RNA–Protein interactions for RNA: ENST00000318988.10

CTDNEP1-201, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,549 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-201ENST00000318988 MAP3K14Q99558 947 aa31.98■■■□□ 2.71
CTDNEP1-201ENST00000318988 SH2D4AQ9H788 454 aa31.98■■■□□ 2.71
CTDNEP1-201ENST00000318988 NID2Q14112 1375 aa31.97■■■□□ 2.71
CTDNEP1-201ENST00000318988 MAP3K9P80192 1104 aa31.97■■■□□ 2.71
CTDNEP1-201ENST00000318988 ARMC9Q7Z3E5 817 aa31.97■■■□□ 2.71
CTDNEP1-201ENST00000318988 ZKSCAN4Q969J2 545 aaPredicted RBP31.97■■■□□ 2.71
CTDNEP1-201ENST00000318988 CWC22Q9HCG8 908 aaKnown RBP31.97■■■□□ 2.71
CTDNEP1-201ENST00000318988 RAD21O60216 631 aa31.96■■■□□ 2.71
CTDNEP1-201ENST00000318988 DDX55Q8NHQ9 600 aaKnown RBP eCLIP31.96■■■□□ 2.71
CTDNEP1-201ENST00000318988 SYNPO2Q9UMS6 1093 aa31.96■■■□□ 2.71
CTDNEP1-201ENST00000318988 CSADQ9Y600 493 aa31.96■■■□□ 2.71
CTDNEP1-201ENST00000318988 USP17L5A8MUK1 530 aa31.95■■■□□ 2.71
CTDNEP1-201ENST00000318988 ADD1P35611 737 aaKnown RBP31.95■■■□□ 2.71
CTDNEP1-201ENST00000318988 CHADLQ6NUI6 762 aa31.95■■■□□ 2.71
CTDNEP1-201ENST00000318988 ZNF408Q9H9D4 720 aa31.95■■■□□ 2.71
CTDNEP1-201ENST00000318988 TRAF5O00463 557 aa31.95■■■□□ 2.7
CTDNEP1-201ENST00000318988 CDC27P30260 824 aa31.95■■■□□ 2.7
CTDNEP1-201ENST00000318988 NOL9Q5SY16 702 aaKnown RBP31.95■■■□□ 2.7
CTDNEP1-201ENST00000318988 SIAH1Q8IUQ4 282 aa31.95■■■□□ 2.7
CTDNEP1-201ENST00000318988 PARP1P09874 1014 aaKnown RBP31.94■■■□□ 2.7
CTDNEP1-201ENST00000318988 GNAQP50148 359 aa31.94■■■□□ 2.7
CTDNEP1-201ENST00000318988 GRM4Q14833 912 aa31.94■■■□□ 2.7
CTDNEP1-201ENST00000318988 AS3MTQ9HBK9 375 aa31.94■■■□□ 2.7
CTDNEP1-201ENST00000318988 FRMD4AQ9P2Q2 1039 aaPredicted RBP31.94■■■□□ 2.7
CTDNEP1-201ENST00000318988 FEZ1Q99689 392 aa31.93■■■□□ 2.7
CTDNEP1-201ENST00000318988 GOPCQ9HD26 462 aa31.93■■■□□ 2.7
CTDNEP1-201ENST00000318988 HMGN5P82970 282 aaKnown RBP31.92■■■□□ 2.7
CTDNEP1-201ENST00000318988 NSUN7Q8NE18 718 aaKnown RBP31.92■■■□□ 2.7
CTDNEP1-201ENST00000318988 FAM217BQ9NTX9 383 aaPredicted RBP31.92■■■□□ 2.7
CTDNEP1-201ENST00000318988 TMX2Q9Y320 296 aa31.92■■■□□ 2.7
CTDNEP1-201ENST00000318988 KIF3AQ9Y496 699 aa31.92■■■□□ 2.7
CTDNEP1-201ENST00000318988 ANKRD13AQ8IZ07 590 aa31.91■■■□□ 2.7
CTDNEP1-201ENST00000318988 GMCL1P1Q8NEA9 526 aa31.91■■■□□ 2.7
CTDNEP1-201ENST00000318988 ACER1Q8TDN7 264 aa31.91■■■□□ 2.7
CTDNEP1-201ENST00000318988 ISY1Q9ULR0 285 aaKnown RBP31.91■■■□□ 2.7
CTDNEP1-201ENST00000318988 PTPDC1A2A3K4 754 aa31.9■■■□□ 2.7
CTDNEP1-201ENST00000318988 PDHBP11177 359 aa31.9■■■□□ 2.7
CTDNEP1-201ENST00000318988 PTPRAP18433 802 aa31.9■■■□□ 2.7
CTDNEP1-201ENST00000318988 GJB2P29033 226 aa31.9■■■□□ 2.7
CTDNEP1-201ENST00000318988 ASPRV1Q53RT3 343 aa31.9■■■□□ 2.7
CTDNEP1-201ENST00000318988 SLFN13Q68D06 897 aa31.9■■■□□ 2.7
CTDNEP1-201ENST00000318988 CCDC84Q86UT8 332 aaPredicted RBP31.9■■■□□ 2.7
CTDNEP1-201ENST00000318988 A0A1W2PRG0 241 aa31.9■■■□□ 2.7
CTDNEP1-201ENST00000318988 F5H6K3 240 aa31.9■■■□□ 2.7
CTDNEP1-201ENST00000318988 CTDNEP1O95476 244 aa31.9■■■□□ 2.7
CTDNEP1-201ENST00000318988 ECE1P42892 770 aa31.9■■■□□ 2.7
CTDNEP1-201ENST00000318988 KLRC3Q07444 240 aa31.9■■■□□ 2.7
CTDNEP1-201ENST00000318988 VGLL4Q14135 290 aa31.9■■■□□ 2.7
CTDNEP1-201ENST00000318988 MAP3K11Q16584 847 aa31.9■■■□□ 2.7
CTDNEP1-201ENST00000318988 CCDC96Q2M329 555 aa31.9■■■□□ 2.7
CTDNEP1-201ENST00000318988 FAM184AQ8NB25 1140 aa31.9■■■□□ 2.7
CTDNEP1-201ENST00000318988 DCAF4Q8WV16 495 aa31.9■■■□□ 2.7
CTDNEP1-201ENST00000318988 LZTS2Q9BRK4 669 aa31.9■■■□□ 2.7
CTDNEP1-201ENST00000318988 ZBTB4Q9P1Z0 1013 aaPredicted RBP31.9■■■□□ 2.7
CTDNEP1-201ENST00000318988 JAK2O60674 1132 aa31.89■■■□□ 2.7
CTDNEP1-201ENST00000318988 IFNAR1P17181 557 aa31.89■■■□□ 2.7
CTDNEP1-201ENST00000318988 SSRP1Q08945 709 aaKnown RBP31.89■■■□□ 2.7
CTDNEP1-201ENST00000318988 USP17L2Q6R6M4 530 aa31.89■■■□□ 2.7
CTDNEP1-201ENST00000318988 PPP1R3FQ6ZSY5 799 aaPredicted RBP31.89■■■□□ 2.7
CTDNEP1-201ENST00000318988 TMTC3Q6ZXV5 915 aa31.89■■■□□ 2.7
CTDNEP1-201ENST00000318988 TRIM22Q8IYM9 498 aa31.89■■■□□ 2.7
CTDNEP1-201ENST00000318988 DDX11Q96FC9 970 aa31.89■■■□□ 2.7
CTDNEP1-201ENST00000318988 MAD2L2Q9UI95 211 aa31.89■■■□□ 2.7
CTDNEP1-201ENST00000318988 DOCK1Q14185 1865 aa31.88■■■□□ 2.69
CTDNEP1-201ENST00000318988 ATAD5Q96QE3 1844 aa31.88■■■□□ 2.69
CTDNEP1-201ENST00000318988 MYH4Q9Y623 1939 aa31.88■■■□□ 2.69
CTDNEP1-201ENST00000318988 SLC1A4P43007 532 aa31.88■■■□□ 2.69
CTDNEP1-201ENST00000318988 AKAP17AQ02040 695 aaKnown RBP31.88■■■□□ 2.69
CTDNEP1-201ENST00000318988 CCDC82Q8N4S0 544 aa31.88■■■□□ 2.69
CTDNEP1-201ENST00000318988 SMARCC2Q8TAQ2 1214 aa31.88■■■□□ 2.69
CTDNEP1-201ENST00000318988 ZHX2Q9Y6X8 837 aa31.88■■■□□ 2.69
CTDNEP1-201ENST00000318988 PALM3A6NDB9 673 aaPredicted RBP31.87■■■□□ 2.69
CTDNEP1-201ENST00000318988 SNHG28P0DPA3 235 aa31.87■■■□□ 2.69
CTDNEP1-201ENST00000318988 GPATCH4Q5T3I0 446 aaKnown RBP31.87■■■□□ 2.69
CTDNEP1-201ENST00000318988 WDR18Q9BV38 432 aa31.87■■■□□ 2.69
CTDNEP1-201ENST00000318988 KLRF2D3W0D1 207 aa31.86■■■□□ 2.69
CTDNEP1-201ENST00000318988 CELF2O95319 508 aaKnown RBP31.86■■■□□ 2.69
CTDNEP1-201ENST00000318988 PLEKHA8P1O95397 391 aa31.86■■■□□ 2.69
CTDNEP1-201ENST00000318988 NDUFB10O96000 172 aa31.86■■■□□ 2.69
CTDNEP1-201ENST00000318988 GOLGA8HP0CJ92 632 aa31.86■■■□□ 2.69
CTDNEP1-201ENST00000318988 FKBP1BP68106 108 aa31.86■■■□□ 2.69
CTDNEP1-201ENST00000318988 FMR1Q06787 632 aaKnown RBP eCLIP31.86■■■□□ 2.69
CTDNEP1-201ENST00000318988 ZYXQ15942 572 aaKnown RBP31.86■■■□□ 2.69
CTDNEP1-201ENST00000318988 NTRK3Q16288 839 aa31.86■■■□□ 2.69
CTDNEP1-201ENST00000318988 MOB2Q70IA6 237 aa31.86■■■□□ 2.69
CTDNEP1-201ENST00000318988 C2orf69Q8N8R5 385 aa31.86■■■□□ 2.69
CTDNEP1-201ENST00000318988 ZNF280CQ8ND82 737 aa31.86■■■□□ 2.69
CTDNEP1-201ENST00000318988 SLC26A6Q9BXS9 759 aa31.86■■■□□ 2.69
CTDNEP1-201ENST00000318988 VCPKMTQ9H867 229 aa31.86■■■□□ 2.69
CTDNEP1-201ENST00000318988 ORC3Q9UBD5 711 aaPredicted RBP31.86■■■□□ 2.69
CTDNEP1-201ENST00000318988 SNCAIPQ9Y6H5 919 aa31.86■■■□□ 2.69
CTDNEP1-201ENST00000318988 USP17L10C9JJH3 530 aa31.85■■■□□ 2.69
CTDNEP1-201ENST00000318988 DTNBO60941 627 aa31.85■■■□□ 2.69
CTDNEP1-201ENST00000318988 PPFIA3O75145 1194 aa31.85■■■□□ 2.69
CTDNEP1-201ENST00000318988 CMTR1Q8N1G2 835 aaKnown RBP31.85■■■□□ 2.69
CTDNEP1-201ENST00000318988 STAG2Q8N3U4 1231 aa31.85■■■□□ 2.69
CTDNEP1-201ENST00000318988 PHKBQ93100 1093 aa31.85■■■□□ 2.69
CTDNEP1-201ENST00000318988 GMCL1Q96IK5 515 aa31.85■■■□□ 2.69
CTDNEP1-201ENST00000318988 KIAA1683Q9H0B3 1180 aa31.85■■■□□ 2.69
CTDNEP1-201ENST00000318988 FRMPD2Q68DX3 1309 aaPredicted RBP31.85■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms