RNA–Protein interactions for RNA: ENST00000323144.11

TPM3-204, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-204ENST00000323144 CHMP4BQ9H444 224 aaKnown RBP14.89□□□□□ -0.03
TPM3-204ENST00000323144 CWC22Q9HCG8 908 aaKnown RBP14.89□□□□□ -0.03
TPM3-204ENST00000323144 SWAP70Q9UH65 585 aa14.89□□□□□ -0.03
TPM3-204ENST00000323144 PFASO15067 1338 aa14.89□□□□□ -0.03
TPM3-204ENST00000323144 ZNFX1Q9P2E3 1918 aaKnown RBP14.88□□□□□ -0.03
TPM3-204ENST00000323144 XRCC5P13010 732 aaKnown RBP14.88□□□□□ -0.03
TPM3-204ENST00000323144 MAP2K5Q13163 448 aa14.88□□□□□ -0.03
TPM3-204ENST00000323144 UBE3CQ15386 1083 aa14.88□□□□□ -0.03
TPM3-204ENST00000323144 C12orf60Q5U649 245 aa14.88□□□□□ -0.03
TPM3-204ENST00000323144 C16orf86Q6ZW13 317 aa14.88□□□□□ -0.03
TPM3-204ENST00000323144 CCAR1Q8IX12 1150 aaKnown RBP14.88□□□□□ -0.03
TPM3-204ENST00000323144 C7orf61Q8IZ16 206 aa14.88□□□□□ -0.03
TPM3-204ENST00000323144 SPICE1Q8N0Z3 855 aa14.88□□□□□ -0.03
TPM3-204ENST00000323144 EPB41L4AQ9HCS5 686 aaPredicted RBP14.88□□□□□ -0.03
TPM3-204ENST00000323144 ATP8A2Q9NTI2 1148 aa14.88□□□□□ -0.03
TPM3-204ENST00000323144 ECHDC1Q9NTX5 307 aa14.88□□□□□ -0.03
TPM3-204ENST00000323144 SLC4A4Q9Y6R1 1079 aa14.88□□□□□ -0.03
TPM3-204ENST00000323144 USP17L12C9JPN9 530 aa14.87□□□□□ -0.03
TPM3-204ENST00000323144 USP17L21D6R901 530 aa14.87□□□□□ -0.03
TPM3-204ENST00000323144 CDK8P49336 464 aa14.87□□□□□ -0.03
TPM3-204ENST00000323144 GRB14Q14449 540 aa14.87□□□□□ -0.03
TPM3-204ENST00000323144 SIAH1Q8IUQ4 282 aa14.87□□□□□ -0.03
TPM3-204ENST00000323144 OTUD7AQ8TE49 926 aaPredicted RBP14.87□□□□□ -0.03
TPM3-204ENST00000323144 ATG4CQ96DT6 458 aa14.87□□□□□ -0.03
TPM3-204ENST00000323144 OGDHLQ9ULD0 1010 aa14.87□□□□□ -0.03
TPM3-204ENST00000323144 SZT2Q5T011 3432 aa14.86□□□□□ -0.03
TPM3-204ENST00000323144 M0R2C6 588 aa14.86□□□□□ -0.03
TPM3-204ENST00000323144 EVI5O60447 810 aa14.86□□□□□ -0.03
TPM3-204ENST00000323144 PTPREP23469 700 aa14.86□□□□□ -0.03
TPM3-204ENST00000323144 CCNA1P78396 465 aa14.86□□□□□ -0.03
TPM3-204ENST00000323144 CTR9Q6PD62 1173 aa14.86□□□□□ -0.03
TPM3-204ENST00000323144 SAMD1Q6SPF0 538 aaPredicted RBP14.86□□□□□ -0.03
TPM3-204ENST00000323144 NECAB2Q7Z6G3 386 aa14.86□□□□□ -0.03
TPM3-204ENST00000323144 STK11IPQ8N1F8 1099 aa14.86□□□□□ -0.03
TPM3-204ENST00000323144 ANKLE1Q8NAG6 615 aa14.86□□□□□ -0.03
TPM3-204ENST00000323144 NPLOC4Q8TAT6 608 aa14.86□□□□□ -0.03
TPM3-204ENST00000323144 MOV10L1Q9BXT6 1211 aaKnown RBP14.86□□□□□ -0.03
TPM3-204ENST00000323144 LAMA4Q16363 1823 aa14.86□□□□□ -0.03
TPM3-204ENST00000323144 SLC15A5A6NIM6 579 aa14.85□□□□□ -0.03
TPM3-204ENST00000323144 KBTBD3Q8NAB2 608 aa14.85□□□□□ -0.03
TPM3-204ENST00000323144 OSBP2Q969R2 916 aa14.85□□□□□ -0.03
TPM3-204ENST00000323144 C11orf49Q9H6J7 331 aa14.85□□□□□ -0.03
TPM3-204ENST00000323144 DCTPP1Q9H773 170 aa14.85□□□□□ -0.03
TPM3-204ENST00000323144 VCPKMTQ9H867 229 aa14.85□□□□□ -0.03
TPM3-204ENST00000323144 ARHGEF10LQ9HCE6 1279 aa14.85□□□□□ -0.03
TPM3-204ENST00000323144 ARPP21Q9UBL0 812 aaPredicted RBP14.85□□□□□ -0.03
TPM3-204ENST00000323144 ZMYND8Q9ULU4 1186 aaPredicted RBP14.85□□□□□ -0.03
TPM3-204ENST00000323144 TMX2Q9Y320 296 aa14.85□□□□□ -0.03
TPM3-204ENST00000323144 PCDHB15Q9Y5E8 787 aa14.85□□□□□ -0.03
TPM3-204ENST00000323144 FLOT1O75955 427 aa14.84□□□□□ -0.03
TPM3-204ENST00000323144 RRP1P56182 461 aaKnown RBP14.84□□□□□ -0.03
TPM3-204ENST00000323144 ATP2B2Q01814 1243 aa14.84□□□□□ -0.03
TPM3-204ENST00000323144 LHX8Q68G74 356 aa14.84□□□□□ -0.03
TPM3-204ENST00000323144 ZSCAN25Q6NSZ9 544 aa14.84□□□□□ -0.03
TPM3-204ENST00000323144 AMOTL1Q8IY63 956 aa14.84□□□□□ -0.03
TPM3-204ENST00000323144 TRMT44Q8IYL2 757 aaKnown RBP14.84□□□□□ -0.03
TPM3-204ENST00000323144 TRPV1Q8NER1 839 aa14.84□□□□□ -0.03
TPM3-204ENST00000323144 APPBP2Q92624 585 aa14.84□□□□□ -0.03
TPM3-204ENST00000323144 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.84□□□□□ -0.03
TPM3-204ENST00000323144 SPATC1LQ9H0A9 340 aa14.84□□□□□ -0.03
TPM3-204ENST00000323144 FBXO28Q9NVF7 368 aa14.84□□□□□ -0.03
TPM3-204ENST00000323144 NR2E3Q9Y5X4 410 aa14.84□□□□□ -0.03
TPM3-204ENST00000323144 IVNS1ABPQ9Y6Y0 642 aa14.84□□□□□ -0.03
TPM3-204ENST00000323144 LCTP09848 1927 aa14.84□□□□□ -0.03
TPM3-204ENST00000323144 LAMA3Q16787 3333 aa14.83□□□□□ -0.04
TPM3-204ENST00000323144 GSG1L2A8MUP6 293 aa14.83□□□□□ -0.04
TPM3-204ENST00000323144 WDR46O15213 610 aaKnown RBP14.83□□□□□ -0.04
TPM3-204ENST00000323144 GPAA1O43292 621 aa14.83□□□□□ -0.04
TPM3-204ENST00000323144 EEF2P13639 858 aaKnown RBP14.83□□□□□ -0.04
TPM3-204ENST00000323144 SYN1P17600 705 aa14.83□□□□□ -0.04
TPM3-204ENST00000323144 ERCC3P19447 782 aa14.83□□□□□ -0.04
TPM3-204ENST00000323144 RASA1P20936 1047 aa14.83□□□□□ -0.04
TPM3-204ENST00000323144 ADORA2AP29274 412 aa14.83□□□□□ -0.04
TPM3-204ENST00000323144 CYP2C19P33261 490 aa14.83□□□□□ -0.04
TPM3-204ENST00000323144 PI4K2BQ8TCG2 481 aa14.83□□□□□ -0.04
TPM3-204ENST00000323144 LPAR1Q92633 364 aa14.83□□□□□ -0.04
TPM3-204ENST00000323144 GPATCH3Q96I76 525 aa14.83□□□□□ -0.04
TPM3-204ENST00000323144 STRBPQ96SI9 672 aaKnown RBP14.83□□□□□ -0.04
TPM3-204ENST00000323144 NBPF3Q9H094 633 aa14.83□□□□□ -0.04
TPM3-204ENST00000323144 SH2D4AQ9H788 454 aa14.83□□□□□ -0.04
TPM3-204ENST00000323144 MCM3APO60318 1980 aa14.83□□□□□ -0.04
TPM3-204ENST00000323144 DNAH12Q6ZR08 3092 aa14.83□□□□□ -0.04
TPM3-204ENST00000323144 SOX1O00570 391 aaPredicted RBP14.82□□□□□ -0.04
TPM3-204ENST00000323144 GLRX3O76003 335 aaKnown RBP14.82□□□□□ -0.04
TPM3-204ENST00000323144 HOXC6P09630 235 aa14.82□□□□□ -0.04
TPM3-204ENST00000323144 COL6A1P12109 1028 aa14.82□□□□□ -0.04
TPM3-204ENST00000323144 CYBAP13498 195 aa14.82□□□□□ -0.04
TPM3-204ENST00000323144 DSG3P32926 999 aa14.82□□□□□ -0.04
TPM3-204ENST00000323144 PLS1Q14651 629 aa14.82□□□□□ -0.04
TPM3-204ENST00000323144 COG2Q14746 738 aa14.82□□□□□ -0.04
TPM3-204ENST00000323144 FAM83BQ5T0W9 1011 aa14.82□□□□□ -0.04
TPM3-204ENST00000323144 DDRGK1Q96HY6 314 aa14.82□□□□□ -0.04
TPM3-204ENST00000323144 NUP88Q99567 741 aaPredicted RBP14.82□□□□□ -0.04
TPM3-204ENST00000323144 SALL3Q9BXA9 1300 aa14.82□□□□□ -0.04
TPM3-204ENST00000323144 RNF113AO15541 343 aaKnown RBP14.81□□□□□ -0.04
TPM3-204ENST00000323144 RAD21O60216 631 aa14.81□□□□□ -0.04
TPM3-204ENST00000323144 IGHA2P01877 340 aa14.81□□□□□ -0.04
TPM3-204ENST00000323144 CAPN2P17655 700 aa14.81□□□□□ -0.04
TPM3-204ENST00000323144 TMEM132BQ14DG7 1078 aa14.81□□□□□ -0.04
TPM3-204ENST00000323144 LRRC26Q2I0M4 334 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms