RNA–Protein interactions for RNA: ENST00000322310.9

SSNA1-201, Transcript of SS nuclear autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSNA1, Length 896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-201ENST00000322310 TRIM43Q96BQ3 446 aaPredicted RBP23.9■■□□□ 1.42
SSNA1-201ENST00000322310 CABP5Q9NP86 173 aa23.9■■□□□ 1.42
SSNA1-201ENST00000322310 SEPT4O43236 478 aa23.89■■□□□ 1.41
SSNA1-201ENST00000322310 COBLO75128 1261 aa23.89■■□□□ 1.41
SSNA1-201ENST00000322310 SMAD3P84022 425 aaKnown RBP23.89■■□□□ 1.41
SSNA1-201ENST00000322310 SEPT2Q15019 361 aa23.89■■□□□ 1.41
SSNA1-201ENST00000322310 TTC6Q86TZ1 520 aa23.89■■□□□ 1.41
SSNA1-201ENST00000322310 ZNF236Q9UL36 1845 aa23.89■■□□□ 1.41
SSNA1-201ENST00000322310 IGSF3O75054 1194 aa23.88■■□□□ 1.41
SSNA1-201ENST00000322310 FRAT1Q92837 279 aaPredicted RBP23.88■■□□□ 1.41
SSNA1-201ENST00000322310 SPATC1LQ9H0A9 340 aa23.88■■□□□ 1.41
SSNA1-201ENST00000322310 CCDC8Q9H0W5 538 aaPredicted RBP23.88■■□□□ 1.41
SSNA1-201ENST00000322310 PRDM6Q9NQX0 595 aa23.88■■□□□ 1.41
SSNA1-201ENST00000322310 A0A1W2PRG0 241 aa23.87■■□□□ 1.41
SSNA1-201ENST00000322310 STRNO43815 780 aa23.87■■□□□ 1.41
SSNA1-201ENST00000322310 SURF6O75683 361 aaKnown RBP23.87■■□□□ 1.41
SSNA1-201ENST00000322310 FOSL2P15408 326 aa23.87■■□□□ 1.41
SSNA1-201ENST00000322310 ERCC3P19447 782 aa23.87■■□□□ 1.41
SSNA1-201ENST00000322310 EVX2Q03828 476 aa23.87■■□□□ 1.41
SSNA1-201ENST00000322310 COG2Q14746 738 aa23.87■■□□□ 1.41
SSNA1-201ENST00000322310 LRRC41Q15345 812 aa23.87■■□□□ 1.41
SSNA1-201ENST00000322310 FAM47AQ5JRC9 791 aa23.87■■□□□ 1.41
SSNA1-201ENST00000322310 TANGO6Q9C0B7 1094 aa23.87■■□□□ 1.41
SSNA1-201ENST00000322310 ANTXR1Q9H6X2 564 aa23.87■■□□□ 1.41
SSNA1-201ENST00000322310 IPO8O15397 1037 aaKnown RBP23.86■■□□□ 1.41
SSNA1-201ENST00000322310 BCAR3O75815 825 aa23.86■■□□□ 1.41
SSNA1-201ENST00000322310 ITGB8P26012 769 aa23.86■■□□□ 1.41
SSNA1-201ENST00000322310 CERS3Q8IU89 383 aa23.86■■□□□ 1.41
SSNA1-201ENST00000322310 SSH3Q8TE77 659 aa23.86■■□□□ 1.41
SSNA1-201ENST00000322310 TLE2Q04725 743 aa23.85■■□□□ 1.41
SSNA1-201ENST00000322310 HOXC10Q9NYD6 342 aa23.85■■□□□ 1.41
SSNA1-201ENST00000322310 A0A0G2JMZ2 1700 aa23.84■■□□□ 1.41
SSNA1-201ENST00000322310 MPHOSPH10O00566 681 aaKnown RBP23.84■■□□□ 1.41
SSNA1-201ENST00000322310 EPHB4P54760 987 aa23.84■■□□□ 1.41
SSNA1-201ENST00000322310 PLS1Q14651 629 aa23.84■■□□□ 1.41
SSNA1-201ENST00000322310 KIAA1755Q5JYT7 1200 aa23.84■■□□□ 1.41
SSNA1-201ENST00000322310 TMEM57Q8N5G2 664 aa23.84■■□□□ 1.41
SSNA1-201ENST00000322310 SHCBP1Q8NEM2 672 aa23.84■■□□□ 1.41
SSNA1-201ENST00000322310 EAF2Q96CJ1 260 aaPredicted RBP23.84■■□□□ 1.41
SSNA1-201ENST00000322310 C1orf115Q9H7X2 142 aa23.84■■□□□ 1.41
SSNA1-201ENST00000322310 POLR3DP05423 398 aaPredicted RBP23.83■■□□□ 1.41
SSNA1-201ENST00000322310 ATP8B2P98198 1209 aa23.83■■□□□ 1.41
SSNA1-201ENST00000322310 GABPAQ06546 454 aa23.83■■□□□ 1.41
SSNA1-201ENST00000322310 C1orf53Q5VUE5 145 aa23.83■■□□□ 1.41
SSNA1-201ENST00000322310 NCAPG2Q86XI2 1143 aa23.83■■□□□ 1.41
SSNA1-201ENST00000322310 MAML3Q96JK9 1138 aa23.83■■□□□ 1.41
SSNA1-201ENST00000322310 RNPC3Q96LT9 517 aaKnown RBP23.83■■□□□ 1.41
SSNA1-201ENST00000322310 RIOK1Q9BRS2 568 aaKnown RBP23.83■■□□□ 1.41
SSNA1-201ENST00000322310 MUC3AQ02505 3323 aa23.81■■□□□ 1.4
SSNA1-201ENST00000322310 MAP3K12Q12852 859 aa23.81■■□□□ 1.4
SSNA1-201ENST00000322310 SAMD1Q6SPF0 538 aaPredicted RBP23.81■■□□□ 1.4
SSNA1-201ENST00000322310 ATG4CQ96DT6 458 aa23.81■■□□□ 1.4
SSNA1-201ENST00000322310 MROH8Q9H579 483 aa23.81■■□□□ 1.4
SSNA1-201ENST00000322310 SLC5A4Q9NY91 659 aa23.81■■□□□ 1.4
SSNA1-201ENST00000322310 CLTBP09497 229 aa23.8■■□□□ 1.4
SSNA1-201ENST00000322310 DSG3P32926 999 aa23.8■■□□□ 1.4
SSNA1-201ENST00000322310 CLEC10AQ8IUN9 316 aa23.8■■□□□ 1.4
SSNA1-201ENST00000322310 USP38Q8NB14 1042 aa23.8■■□□□ 1.4
SSNA1-201ENST00000322310 NAV1Q8NEY1 1877 aa23.8■■□□□ 1.4
SSNA1-201ENST00000322310 XPNPEP3Q9NQH7 507 aa23.8■■□□□ 1.4
SSNA1-201ENST00000322310 PHF24Q9UPV7 400 aa23.8■■□□□ 1.4
SSNA1-201ENST00000322310 NOP58Q9Y2X3 529 aaKnown RBP23.8■■□□□ 1.4
SSNA1-201ENST00000322310 TACC3Q9Y6A5 838 aa23.8■■□□□ 1.4
SSNA1-201ENST00000322310 FLOT1O75955 427 aa23.79■■□□□ 1.4
SSNA1-201ENST00000322310 PGK1P00558 417 aa23.79■■□□□ 1.4
SSNA1-201ENST00000322310 GRIN2CQ14957 1233 aa23.79■■□□□ 1.4
SSNA1-201ENST00000322310 ABRAQ8N0Z2 381 aa23.79■■□□□ 1.4
SSNA1-201ENST00000322310 SPICE1Q8N0Z3 855 aa23.79■■□□□ 1.4
SSNA1-201ENST00000322310 MB21D1Q8N884 522 aa23.79■■□□□ 1.4
SSNA1-201ENST00000322310 SLC44A5Q8NCS7 719 aa23.79■■□□□ 1.4
SSNA1-201ENST00000322310 MCM9Q9NXL9 1143 aa23.79■■□□□ 1.4
SSNA1-201ENST00000322310 TTC28Q96AY4 2481 aa23.79■■□□□ 1.4
SSNA1-201ENST00000322310 MAGEB6P1A0A0J9YX57 407 aa23.78■■□□□ 1.4
SSNA1-201ENST00000322310 PQBP1O60828 265 aaKnown RBP23.78■■□□□ 1.4
SSNA1-201ENST00000322310 SYMPKQ92797 1274 aaKnown RBP23.78■■□□□ 1.4
SSNA1-201ENST00000322310 TMEM265A0A087WTH1 108 aa23.77■■□□□ 1.4
SSNA1-201ENST00000322310 CYP2D6P10635 497 aa23.77■■□□□ 1.4
SSNA1-201ENST00000322310 RARBP10826 455 aa23.77■■□□□ 1.4
SSNA1-201ENST00000322310 FCER1AP12319 257 aa23.77■■□□□ 1.4
SSNA1-201ENST00000322310 RAG1P15918 1043 aa23.77■■□□□ 1.4
SSNA1-201ENST00000322310 LENG1Q96BZ8 264 aaPredicted RBP23.77■■□□□ 1.4
SSNA1-201ENST00000322310 A0A1W2PQ45 241 aaPredicted RBP23.76■■□□□ 1.39
SSNA1-201ENST00000322310 A0A1W2PQY0 241 aa23.76■■□□□ 1.39
SSNA1-201ENST00000322310 KIAA0355O15063 1070 aa23.76■■□□□ 1.39
SSNA1-201ENST00000322310 PGK2P07205 417 aa23.76■■□□□ 1.39
SSNA1-201ENST00000322310 TAL1P17542 331 aaPredicted RBP23.76■■□□□ 1.39
SSNA1-201ENST00000322310 TMEM132BQ14DG7 1078 aa23.76■■□□□ 1.39
SSNA1-201ENST00000322310 TMEM179Q6ZVK1 233 aa23.76■■□□□ 1.39
SSNA1-201ENST00000322310 SIAH1Q8IUQ4 282 aa23.76■■□□□ 1.39
SSNA1-201ENST00000322310 SDR42E1Q8WUS8 393 aa23.76■■□□□ 1.39
SSNA1-201ENST00000322310 CRNKL1Q9BZJ0 848 aaKnown RBP23.76■■□□□ 1.39
SSNA1-201ENST00000322310 DNAJB2P25686 324 aa23.75■■□□□ 1.39
SSNA1-201ENST00000322310 FPGSQ05932 587 aa23.75■■□□□ 1.39
SSNA1-201ENST00000322310 RNF180Q86T96 592 aa23.75■■□□□ 1.39
SSNA1-201ENST00000322310 DYNLL2Q96FJ2 89 aa23.75■■□□□ 1.39
SSNA1-201ENST00000322310 TMED8Q6PL24 325 aaPredicted RBP23.74■■□□□ 1.39
SSNA1-201ENST00000322310 MMP19Q99542 508 aa23.74■■□□□ 1.39
SSNA1-201ENST00000322310 TMEM39AQ9NV64 488 aa23.74■■□□□ 1.39
SSNA1-201ENST00000322310 SMCHD1A6NHR9 2005 aa23.73■■□□□ 1.39
SSNA1-201ENST00000322310 AKR1B1P15121 316 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms