RNA–Protein interactions for RNA: ENST00000312912.9

KDM3A-201, Transcript of lysine demethylase 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM3A, Length 4,886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-201ENST00000312912 TFAP4Q01664 338 aa17.01■□□□□ 0.31
KDM3A-201ENST00000312912 BIRC3Q13489 604 aa17.01■□□□□ 0.31
KDM3A-201ENST00000312912 BIRC2Q13490 618 aa17.01■□□□□ 0.31
KDM3A-201ENST00000312912 REXO1Q8N1G1 1221 aaKnown RBP17.01■□□□□ 0.31
KDM3A-201ENST00000312912 ERCC5P28715 1186 aaPredicted RBP17.01■□□□□ 0.31
KDM3A-201ENST00000312912 LRMPQ12912 555 aa17.01■□□□□ 0.31
KDM3A-201ENST00000312912 RPS6KA1Q15418 735 aa17.01■□□□□ 0.31
KDM3A-201ENST00000312912 FAM212AQ96EL1 285 aa17.01■□□□□ 0.31
KDM3A-201ENST00000312912 TRIM7Q9C029 511 aa17.01■□□□□ 0.31
KDM3A-201ENST00000312912 PCDHA7Q9UN72 937 aa17.01■□□□□ 0.31
KDM3A-201ENST00000312912 AATKQ6ZMQ8 1374 aa17■□□□□ 0.31
KDM3A-201ENST00000312912 ARHGEF35A5YM69 484 aa17■□□□□ 0.31
KDM3A-201ENST00000312912 STX10O60499 249 aa17■□□□□ 0.31
KDM3A-201ENST00000312912 CALCRLQ16602 461 aa17■□□□□ 0.31
KDM3A-201ENST00000312912 LRRC8AQ8IWT6 810 aa17■□□□□ 0.31
KDM3A-201ENST00000312912 GGA1Q9UJY5 639 aa17■□□□□ 0.31
KDM3A-201ENST00000312912 TRPC5Q9UL62 973 aaPredicted RBP17■□□□□ 0.31
KDM3A-201ENST00000312912 DKC1O60832 514 aaKnown RBP eCLIP17■□□□□ 0.31
KDM3A-201ENST00000312912 ADKP55263 362 aaKnown RBP17■□□□□ 0.31
KDM3A-201ENST00000312912 FANCBQ8NB91 859 aa17■□□□□ 0.31
KDM3A-201ENST00000312912 CCNL1Q9UK58 526 aaPredicted RBP17■□□□□ 0.31
KDM3A-201ENST00000312912 MAGEA9P43362 315 aa17■□□□□ 0.31
KDM3A-201ENST00000312912 PPARAQ07869 468 aa17■□□□□ 0.31
KDM3A-201ENST00000312912 INTS8Q75QN2 995 aaKnown RBP17■□□□□ 0.31
KDM3A-201ENST00000312912 SND1Q7KZF4 910 aaKnown RBP eCLIP17■□□□□ 0.318e-9■■□□□ 13.3
KDM3A-201ENST00000312912 RASEFQ8IZ41 740 aa17■□□□□ 0.31
KDM3A-201ENST00000312912 SYCE1Q8N0S2 351 aa17■□□□□ 0.31
KDM3A-201ENST00000312912 CLEC11AQ9Y240 323 aa17■□□□□ 0.31
KDM3A-201ENST00000312912 RNASE9P60153 205 aaKnown RBP16.99■□□□□ 0.31
KDM3A-201ENST00000312912 SEC62Q99442 399 aaKnown RBP16.99■□□□□ 0.31
KDM3A-201ENST00000312912 IFIH1Q9BYX4 1025 aaKnown RBP16.99■□□□□ 0.31
KDM3A-201ENST00000312912 NT5C3AQ9H0P0 336 aa16.99■□□□□ 0.31
KDM3A-201ENST00000312912 EXOC7Q9UPT5 735 aa16.99■□□□□ 0.31
KDM3A-201ENST00000312912 PSDA5PKW4 1024 aaPredicted RBP16.99■□□□□ 0.31
KDM3A-201ENST00000312912 FGAP02671 866 aa16.99■□□□□ 0.31
KDM3A-201ENST00000312912 ERCC3P19447 782 aa16.99■□□□□ 0.31
KDM3A-201ENST00000312912 DNM2P50570 870 aa16.99■□□□□ 0.31
KDM3A-201ENST00000312912 SFMBT2Q5VUG0 894 aa16.99■□□□□ 0.31
KDM3A-201ENST00000312912 DYMQ7RTS9 669 aa16.99■□□□□ 0.31
KDM3A-201ENST00000312912 PSMD1Q99460 953 aa16.99■□□□□ 0.31
KDM3A-201ENST00000312912 KCNQ3O43525 872 aa16.99■□□□□ 0.31
KDM3A-201ENST00000312912 LUC7L3O95232 432 aaKnown RBP16.99■□□□□ 0.31
KDM3A-201ENST00000312912 SLC1A4P43007 532 aa16.99■□□□□ 0.31
KDM3A-201ENST00000312912 FAM98CQ17RN3 349 aaKnown RBP16.99■□□□□ 0.31
KDM3A-201ENST00000312912 TRIM4Q9C037 500 aa16.99■□□□□ 0.31
KDM3A-201ENST00000312912 PDE6AP16499 860 aa16.99■□□□□ 0.31
KDM3A-201ENST00000312912 IFNL3Q8IZI9 196 aa16.99■□□□□ 0.31
KDM3A-201ENST00000312912 TRIM58Q8NG06 486 aa16.99■□□□□ 0.31
KDM3A-201ENST00000312912 TDRD7Q8NHU6 1098 aaKnown RBP16.99■□□□□ 0.31
KDM3A-201ENST00000312912 ARHGEF10LQ9HCE6 1279 aa16.99■□□□□ 0.31
KDM3A-201ENST00000312912 ZMYM6O95789 1325 aa16.99■□□□□ 0.31
KDM3A-201ENST00000312912 PABPN1LA6NDY0 278 aaKnown RBP16.98■□□□□ 0.31
KDM3A-201ENST00000312912 H7C1D1 291 aa16.98■□□□□ 0.31
KDM3A-201ENST00000312912 HAUS4Q9H6D7 363 aa16.98■□□□□ 0.31
KDM3A-201ENST00000312912 YEATS2Q9ULM3 1422 aa16.98■□□□□ 0.31
KDM3A-201ENST00000312912 EFCAB8A8MWE9 144 aa16.98■□□□□ 0.31
KDM3A-201ENST00000312912 KRT5P13647 590 aa16.98■□□□□ 0.31
KDM3A-201ENST00000312912 SNCBQ16143 134 aa16.98■□□□□ 0.31
KDM3A-201ENST00000312912 LIN9Q5TKA1 542 aa16.98■□□□□ 0.31
KDM3A-201ENST00000312912 RABEP2Q9H5N1 569 aa16.98■□□□□ 0.31
KDM3A-201ENST00000312912 ARPP21Q9UBL0 812 aaPredicted RBP16.98■□□□□ 0.31
KDM3A-201ENST00000312912 GNA14O95837 355 aa16.98■□□□□ 0.31
KDM3A-201ENST00000312912 RTEL1Q9NZ71 1219 aa16.98■□□□□ 0.31
KDM3A-201ENST00000312912 SSX2IPQ9Y2D8 614 aa16.98■□□□□ 0.31
KDM3A-201ENST00000312912 RIPOR2Q9Y4F9 1068 aa16.98■□□□□ 0.31
KDM3A-201ENST00000312912 USP17L12C9JPN9 530 aa16.98■□□□□ 0.31
KDM3A-201ENST00000312912 USP17L21D6R901 530 aa16.98■□□□□ 0.31
KDM3A-201ENST00000312912 MYCNP04198 464 aaPredicted RBP16.98■□□□□ 0.31
KDM3A-201ENST00000312912 PDIA3P30101 505 aaKnown RBP16.98■□□□□ 0.31
KDM3A-201ENST00000312912 MTMR3Q13615 1198 aa16.98■□□□□ 0.31
KDM3A-201ENST00000312912 BLZF1Q9H2G9 400 aa16.98■□□□□ 0.31
KDM3A-201ENST00000312912 ANTXR1Q9H6X2 564 aa16.98■□□□□ 0.31
KDM3A-201ENST00000312912 FAM114A2Q9NRY5 505 aa16.98■□□□□ 0.31
KDM3A-201ENST00000312912 CTTNBP2NLQ9P2B4 639 aa16.98■□□□□ 0.31
KDM3A-201ENST00000312912 CCDC14Q49A88 953 aa16.97■□□□□ 0.31
KDM3A-201ENST00000312912 LRRC23Q53EV4 343 aaPredicted RBP16.97■□□□□ 0.31
KDM3A-201ENST00000312912 TBC1D22AQ8WUA7 517 aa16.97■□□□□ 0.31
KDM3A-201ENST00000312912 EXOC4Q96A65 974 aa16.97■□□□□ 0.31
KDM3A-201ENST00000312912 GPR108Q9NPR9 543 aa16.97■□□□□ 0.31
KDM3A-201ENST00000312912 FAM169AQ9Y6X4 670 aa16.97■□□□□ 0.31
KDM3A-201ENST00000312912 NPHP4O75161 1426 aaPredicted RBP16.97■□□□□ 0.31
KDM3A-201ENST00000312912 hCG_1642624A0A1W2PR95 340 aa16.97■□□□□ 0.31
KDM3A-201ENST00000312912 LONRF3Q496Y0 759 aa16.97■□□□□ 0.31
KDM3A-201ENST00000312912 RRAGAQ7L523 313 aa16.97■□□□□ 0.31
KDM3A-201ENST00000312912 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.97■□□□□ 0.31
KDM3A-201ENST00000312912 N4BP2L2Q92802 583 aaPredicted RBP16.97■□□□□ 0.31
KDM3A-201ENST00000312912 PPP2R2CQ9Y2T4 447 aa16.97■□□□□ 0.31
KDM3A-201ENST00000312912 MAP7Q14244 749 aa16.97■□□□□ 0.31
KDM3A-201ENST00000312912 SPATA1Q5VX52 437 aa16.97■□□□□ 0.31
KDM3A-201ENST00000312912 PEX26Q7Z412 305 aa16.97■□□□□ 0.31
KDM3A-201ENST00000312912 GBP5Q96PP8 586 aa16.97■□□□□ 0.31
KDM3A-201ENST00000312912 FAM207AQ9NSI2 230 aaPredicted RBP16.97■□□□□ 0.31
KDM3A-201ENST00000312912 FANCLQ9NW38 375 aa16.97■□□□□ 0.31
KDM3A-201ENST00000312912 TMEM94Q12767 1356 aa16.97■□□□□ 0.31
KDM3A-201ENST00000312912 CTSWP56202 376 aa16.97■□□□□ 0.31
KDM3A-201ENST00000312912 EIF6P56537 245 aaKnown RBP16.97■□□□□ 0.31
KDM3A-201ENST00000312912 NCAPH2Q6IBW4 605 aa16.97■□□□□ 0.31
KDM3A-201ENST00000312912 STMN2Q93045 179 aa16.97■□□□□ 0.31
KDM3A-201ENST00000312912 SERPINA10Q9UK55 444 aa16.97■□□□□ 0.31
KDM3A-201ENST00000312912 CCDC169A6NNP5 214 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms