RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 SUPT3HO75486 399 aa10.36□□□□□ -0.75
BDNF-201ENST00000314915 TSPY4P0CV99 314 aa10.36□□□□□ -0.75
BDNF-201ENST00000314915 TSPY10P0CW01 314 aa10.36□□□□□ -0.75
BDNF-201ENST00000314915 CCNG1P51959 295 aa10.36□□□□□ -0.75
BDNF-201ENST00000314915 TMEM53Q6P2H8 277 aa10.36□□□□□ -0.75
BDNF-201ENST00000314915 KRI1Q8N9T8 703 aaKnown RBP10.36□□□□□ -0.75
BDNF-201ENST00000314915 GIMAP1Q8WWP7 306 aa10.36□□□□□ -0.75
BDNF-201ENST00000314915 NAF1Q96HR8 494 aaKnown RBP10.36□□□□□ -0.75
BDNF-201ENST00000314915 RPGRIP1Q96KN7 1286 aa10.36□□□□□ -0.75
BDNF-201ENST00000314915 SCAND2PQ9GZW5 306 aaPredicted RBP10.36□□□□□ -0.75
BDNF-201ENST00000314915 EHD4Q9H223 541 aa10.36□□□□□ -0.75
BDNF-201ENST00000314915 RPAP3Q9H6T3 665 aaPredicted RBP10.36□□□□□ -0.75
BDNF-201ENST00000314915 BICDL2A1A5D9 508 aa10.35□□□□□ -0.75
BDNF-201ENST00000314915 CFAP73A6NFT4 308 aa10.35□□□□□ -0.75
BDNF-201ENST00000314915 PDGFRBP09619 1106 aa10.35□□□□□ -0.75
BDNF-201ENST00000314915 RHOXF2BP0C7M4 288 aa10.35□□□□□ -0.75
BDNF-201ENST00000314915 TOP1P11387 765 aaKnown RBP10.35□□□□□ -0.75
BDNF-201ENST00000314915 SULT2A1Q06520 285 aa10.35□□□□□ -0.75
BDNF-201ENST00000314915 ARHGEF6Q15052 776 aa10.35□□□□□ -0.75
BDNF-201ENST00000314915 CCDC153Q494R4 210 aa10.35□□□□□ -0.75
BDNF-201ENST00000314915 TTC22Q5TAA0 569 aa10.35□□□□□ -0.75
BDNF-201ENST00000314915 DEPTORQ8TB45 409 aa10.35□□□□□ -0.75
BDNF-201ENST00000314915 RHOXF2Q9BQY4 288 aa10.35□□□□□ -0.75
BDNF-201ENST00000314915 CLTCL1P53675 1640 aa10.35□□□□□ -0.75
BDNF-201ENST00000314915 STAT6P42226 847 aa10.35□□□□□ -0.75
BDNF-201ENST00000314915 SCTRP47872 440 aa10.35□□□□□ -0.75
BDNF-201ENST00000314915 ZNF132P52740 706 aa10.35□□□□□ -0.75
BDNF-201ENST00000314915 DNM1Q05193 864 aaKnown RBP10.35□□□□□ -0.75
BDNF-201ENST00000314915 EIF4A2Q14240 407 aaKnown RBP10.35□□□□□ -0.75
BDNF-201ENST00000314915 TAF11Q15544 211 aa10.35□□□□□ -0.75
BDNF-201ENST00000314915 TMCO4Q5TGY1 634 aa10.35□□□□□ -0.75
BDNF-201ENST00000314915 SLC7A5P1Q8MH63 180 aa10.35□□□□□ -0.75
BDNF-201ENST00000314915 WDR60Q8WVS4 1066 aa10.35□□□□□ -0.75
BDNF-201ENST00000314915 KIFC2Q96AC6 838 aa10.35□□□□□ -0.75
BDNF-201ENST00000314915 NACAP1Q9BZK3 213 aa10.35□□□□□ -0.75
BDNF-201ENST00000314915 FAM192AQ9GZU8 254 aa10.35□□□□□ -0.75
BDNF-201ENST00000314915 SIL1Q9H173 461 aa10.35□□□□□ -0.75
BDNF-201ENST00000314915 WDR46O15213 610 aaKnown RBP10.35□□□□□ -0.75
BDNF-201ENST00000314915 SART1O43290 800 aaKnown RBP10.35□□□□□ -0.75
BDNF-201ENST00000314915 FAM107AO95990 144 aa10.35□□□□□ -0.75
BDNF-201ENST00000314915 TUBA1BP68363 451 aa10.35□□□□□ -0.75
BDNF-201ENST00000314915 ITGA7Q13683 1181 aa10.35□□□□□ -0.75
BDNF-201ENST00000314915 HIBCHQ6NVY1 386 aaPredicted RBP10.35□□□□□ -0.75
BDNF-201ENST00000314915 TUBA1AQ71U36 451 aa10.35□□□□□ -0.75
BDNF-201ENST00000314915 TTC39CQ8N584 583 aa10.35□□□□□ -0.75
BDNF-201ENST00000314915 CTAGE1Q96RT6 745 aa10.35□□□□□ -0.75
BDNF-201ENST00000314915 WDR24Q96S15 920 aa10.35□□□□□ -0.75
BDNF-201ENST00000314915 FAM167BQ9BTA0 163 aa10.35□□□□□ -0.75
BDNF-201ENST00000314915 COL19A1Q14993 1142 aa10.34□□□□□ -0.75
BDNF-201ENST00000314915 GRAMD4Q6IC98 578 aa10.34□□□□□ -0.75
BDNF-201ENST00000314915 CNBD1Q8NA66 436 aa10.34□□□□□ -0.75
BDNF-201ENST00000314915 GABPB2Q8TAK5 448 aaPredicted RBP10.34□□□□□ -0.75
BDNF-201ENST00000314915 PUS3Q9BZE2 481 aaKnown RBP10.34□□□□□ -0.75
BDNF-201ENST00000314915 PIDD1Q9HB75 910 aa10.34□□□□□ -0.75
BDNF-201ENST00000314915 FANCGO15287 622 aa10.34□□□□□ -0.75
BDNF-201ENST00000314915 FGFR1OPO95684 399 aaKnown RBP10.34□□□□□ -0.75
BDNF-201ENST00000314915 EPB41P11171 864 aaKnown RBP10.34□□□□□ -0.75
BDNF-201ENST00000314915 S100A1P23297 94 aa10.34□□□□□ -0.75
BDNF-201ENST00000314915 GUCY2FP51841 1108 aa10.34□□□□□ -0.75
BDNF-201ENST00000314915 KLC1Q07866 573 aa10.34□□□□□ -0.75
BDNF-201ENST00000314915 RSPH9Q9H1X1 276 aaPredicted RBP10.34□□□□□ -0.75
BDNF-201ENST00000314915 DDX21Q9NR30 783 aaKnown RBP eCLIP10.34□□□□□ -0.75
BDNF-201ENST00000314915 EFR3BQ9Y2G0 817 aa10.34□□□□□ -0.75
BDNF-201ENST00000314915 TBKBP1A7MCY6 615 aa10.34□□□□□ -0.75
BDNF-201ENST00000314915 HSPA8P11142 646 aaKnown RBP10.34□□□□□ -0.75
BDNF-201ENST00000314915 CDC25CP30307 473 aa10.34□□□□□ -0.75
BDNF-201ENST00000314915 CD97P48960 835 aa10.34□□□□□ -0.75
BDNF-201ENST00000314915 PDE1BQ01064 536 aa10.34□□□□□ -0.75
BDNF-201ENST00000314915 PPP1R7Q15435 360 aa10.34□□□□□ -0.75
BDNF-201ENST00000314915 CMPK2Q5EBM0 449 aa10.34□□□□□ -0.75
BDNF-201ENST00000314915 ADALQ6DHV7 355 aa10.34□□□□□ -0.75
BDNF-201ENST00000314915 CCT8L2Q96SF2 557 aa10.34□□□□□ -0.75
BDNF-201ENST00000314915 LSP1P33241 339 aa10.34□□□□□ -0.75
BDNF-201ENST00000314915 ZMYM1Q5SVZ6 1142 aa10.34□□□□□ -0.75
BDNF-201ENST00000314915 NLRP14Q86W24 1093 aa10.34□□□□□ -0.75
BDNF-201ENST00000314915 CLMNQ96JQ2 1002 aa10.34□□□□□ -0.75
BDNF-201ENST00000314915 UPF3BQ9BZI7 483 aaKnown RBP10.34□□□□□ -0.75
BDNF-201ENST00000314915 DMRT2Q9Y5R5 561 aa10.34□□□□□ -0.75
BDNF-201ENST00000314915 IKBKGQ9Y6K9 419 aa10.34□□□□□ -0.75
BDNF-201ENST00000314915 NESP48681 1621 aa10.33□□□□□ -0.76
BDNF-201ENST00000314915 STAM2O75886 525 aa10.33□□□□□ -0.76
BDNF-201ENST00000314915 IFI16Q16666 785 aaKnown RBP10.33□□□□□ -0.76
BDNF-201ENST00000314915 SYT2Q8N9I0 419 aaPredicted RBP10.33□□□□□ -0.76
BDNF-201ENST00000314915 GINM1Q9NU53 330 aa10.33□□□□□ -0.76
BDNF-201ENST00000314915 RMND1Q9NWS8 449 aa10.33□□□□□ -0.76
BDNF-201ENST00000314915 FAM184BQ9ULE4 1060 aa10.33□□□□□ -0.76
BDNF-201ENST00000314915 KDM6BO15054 1643 aa10.33□□□□□ -0.76
BDNF-201ENST00000314915 TRIM64CA6NLI5 447 aa10.33□□□□□ -0.76
BDNF-201ENST00000314915 ACTN4O43707 911 aaKnown RBP10.33□□□□□ -0.76
BDNF-201ENST00000314915 GSPT1P15170 499 aaKnown RBP10.33□□□□□ -0.76
BDNF-201ENST00000314915 ADAM9Q13443 819 aa10.33□□□□□ -0.76
BDNF-201ENST00000314915 ALDH1L2Q3SY69 923 aa10.33□□□□□ -0.76
BDNF-201ENST00000314915 KANK3Q6NY19 840 aa10.33□□□□□ -0.76
BDNF-201ENST00000314915 MIS12Q9H081 205 aa10.33□□□□□ -0.76
BDNF-201ENST00000314915 MYPNQ86TC9 1320 aa10.33□□□□□ -0.76
BDNF-201ENST00000314915 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.33□□□□□ -0.76
BDNF-201ENST00000314915 LMNB1P20700 586 aa10.33□□□□□ -0.76
BDNF-201ENST00000314915 PDCLQ13371 301 aa10.33□□□□□ -0.76
BDNF-201ENST00000314915 EXOC3L1Q86VI1 746 aa10.33□□□□□ -0.76
BDNF-201ENST00000314915 CGREF1Q99674 301 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms