RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 SBK1Q52WX2 424 aa17.02■□□□□ 0.32
CHFR-202ENST00000315585 AMOTL1Q8IY63 956 aa17.02■□□□□ 0.32
CHFR-202ENST00000315585 PHF20Q9BVI0 1012 aa17.02■□□□□ 0.32
CHFR-202ENST00000315585 ECM29Q5VYK3 1845 aa17.02■□□□□ 0.31
CHFR-202ENST00000315585 CCDC178Q5BJE1 867 aa17.01■□□□□ 0.31
CHFR-202ENST00000315585 ISM2Q6H9L7 571 aa17.01■□□□□ 0.31
CHFR-202ENST00000315585 FEZ1Q99689 392 aa17.01■□□□□ 0.31
CHFR-202ENST00000315585 STK32BQ9NY57 414 aa17.01■□□□□ 0.31
CHFR-202ENST00000315585 ANKRD31Q8N7Z5 1873 aa17.01■□□□□ 0.31
CHFR-202ENST00000315585 CDK11BP21127 795 aaKnown RBP17.01■□□□□ 0.31
CHFR-202ENST00000315585 TRAPPC10P48553 1259 aa17.01■□□□□ 0.31
CHFR-202ENST00000315585 SARSP49591 514 aaKnown RBP17.01■□□□□ 0.31
CHFR-202ENST00000315585 ARMCX5Q6P1M9 558 aa17.01■□□□□ 0.31
CHFR-202ENST00000315585 CTR9Q6PD62 1173 aa17.01■□□□□ 0.31
CHFR-202ENST00000315585 DCP1AQ9NPI6 582 aaPredicted RBP17.01■□□□□ 0.31
CHFR-202ENST00000315585 PCDHB6Q9Y5E3 794 aa17.01■□□□□ 0.31
CHFR-202ENST00000315585 ZSCAN12O43309 604 aa17■□□□□ 0.31
CHFR-202ENST00000315585 KIF5BP33176 963 aa17■□□□□ 0.31
CHFR-202ENST00000315585 PPP4CP60510 307 aa17■□□□□ 0.31
CHFR-202ENST00000315585 NR5A1Q13285 461 aa17■□□□□ 0.31
CHFR-202ENST00000315585 VSTM4Q8IW00 320 aa17■□□□□ 0.31
CHFR-202ENST00000315585 COA1Q9GZY4 146 aa17■□□□□ 0.31
CHFR-202ENST00000315585 TRMT1Q9NXH9 659 aaKnown RBP17■□□□□ 0.31
CHFR-202ENST00000315585 POLLQ9UGP5 575 aa17■□□□□ 0.31
CHFR-202ENST00000315585 GOLGA6L9A6NEM1 432 aa17■□□□□ 0.31
CHFR-202ENST00000315585 USP17L12C9JPN9 530 aa17■□□□□ 0.31
CHFR-202ENST00000315585 USP17L21D6R901 530 aa17■□□□□ 0.31
CHFR-202ENST00000315585 PLCG2P16885 1265 aa17■□□□□ 0.31
CHFR-202ENST00000315585 ERO1AQ96HE7 468 aa17■□□□□ 0.31
CHFR-202ENST00000315585 MAN1B1Q9UKM7 699 aa17■□□□□ 0.31
CHFR-202ENST00000315585 JAG2Q9Y219 1238 aa17■□□□□ 0.31
CHFR-202ENST00000315585 USP5P45974 858 aa16.99■□□□□ 0.31
CHFR-202ENST00000315585 TROAPQ12815 778 aa16.99■□□□□ 0.31
CHFR-202ENST00000315585 MORC3Q14149 939 aa16.99■□□□□ 0.31
CHFR-202ENST00000315585 FOXP4Q8IVH2 680 aaPredicted RBP16.99■□□□□ 0.31
CHFR-202ENST00000315585 HSD3B7Q9H2F3 369 aa16.99■□□□□ 0.31
CHFR-202ENST00000315585 FANCLQ9NW38 375 aa16.99■□□□□ 0.31
CHFR-202ENST00000315585 SERTAD1Q9UHV2 236 aa16.99■□□□□ 0.31
CHFR-202ENST00000315585 V9GY48 417 aaPredicted RBP16.99■□□□□ 0.31
CHFR-202ENST00000315585 SLC15A2Q16348 729 aa16.99■□□□□ 0.31
CHFR-202ENST00000315585 E4F1Q66K89 784 aaPredicted RBP16.99■□□□□ 0.31
CHFR-202ENST00000315585 EYA3Q99504 573 aa16.99■□□□□ 0.31
CHFR-202ENST00000315585 ZC3H12CQ9C0D7 883 aaKnown RBP16.99■□□□□ 0.31
CHFR-202ENST00000315585 SUGT1Q9Y2Z0 365 aa16.99■□□□□ 0.31
CHFR-202ENST00000315585 FAM205AQ6ZU69 1335 aa16.98■□□□□ 0.31
CHFR-202ENST00000315585 USP27XA6NNY8 438 aa16.98■□□□□ 0.31
CHFR-202ENST00000315585 UBE2Q2LH0YL09 131 aa16.98■□□□□ 0.31
CHFR-202ENST00000315585 SLFN14P0C7P3 912 aa16.98■□□□□ 0.31
CHFR-202ENST00000315585 ATP1A3P13637 1013 aa16.98■□□□□ 0.31
CHFR-202ENST00000315585 TMTC3Q6ZXV5 915 aa16.98■□□□□ 0.31
CHFR-202ENST00000315585 SPATA20Q8TB22 786 aa16.98■□□□□ 0.31
CHFR-202ENST00000315585 TSC1Q92574 1164 aa16.98■□□□□ 0.31
CHFR-202ENST00000315585 GPR101Q96P66 508 aaPredicted RBP16.98■□□□□ 0.31
CHFR-202ENST00000315585 RGS17Q9UGC6 210 aaPredicted RBP16.98■□□□□ 0.31
CHFR-202ENST00000315585 LTBP1Q14766 1721 aa16.98■□□□□ 0.31
CHFR-202ENST00000315585 ARHGAP6O43182 974 aa16.98■□□□□ 0.31
CHFR-202ENST00000315585 SLU7O95391 586 aaKnown RBP16.98■□□□□ 0.31
CHFR-202ENST00000315585 CALML3P27482 149 aa16.98■□□□□ 0.31
CHFR-202ENST00000315585 NCBP1Q09161 790 aaKnown RBP16.98■□□□□ 0.31
CHFR-202ENST00000315585 FUT2Q10981 343 aa16.98■□□□□ 0.31
CHFR-202ENST00000315585 PKN1Q16512 942 aa16.98■□□□□ 0.31
CHFR-202ENST00000315585 PPP4R3BQ5MIZ7 849 aa16.98■□□□□ 0.31
CHFR-202ENST00000315585 POTEAQ6S8J7 498 aa16.98■□□□□ 0.31
CHFR-202ENST00000315585 DPP8Q6V1X1 898 aaPredicted RBP16.98■□□□□ 0.31
CHFR-202ENST00000315585 PPP1R13BQ96KQ4 1090 aa16.98■□□□□ 0.31
CHFR-202ENST00000315585 GSDMAQ96QA5 445 aa16.98■□□□□ 0.31
CHFR-202ENST00000315585 CSRNP2Q9H175 543 aa16.98■□□□□ 0.31
CHFR-202ENST00000315585 VPS54Q9P1Q0 977 aa16.98■□□□□ 0.31
CHFR-202ENST00000315585 H0YIN7 160 aa16.97■□□□□ 0.31
CHFR-202ENST00000315585 STYK1Q6J9G0 422 aa16.97■□□□□ 0.31
CHFR-202ENST00000315585 CMTR1Q8N1G2 835 aaKnown RBP16.97■□□□□ 0.31
CHFR-202ENST00000315585 CTAGE1Q96RT6 745 aa16.97■□□□□ 0.31
CHFR-202ENST00000315585 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.97■□□□□ 0.31
CHFR-202ENST00000315585 LAMB1P07942 1786 aa16.97■□□□□ 0.31
CHFR-202ENST00000315585 ACTN4O43707 911 aaKnown RBP16.97■□□□□ 0.31
CHFR-202ENST00000315585 ATP2B1P20020 1258 aa16.97■□□□□ 0.31
CHFR-202ENST00000315585 GNAQP50148 359 aa16.97■□□□□ 0.31
CHFR-202ENST00000315585 PLCD1P51178 756 aa16.97■□□□□ 0.31
CHFR-202ENST00000315585 SF3B2Q13435 895 aaKnown RBP16.97■□□□□ 0.31
CHFR-202ENST00000315585 SPECC1Q5M775 1068 aa16.97■□□□□ 0.31
CHFR-202ENST00000315585 MFSD14BQ5SR56 506 aa16.97■□□□□ 0.31
CHFR-202ENST00000315585 HOMER1Q86YM7 354 aa16.97■□□□□ 0.31
CHFR-202ENST00000315585 FAM177A1Q8N128 213 aaPredicted RBP16.97■□□□□ 0.31
CHFR-202ENST00000315585 FAM163AQ96GL9 167 aaPredicted RBP16.97■□□□□ 0.31
CHFR-202ENST00000315585 CAMKK2Q96RR4 588 aa16.97■□□□□ 0.31
CHFR-202ENST00000315585 TMX1Q9H3N1 280 aa16.97■□□□□ 0.31
CHFR-202ENST00000315585 MCM9Q9NXL9 1143 aa16.97■□□□□ 0.31
CHFR-202ENST00000315585 NFE2L3Q9Y4A8 694 aa16.97■□□□□ 0.31
CHFR-202ENST00000315585 SPECC1LQ69YQ0 1117 aa16.96■□□□□ 0.31
CHFR-202ENST00000315585 OXER1Q8TDS5 423 aa16.96■□□□□ 0.31
CHFR-202ENST00000315585 SRRTQ9BXP5 876 aaKnown RBP16.96■□□□□ 0.31
CHFR-202ENST00000315585 G3V3G9 751 aa16.96■□□□□ 0.3
CHFR-202ENST00000315585 DCAF8Q5TAQ9 597 aa16.96■□□□□ 0.3
CHFR-202ENST00000315585 SMAP1Q8IYB5 467 aaPredicted RBP16.96■□□□□ 0.3
CHFR-202ENST00000315585 ZNF287Q9HBT7 754 aa16.96■□□□□ 0.3
CHFR-202ENST00000315585 SH3GLB2Q9NR46 395 aa16.96■□□□□ 0.3
CHFR-202ENST00000315585 MYH6P13533 1939 aa16.96■□□□□ 0.3
CHFR-202ENST00000315585 BAZ2AQ9UIF9 1905 aaKnown RBP16.96■□□□□ 0.3
CHFR-202ENST00000315585 QSER1Q2KHR3 1735 aa16.95■□□□□ 0.3
CHFR-202ENST00000315585 TSPY2A6NKD2 308 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms