RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 NAPAP54920 295 aa14.29□□□□□ -0.12
DNMT3A-202ENST00000321117 CASP8Q14790 479 aa14.29□□□□□ -0.12
DNMT3A-202ENST00000321117 CFAP58Q5T655 872 aa14.29□□□□□ -0.12
DNMT3A-202ENST00000321117 NBPF14Q5TI25 921 aa14.29□□□□□ -0.12
DNMT3A-202ENST00000321117 GPATCH11Q8N954 259 aa14.29□□□□□ -0.12
DNMT3A-202ENST00000321117 ATRIPQ8WXE1 791 aa14.29□□□□□ -0.12
DNMT3A-202ENST00000321117 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.29□□□□□ -0.12
DNMT3A-202ENST00000321117 TMCO5BA8MYB1 307 aa14.28□□□□□ -0.12
DNMT3A-202ENST00000321117 ENC1O14682 589 aa14.28□□□□□ -0.12
DNMT3A-202ENST00000321117 MAP3K9P80192 1104 aa14.28□□□□□ -0.12
DNMT3A-202ENST00000321117 RAD51AP2Q09MP3 1159 aa14.28□□□□□ -0.12
DNMT3A-202ENST00000321117 CRACR2BQ8N4Y2 399 aaPredicted RBP14.28□□□□□ -0.12
DNMT3A-202ENST00000321117 OTUD6BQ8N6M0 293 aa14.28□□□□□ -0.12
DNMT3A-202ENST00000321117 SDR42E1Q8WUS8 393 aa14.28□□□□□ -0.12
DNMT3A-202ENST00000321117 ADGRG1Q9Y653 693 aa14.28□□□□□ -0.12
DNMT3A-202ENST00000321117 ZBTB22O15209 634 aa14.28□□□□□ -0.12
DNMT3A-202ENST00000321117 TSPY3P0CV98 308 aa14.28□□□□□ -0.12
DNMT3A-202ENST00000321117 TSPY8P0CW00 308 aa14.28□□□□□ -0.12
DNMT3A-202ENST00000321117 MTF1Q14872 753 aa14.28□□□□□ -0.12
DNMT3A-202ENST00000321117 VPS36Q86VN1 386 aa14.28□□□□□ -0.12
DNMT3A-202ENST00000321117 IFT81Q8WYA0 676 aa14.28□□□□□ -0.12
DNMT3A-202ENST00000321117 IRX2Q9BZI1 471 aaPredicted RBP14.28□□□□□ -0.12
DNMT3A-202ENST00000321117 UBN2Q6ZU65 1347 aa14.28□□□□□ -0.12
DNMT3A-202ENST00000321117 IKQ13123 557 aaPredicted RBP14.28□□□□□ -0.12
DNMT3A-202ENST00000321117 STRBPQ96SI9 672 aaKnown RBP14.28□□□□□ -0.12
DNMT3A-202ENST00000321117 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.28□□□□□ -0.12
DNMT3A-202ENST00000321117 MCM9Q9NXL9 1143 aa14.28□□□□□ -0.12
DNMT3A-202ENST00000321117 FHOD1Q9Y613 1164 aa14.28□□□□□ -0.12
DNMT3A-202ENST00000321117 DIP2AQ14689 1571 aa14.28□□□□□ -0.12
DNMT3A-202ENST00000321117 TEX33O43247 280 aa14.27□□□□□ -0.12
DNMT3A-202ENST00000321117 ANTXR2P58335 489 aa14.27□□□□□ -0.12
DNMT3A-202ENST00000321117 IFFO1Q0D2I5 559 aa14.27□□□□□ -0.12
DNMT3A-202ENST00000321117 C8orf74Q6P047 294 aa14.27□□□□□ -0.12
DNMT3A-202ENST00000321117 PSMB7Q99436 277 aa14.27□□□□□ -0.12
DNMT3A-202ENST00000321117 INCENPQ9NQS7 918 aa14.27□□□□□ -0.12
DNMT3A-202ENST00000321117 DIP2BQ9P265 1576 aa14.27□□□□□ -0.12
DNMT3A-202ENST00000321117 PLA2G4AP47712 749 aa14.27□□□□□ -0.12
DNMT3A-202ENST00000321117 IRX5P78411 483 aaPredicted RBP14.27□□□□□ -0.12
DNMT3A-202ENST00000321117 REXO1L1PQ8IX06 675 aa14.27□□□□□ -0.12
DNMT3A-202ENST00000321117 PAGE5Q96GU1 130 aa14.27□□□□□ -0.12
DNMT3A-202ENST00000321117 ZSCAN10Q96SZ4 725 aaPredicted RBP14.27□□□□□ -0.12
DNMT3A-202ENST00000321117 AGXT2Q9BYV1 514 aa14.27□□□□□ -0.12
DNMT3A-202ENST00000321117 STK36Q9NRP7 1315 aa14.27□□□□□ -0.13
DNMT3A-202ENST00000321117 MYO1CO00159 1063 aa14.27□□□□□ -0.13
DNMT3A-202ENST00000321117 NDUFAB1O14561 156 aa14.27□□□□□ -0.13
DNMT3A-202ENST00000321117 PRKAB2O43741 272 aa14.27□□□□□ -0.13
DNMT3A-202ENST00000321117 PPP1R2P41236 205 aa14.27□□□□□ -0.13
DNMT3A-202ENST00000321117 DNM2P50570 870 aa14.27□□□□□ -0.13
DNMT3A-202ENST00000321117 ZNF579Q8NAF0 562 aaKnown RBP14.27□□□□□ -0.13
DNMT3A-202ENST00000321117 NEDD4P46934 1319 aa14.27□□□□□ -0.13
DNMT3A-202ENST00000321117 GOLGA6L7A0A1B0GV03 622 aa14.27□□□□□ -0.13
DNMT3A-202ENST00000321117 RPN1P04843 607 aaKnown RBP14.27□□□□□ -0.13
DNMT3A-202ENST00000321117 GIGYF2Q6Y7W6 1299 aaKnown RBP14.27□□□□□ -0.13
DNMT3A-202ENST00000321117 GIMAP7Q8NHV1 300 aa14.27□□□□□ -0.13
DNMT3A-202ENST00000321117 LRRC27Q9C0I9 530 aa14.27□□□□□ -0.13
DNMT3A-202ENST00000321117 LY9Q9HBG7 655 aa14.27□□□□□ -0.13
DNMT3A-202ENST00000321117 SEPT11Q9NVA2 429 aaKnown RBP14.27□□□□□ -0.13
DNMT3A-202ENST00000321117 HPS5Q9UPZ3 1129 aa14.27□□□□□ -0.13
DNMT3A-202ENST00000321117 IBSPP21815 317 aaPredicted RBP14.26□□□□□ -0.13
DNMT3A-202ENST00000321117 CASP1P29466 404 aa14.26□□□□□ -0.13
DNMT3A-202ENST00000321117 PPFIA1Q13136 1202 aa14.26□□□□□ -0.13
DNMT3A-202ENST00000321117 NCAPHQ15003 741 aa14.26□□□□□ -0.13
DNMT3A-202ENST00000321117 AATFQ9NY61 560 aaKnown RBP eCLIP14.26□□□□□ -0.13
DNMT3A-202ENST00000321117 NBPF26B4DH59 902 aa14.26□□□□□ -0.13
DNMT3A-202ENST00000321117 ST5P78524 1137 aa14.26□□□□□ -0.13
DNMT3A-202ENST00000321117 ARID5AQ03989 594 aa14.26□□□□□ -0.13
DNMT3A-202ENST00000321117 LETM2Q2VYF4 491 aa14.26□□□□□ -0.13
DNMT3A-202ENST00000321117 NCAPH2Q6IBW4 605 aa14.26□□□□□ -0.13
DNMT3A-202ENST00000321117 NBPF10Q6P3W6 841 aaKnown RBP14.26□□□□□ -0.13
DNMT3A-202ENST00000321117 NBPF15Q8N660 670 aa14.26□□□□□ -0.13
DNMT3A-202ENST00000321117 TC2NQ8N9U0 490 aa14.26□□□□□ -0.13
DNMT3A-202ENST00000321117 RNF40O75150 1001 aa14.26□□□□□ -0.13
DNMT3A-202ENST00000321117 FMR1Q06787 632 aaKnown RBP eCLIP14.26□□□□□ -0.13
DNMT3A-202ENST00000321117 SPTY2D1Q68D10 685 aaPredicted RBP14.26□□□□□ -0.13
DNMT3A-202ENST00000321117 SPAG5Q96R06 1193 aa14.26□□□□□ -0.13
DNMT3A-202ENST00000321117 MAP3K15Q6ZN16 1313 aa14.25□□□□□ -0.13
DNMT3A-202ENST00000321117 CPDO75976 1380 aa14.25□□□□□ -0.13
DNMT3A-202ENST00000321117 BAG3O95817 575 aa14.25□□□□□ -0.13
DNMT3A-202ENST00000321117 MAGEA1P43355 309 aa14.25□□□□□ -0.13
DNMT3A-202ENST00000321117 BCAMP50895 628 aa14.25□□□□□ -0.13
DNMT3A-202ENST00000321117 KRT31Q15323 416 aa14.25□□□□□ -0.13
DNMT3A-202ENST00000321117 IFIH1Q9BYX4 1025 aaKnown RBP14.25□□□□□ -0.13
DNMT3A-202ENST00000321117 C6orf50Q9HD87 102 aa14.25□□□□□ -0.13
DNMT3A-202ENST00000321117 NUTM2BA6NNL0 878 aaPredicted RBP14.25□□□□□ -0.13
DNMT3A-202ENST00000321117 NUTM2EB1AL46 878 aaPredicted RBP14.25□□□□□ -0.13
DNMT3A-202ENST00000321117 SGMS1Q86VZ5 419 aa14.25□□□□□ -0.13
DNMT3A-202ENST00000321117 LRRN4CLQ8ND94 238 aa14.25□□□□□ -0.13
DNMT3A-202ENST00000321117 SEMA3EO15041 775 aa14.25□□□□□ -0.13
DNMT3A-202ENST00000321117 ILDR1Q86SU0 546 aaPredicted RBP14.25□□□□□ -0.13
DNMT3A-202ENST00000321117 GPIHBP1Q8IV16 184 aa14.25□□□□□ -0.13
DNMT3A-202ENST00000321117 EEF2KMTQ96G04 330 aa14.25□□□□□ -0.13
DNMT3A-202ENST00000321117 ZMYND10O75800 440 aa14.24□□□□□ -0.13
DNMT3A-202ENST00000321117 NDUFA10O95299 355 aa14.24□□□□□ -0.13
DNMT3A-202ENST00000321117 TAX1BP1Q86VP1 789 aa14.24□□□□□ -0.13
DNMT3A-202ENST00000321117 UBA5Q9GZZ9 404 aa14.24□□□□□ -0.13
DNMT3A-202ENST00000321117 PARP1P09874 1014 aaKnown RBP14.24□□□□□ -0.13
DNMT3A-202ENST00000321117 INPP5BP32019 993 aa14.24□□□□□ -0.13
DNMT3A-202ENST00000321117 TCERG1LQ5VWI1 586 aa14.24□□□□□ -0.13
DNMT3A-202ENST00000321117 CNNM4Q6P4Q7 775 aa14.24□□□□□ -0.13
DNMT3A-202ENST00000321117 TRIM58Q8NG06 486 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms