RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 STX10O60499 249 aa28.82■■■□□ 2.2
HOXB3-201ENST00000311626 CASQ1P31415 396 aa28.82■■■□□ 2.2
HOXB3-201ENST00000311626 CUL4BQ13620 913 aa28.82■■■□□ 2.2
HOXB3-201ENST00000311626 CACNA1SQ13698 1873 aa28.82■■■□□ 2.2
HOXB3-201ENST00000311626 TBC1D9BQ66K14 1250 aa28.82■■■□□ 2.2
HOXB3-201ENST00000311626 A0A1B0GTH6 734 aa28.81■■■□□ 2.2
HOXB3-201ENST00000311626 CCT6AP40227 531 aaKnown RBP28.81■■■□□ 2.2
HOXB3-201ENST00000311626 NLRP5P59047 1200 aa28.81■■■□□ 2.2
HOXB3-201ENST00000311626 IL17AQ16552 155 aa28.81■■■□□ 2.2
HOXB3-201ENST00000311626 LZTFL1Q9NQ48 299 aa28.81■■■□□ 2.2
HOXB3-201ENST00000311626 MAPK8IP1Q9UQF2 711 aa28.81■■■□□ 2.2
HOXB3-201ENST00000311626 ZNF652Q9Y2D9 606 aa28.81■■■□□ 2.2
HOXB3-201ENST00000311626 SEC31AO94979 1220 aaKnown RBP28.81■■■□□ 2.2
HOXB3-201ENST00000311626 PTF1AQ7RTS3 328 aa28.81■■■□□ 2.2
HOXB3-201ENST00000311626 SH3RF1Q7Z6J0 888 aa28.81■■■□□ 2.2
HOXB3-201ENST00000311626 DUOX1Q9NRD9 1551 aa28.81■■■□□ 2.2
HOXB3-201ENST00000311626 PPP1R3GB7ZBB8 358 aa28.8■■■□□ 2.2
HOXB3-201ENST00000311626 SPATA1Q5VX52 437 aa28.8■■■□□ 2.2
HOXB3-201ENST00000311626 TXNRD3Q86VQ6 643 aa28.8■■■□□ 2.2
HOXB3-201ENST00000311626 IGSF22Q8N9C0 903 aa28.8■■■□□ 2.2
HOXB3-201ENST00000311626 DCP1AQ9NPI6 582 aaPredicted RBP28.8■■■□□ 2.2
HOXB3-201ENST00000311626 ERCC5P28715 1186 aaPredicted RBP28.8■■■□□ 2.2
HOXB3-201ENST00000311626 RASGRP4Q8TDF6 673 aa28.8■■■□□ 2.2
HOXB3-201ENST00000311626 MYH13Q9UKX3 1938 aa28.8■■■□□ 2.2
HOXB3-201ENST00000311626 AKR1B15C9JRZ8 316 aaPredicted RBP28.79■■■□□ 2.2
HOXB3-201ENST00000311626 TADA3O75528 432 aa28.79■■■□□ 2.2
HOXB3-201ENST00000311626 RAD9BQ6WBX8 426 aa28.79■■■□□ 2.2
HOXB3-201ENST00000311626 CTCFLQ8NI51 663 aaPredicted RBP28.79■■■□□ 2.2
HOXB3-201ENST00000311626 GPKOWQ92917 476 aaPredicted RBP eCLIP28.79■■■□□ 2.29e-6■■□□□ 14.5
HOXB3-201ENST00000311626 BRMS1Q9HCU9 246 aa28.79■■■□□ 2.2
HOXB3-201ENST00000311626 RBM28Q9NW13 759 aaKnown RBP28.79■■■□□ 2.2
HOXB3-201ENST00000311626 SRP68Q9UHB9 627 aaKnown RBP28.79■■■□□ 2.2
HOXB3-201ENST00000311626 XDHP47989 1333 aa28.79■■■□□ 2.2
HOXB3-201ENST00000311626 FCHSD1Q86WN1 690 aa28.79■■■□□ 2.2
HOXB3-201ENST00000311626 ZSWIM4Q9H7M6 989 aa28.79■■■□□ 2.2
HOXB3-201ENST00000311626 COL16A1Q07092 1604 aaPredicted RBP28.79■■■□□ 2.2
HOXB3-201ENST00000311626 KDM4FA0A1W2PPD8 638 aa28.78■■■□□ 2.2
HOXB3-201ENST00000311626 TUBB4AP04350 444 aa28.78■■■□□ 2.2
HOXB3-201ENST00000311626 USP17L8P0C7I0 530 aa28.78■■■□□ 2.2
HOXB3-201ENST00000311626 SF3B3Q15393 1217 aaKnown RBP28.78■■■□□ 2.2
HOXB3-201ENST00000311626 MTRQ99707 1265 aa28.78■■■□□ 2.2
HOXB3-201ENST00000311626 DDX52Q9Y2R4 599 aaKnown RBP eCLIP28.77■■■□□ 2.2
HOXB3-201ENST00000311626 FHOD1Q9Y613 1164 aa28.77■■■□□ 2.2
HOXB3-201ENST00000311626 TSPY2A6NKD2 308 aa28.77■■■□□ 2.2
HOXB3-201ENST00000311626 PPP2R5BQ15173 497 aa28.77■■■□□ 2.2
HOXB3-201ENST00000311626 FERMT2Q96AC1 680 aa28.77■■■□□ 2.2
HOXB3-201ENST00000311626 TEX35Q5T0J7 233 aa28.76■■■□□ 2.2
HOXB3-201ENST00000311626 RRAGBQ5VZM2 374 aa28.76■■■□□ 2.2
HOXB3-201ENST00000311626 FBXO33Q7Z6M2 555 aa28.76■■■□□ 2.2
HOXB3-201ENST00000311626 PPFIBP1Q86W92 1011 aa28.76■■■□□ 2.2
HOXB3-201ENST00000311626 FAM53CQ9NYF3 392 aa28.76■■■□□ 2.2
HOXB3-201ENST00000311626 ADD3Q9UEY8 706 aaKnown RBP28.76■■■□□ 2.2
HOXB3-201ENST00000311626 ZBTB9Q96C00 473 aa28.76■■■□□ 2.19
HOXB3-201ENST00000311626 SCG2P13521 617 aa28.75■■■□□ 2.19
HOXB3-201ENST00000311626 CASP14P31944 242 aa28.75■■■□□ 2.19
HOXB3-201ENST00000311626 ATP2C1P98194 919 aaPredicted RBP28.75■■■□□ 2.19
HOXB3-201ENST00000311626 KIFC2Q96AC6 838 aa28.75■■■□□ 2.19
HOXB3-201ENST00000311626 DYNLL2Q96FJ2 89 aa28.75■■■□□ 2.19
HOXB3-201ENST00000311626 VPS16Q9H269 839 aa28.75■■■□□ 2.19
HOXB3-201ENST00000311626 CCDC12Q8WUD4 166 aaPredicted RBP28.75■■■□□ 2.19
HOXB3-201ENST00000311626 PLIN2Q99541 437 aa28.75■■■□□ 2.19
HOXB3-201ENST00000311626 DDAH1O94760 285 aa28.74■■■□□ 2.19
HOXB3-201ENST00000311626 FGRP09769 529 aa28.74■■■□□ 2.19
HOXB3-201ENST00000311626 STAG2Q8N3U4 1231 aa28.74■■■□□ 2.19
HOXB3-201ENST00000311626 MCM9Q9NXL9 1143 aa28.74■■■□□ 2.19
HOXB3-201ENST00000311626 CALM1P0DP23 149 aa28.74■■■□□ 2.19
HOXB3-201ENST00000311626 CALM2P0DP24 149 aa28.74■■■□□ 2.19
HOXB3-201ENST00000311626 CALM3P0DP25 149 aa28.74■■■□□ 2.19
HOXB3-201ENST00000311626 HIBADHP31937 336 aaKnown RBP28.74■■■□□ 2.19
HOXB3-201ENST00000311626 RPS8P62241 208 aaKnown RBP28.74■■■□□ 2.19
HOXB3-201ENST00000311626 CRNKL1Q9BZJ0 848 aaKnown RBP28.74■■■□□ 2.19
HOXB3-201ENST00000311626 ABL1P00519 1130 aa28.73■■■□□ 2.19
HOXB3-201ENST00000311626 FXR1P51114 621 aaKnown RBP eCLIP28.73■■■□□ 2.19
HOXB3-201ENST00000311626 CDKAL1Q5VV42 579 aa28.73■■■□□ 2.19
HOXB3-201ENST00000311626 FAM205AQ6ZU69 1335 aa28.73■■■□□ 2.19
HOXB3-201ENST00000311626 RNF225M0QZC1 329 aaPredicted RBP28.73■■■□□ 2.19
HOXB3-201ENST00000311626 PNMA6AP0CW24 399 aaPredicted RBP28.73■■■□□ 2.19
HOXB3-201ENST00000311626 MAP3K9P80192 1104 aa28.73■■■□□ 2.19
HOXB3-201ENST00000311626 PPP2R3AQ06190 1150 aa28.73■■■□□ 2.19
HOXB3-201ENST00000311626 GSDMAQ96QA5 445 aa28.73■■■□□ 2.19
HOXB3-201ENST00000311626 E2F4Q16254 413 aa28.73■■■□□ 2.19
HOXB3-201ENST00000311626 RCSD1Q6JBY9 416 aa28.73■■■□□ 2.19
HOXB3-201ENST00000311626 CCDC34Q96HJ3 373 aa28.73■■■□□ 2.19
HOXB3-201ENST00000311626 TAB2Q9NYJ8 693 aa28.73■■■□□ 2.19
HOXB3-201ENST00000311626 PP2D1A8MPX8 630 aa28.72■■■□□ 2.19
HOXB3-201ENST00000311626 TFRCP02786 760 aaKnown RBP28.72■■■□□ 2.19
HOXB3-201ENST00000311626 BMS1Q14692 1282 aaKnown RBP28.72■■■□□ 2.19
HOXB3-201ENST00000311626 GDAQ9Y2T3 454 aa28.72■■■□□ 2.19
HOXB3-201ENST00000311626 TERF2Q15554 542 aa28.72■■■□□ 2.19
HOXB3-201ENST00000311626 MRFAP1Q9Y605 127 aa28.72■■■□□ 2.19
HOXB3-201ENST00000311626 PDXDC2PQ6P474 469 aa28.71■■■□□ 2.19
HOXB3-201ENST00000311626 ADGRG1Q9Y653 693 aa28.71■■■□□ 2.19
HOXB3-201ENST00000311626 EFCAB8A8MWE9 144 aa28.71■■■□□ 2.19
HOXB3-201ENST00000311626 PBX1P40424 430 aa28.71■■■□□ 2.19
HOXB3-201ENST00000311626 TFAP4Q01664 338 aa28.71■■■□□ 2.19
HOXB3-201ENST00000311626 GABPB1Q06547 395 aaPredicted RBP28.71■■■□□ 2.19
HOXB3-201ENST00000311626 KRT31Q15323 416 aa28.71■■■□□ 2.19
HOXB3-201ENST00000311626 CLEC4GQ6UXB4 293 aa28.71■■■□□ 2.19
HOXB3-201ENST00000311626 IQUBQ8NA54 791 aa28.71■■■□□ 2.19
HOXB3-201ENST00000311626 ACRBPQ8NEB7 543 aa28.71■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms