-205ENST00000328159 CABP5Q9NP86 173 aa17.19■□□□□ 0.34
TPM3-205ENST00000328159 MTMR7Q9Y216 660 aa17.18■□□□□ 0.34
TPM3-205ENST00000328159 CUTAO60888 179 aa17.17■□□□□ 0.34
TPM3-205ENST00000328159 AKR1B1P15121 316 aa17.17■□□□□ 0.34
TPM3-205ENST00000328159 NPY5RQ15761 445 aa17.17■□□□□ 0.34
TPM3-205ENST00000328159 PDLIM2Q96JY6 352 aa17.17■□□□□ 0.34
TPM3-205ENST00000328159 IDI2Q9BXS1 227 aa17.17■□□□□ 0.34
TPM3-205ENST00000328159 EHD4Q9H223 541 aa17.17■□□□□ 0.34
TPM3-205ENST00000328159 SIPA1L1O43166 1804 aa17.17■□□□□ 0.34
TPM3-205ENST00000328159 IGKV6D-41A0A0C4DH26 115 aa17.17■□□□□ 0.34
TPM3-205ENST00000328159 PFKFB1P16118 471 aa17.17■□□□□ 0.34
TPM3-205ENST00000328159 SHMT1P34896 483 aa17.17■□□□□ 0.34
TPM3-205ENST00000328159 NLRP5P59047 1200 aa17.17■□□□□ 0.34
TPM3-205ENST00000328159 SLC35G1Q2M3R5 365 aa17.17■□□□□ 0.34
TPM3-205ENST00000328159 CCDC125Q86Z20 511 aa17.17■□□□□ 0.34
TPM3-205ENST00000328159 ZFPM1Q8IX07 1006 aa17.17■□□□□ 0.34
TPM3-205ENST00000328159 TNFRSF25Q93038 417 aa17.17■□□□□ 0.34
TPM3-205ENST00000328159 SH3GLB2Q9NR46 395 aa17.17■□□□□ 0.34
TPM3-205ENST00000328159 MTMR4Q9NYA4 1195 aa17.17■□□□□ 0.34
TPM3-205ENST00000328159 GREB1LQ9C091 1923 aaPredicted RBP17.16■□□□□ 0.34
TPM3-205ENST00000328159 FAM205CA6NFA0 338 aa17.16■□□□□ 0.34
TPM3-205ENST00000328159 NPM3O75607 178 aaKnown RBP17.16■□□□□ 0.34
TPM3-205ENST00000328159 PARP1P09874 1014 aaKnown RBP17.16■□□□□ 0.34
TPM3-205ENST00000328159 VEGFAP15692 232 aaPredicted RBP17.16■□□□□ 0.34
TPM3-205ENST00000328159 CACNB3P54284 484 aa17.16■□□□□ 0.34
TPM3-205ENST00000328159 RESP18Q5W5W9 173 aa17.16■□□□□ 0.34
TPM3-205ENST00000328159 SHC4Q6S5L8 630 aa17.16■□□□□ 0.34
TPM3-205ENST00000328159 KRI1Q8N9T8 703 aaKnown RBP17.16■□□□□ 0.34
TPM3-205ENST00000328159 FAM200AQ8TCP9 573 aa17.16■□□□□ 0.34
TPM3-205ENST00000328159 DHX36Q9H2U1 1008 aaKnown RBP17.16■□□□□ 0.34
TPM3-205ENST00000328159 FAM198AQ9UFP1 575 aa17.16■□□□□ 0.34
TPM3-205ENST00000328159 CEP131Q9UPN4 1083 aa17.16■□□□□ 0.34
TPM3-205ENST00000328159 PCDHB6Q9Y5E3 794 aa17.16■□□□□ 0.34
TPM3-205ENST00000328159 FAM237AA0A1B0GTK4 181 aa17.15■□□□□ 0.34
TPM3-205ENST00000328159 KLRF2D3W0D1 207 aa17.15■□□□□ 0.34
TPM3-205ENST00000328159 CYTH3O43739 400 aa17.15■□□□□ 0.34
TPM3-205ENST00000328159 GOLGA8HP0CJ92 632 aa17.15■□□□□ 0.34
TPM3-205ENST00000328159 ANO6Q4KMQ2 910 aa17.15■□□□□ 0.34
TPM3-205ENST00000328159 EARS2Q5JPH6 523 aaKnown RBP17.15■□□□□ 0.34
TPM3-205ENST00000328159 LARGE2Q8N3Y3 721 aa17.15■□□□□ 0.34
TPM3-205ENST00000328159 TRIM44Q96DX7 344 aaPredicted RBP17.15■□□□□ 0.34
TPM3-205ENST00000328159 CLIC6Q96NY7 704 aa17.15■□□□□ 0.34
TPM3-205ENST00000328159 SPZ1Q9BXG8 430 aa17.15■□□□□ 0.34
TPM3-205ENST00000328159 NOL7Q9UMY1 257 aaKnown RBP17.15■□□□□ 0.34
TPM3-205ENST00000328159 TRIM75PA6NK02 468 aa17.15■□□□□ 0.34
TPM3-205ENST00000328159 ZNF202O95125 648 aa17.15■□□□□ 0.34
TPM3-205ENST00000328159 ATP2B1P20020 1258 aa17.15■□□□□ 0.34
TPM3-205ENST00000328159 CALML3P27482 149 aa17.15■□□□□ 0.34
TPM3-205ENST00000328159 TCP10Q12799 353 aa17.15■□□□□ 0.34
TPM3-205ENST00000328159 CFAP100Q494V2 611 aa17.15■□□□□ 0.34
TPM3-205ENST00000328159 RASGRP2Q7LDG7 609 aa17.15■□□□□ 0.34
TPM3-205ENST00000328159 GPKOWQ92917 476 aaPredicted RBP eCLIP17.15■□□□□ 0.341e-12■□□□□ 9.1
TPM3-205ENST00000328159 SDF4Q9BRK5 362 aa17.15■□□□□ 0.34
TPM3-205ENST00000328159 ZNF277Q9NRM2 450 aaPredicted RBP17.15■□□□□ 0.34
TPM3-205ENST00000328159 HPSEQ9Y251 543 aa17.15■□□□□ 0.34
TPM3-205ENST00000328159 ZBTB7AO95365 584 aa17.14■□□□□ 0.33
TPM3-205ENST00000328159 PTPREP23469 700 aa17.14■□□□□ 0.33
TPM3-205ENST00000328159 SMARCA1P28370 1054 aa17.14■□□□□ 0.33
TPM3-205ENST00000328159 SOGA3Q5TF21 947 aa17.14■□□□□ 0.33
TPM3-205ENST00000328159 RSBN1LQ6PCB5 846 aaPredicted RBP17.14■□□□□ 0.33
TPM3-205ENST00000328159 USP17L2Q6R6M4 530 aa17.14■□□□□ 0.33
TPM3-205ENST00000328159 VPS33BQ9H267 617 aa17.14■□□□□ 0.33
TPM3-205ENST00000328159 FBXO2Q9UK22 296 aaPredicted RBP17.14■□□□□ 0.33
TPM3-205ENST00000328159 MORC2Q9Y6X9 1032 aaPredicted RBP17.14■□□□□ 0.33
TPM3-205ENST00000328159 COL4A5P29400 1685 aa17.14■□□□□ 0.33
TPM3-205ENST00000328159 USP17L5A8MUK1 530 aa17.13■□□□□ 0.33
TPM3-205ENST00000328159 SYKP43405 635 aa17.13■□□□□ 0.33
TPM3-205ENST00000328159 TGFB2P61812 414 aa17.13■□□□□ 0.33
TPM3-205ENST00000328159 SH3BP5LQ7L8J4 393 aa17.13■□□□□ 0.33
TPM3-205ENST00000328159 CCDC17Q96LX7 622 aa17.13■□□□□ 0.33
TPM3-205ENST00000328159 TIGD1Q96MW7 591 aa17.13■□□□□ 0.33
TPM3-205ENST00000328159 TDRD3Q9H7E2 651 aaKnown RBP17.13■□□□□ 0.33
TPM3-205ENST00000328159 PI4KBQ9UBF8 816 aa17.13■□□□□ 0.33
TPM3-205ENST00000328159 DDTLA6NHG4 134 aaPredicted RBP17.12■□□□□ 0.33
TPM3-205ENST00000328159 TTLL1O95922 423 aa17.12■□□□□ 0.33
TPM3-205ENST00000328159 STX1AQ16623 288 aa17.12■□□□□ 0.33
TPM3-205ENST00000328159 NOM1Q5C9Z4 860 aaKnown RBP17.12■□□□□ 0.33
TPM3-205ENST00000328159 WWC2Q6AWC2 1192 aa17.12■□□□□ 0.33
TPM3-205ENST00000328159 ZSCAN29Q8IWY8 852 aaPredicted RBP17.12■□□□□ 0.33
TPM3-205ENST00000328159 BLIDQ8IZY5 108 aa17.12■□□□□ 0.33
TPM3-205ENST00000328159 LRRC47Q8N1G4 583 aaKnown RBP17.12■□□□□ 0.33
TPM3-205ENST00000328159 CCDC148Q8NFR7 591 aa17.12■□□□□ 0.33
TPM3-205ENST00000328159 DNAJC18Q9H819 358 aa17.12■□□□□ 0.33
TPM3-205ENST00000328159 CBX8Q9HC52 389 aa17.12■□□□□ 0.33
TPM3-205ENST00000328159 PIM2Q9P1W9 311 aa17.12■□□□□ 0.33
TPM3-205ENST00000328159 CLIP2Q9UDT6 1046 aa17.12■□□□□ 0.33
TPM3-205ENST00000328159 USP25Q9UHP3 1055 aa17.12■□□□□ 0.33
TPM3-205ENST00000328159 PCDHA4Q9UN74 947 aa17.12■□□□□ 0.33
TPM3-205ENST00000328159 MYH4Q9Y623 1939 aa17.12■□□□□ 0.33
TPM3-205ENST00000328159 PSMD14O00487 310 aa17.12■□□□□ 0.33
TPM3-205ENST00000328159 MPHOSPH10O00566 681 aaKnown RBP17.12■□□□□ 0.33
TPM3-205ENST00000328159 ENTPD3O75355 529 aa17.12■□□□□ 0.33
TPM3-205ENST00000328159 CAVIN2O95810 425 aa17.12■□□□□ 0.33
TPM3-205ENST00000328159 BMP15O95972 392 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms