RNA–Protein interactions for RNA: ENST00000309828.4

EIF3F-201, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3F, Length 1,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-201ENST00000309828 ZNF396Q96N95 335 aaPredicted RBP16.34■□□□□ 0.21
EIF3F-201ENST00000309828 SCAND2PQ9GZW5 306 aaPredicted RBP16.34■□□□□ 0.21
EIF3F-201ENST00000309828 CLIP2Q9UDT6 1046 aa16.34■□□□□ 0.21
EIF3F-201ENST00000309828 CFAP45Q9UL16 551 aa16.34■□□□□ 0.21
EIF3F-201ENST00000309828 FAM196BA6NMK8 535 aa16.33■□□□□ 0.2
EIF3F-201ENST00000309828 PRPF40AO75400 957 aaKnown RBP16.33■□□□□ 0.2
EIF3F-201ENST00000309828 SNHG28P0DPA3 235 aa16.33■□□□□ 0.2
EIF3F-201ENST00000309828 GUCY1B3Q02153 619 aa16.33■□□□□ 0.2
EIF3F-201ENST00000309828 KIF23Q02241 960 aaPredicted RBP16.33■□□□□ 0.2
EIF3F-201ENST00000309828 SAFBQ15424 915 aaKnown RBP eCLIP16.33■□□□□ 0.2
EIF3F-201ENST00000309828 TBC1D10BQ4KMP7 808 aaPredicted RBP16.33■□□□□ 0.2
EIF3F-201ENST00000309828 SAMD7Q7Z3H4 446 aa16.33■□□□□ 0.2
EIF3F-201ENST00000309828 APOBEC3FQ8IUX4 373 aaKnown RBP16.33■□□□□ 0.2
EIF3F-201ENST00000309828 CMTR1Q8N1G2 835 aaKnown RBP16.33■□□□□ 0.2
EIF3F-201ENST00000309828 CCDC82Q8N4S0 544 aa16.33■□□□□ 0.2
EIF3F-201ENST00000309828 HOOK2Q96ED9 719 aa16.33■□□□□ 0.2
EIF3F-201ENST00000309828 AIFM3Q96NN9 605 aa16.33■□□□□ 0.2
EIF3F-201ENST00000309828 SPZ1Q9BXG8 430 aa16.33■□□□□ 0.2
EIF3F-201ENST00000309828 TMEM39BQ9GZU3 492 aa16.33■□□□□ 0.2
EIF3F-201ENST00000309828 RNF181Q9P0P0 153 aa16.33■□□□□ 0.2
EIF3F-201ENST00000309828 CNPY2Q9Y2B0 182 aa16.33■□□□□ 0.2
EIF3F-201ENST00000309828 V9GY48 417 aaPredicted RBP16.33■□□□□ 0.2
EIF3F-201ENST00000309828 ELP1O95163 1332 aa16.32■□□□□ 0.2
EIF3F-201ENST00000309828 MBD3O95983 291 aa16.32■□□□□ 0.2
EIF3F-201ENST00000309828 MMP1P03956 469 aa16.32■□□□□ 0.2
EIF3F-201ENST00000309828 NCLP19338 710 aaKnown RBP16.32■□□□□ 0.2
EIF3F-201ENST00000309828 GUCY1A2P33402 732 aa16.32■□□□□ 0.2
EIF3F-201ENST00000309828 RASA3Q14644 834 aa16.32■□□□□ 0.2
EIF3F-201ENST00000309828 PKN1Q16512 942 aa16.32■□□□□ 0.2
EIF3F-201ENST00000309828 PFKFB3Q16875 520 aaPredicted RBP16.32■□□□□ 0.2
EIF3F-201ENST00000309828 KLHL40Q2TBA0 621 aa16.32■□□□□ 0.2
EIF3F-201ENST00000309828 FOXD4L6Q3SYB3 417 aaPredicted RBP16.32■□□□□ 0.2
EIF3F-201ENST00000309828 FOXD4L3Q6VB84 417 aaPredicted RBP16.32■□□□□ 0.2
EIF3F-201ENST00000309828 GINM1Q9NU53 330 aa16.32■□□□□ 0.2
EIF3F-201ENST00000309828 HACL1Q9UJ83 578 aa16.32■□□□□ 0.2
EIF3F-201ENST00000309828 ZC3H4Q9UPT8 1303 aaKnown RBP16.32■□□□□ 0.2
EIF3F-201ENST00000309828 KLRF2D3W0D1 207 aa16.31■□□□□ 0.2
EIF3F-201ENST00000309828 EGFRP00533 1210 aa16.31■□□□□ 0.2
EIF3F-201ENST00000309828 PDHBP11177 359 aa16.31■□□□□ 0.2
EIF3F-201ENST00000309828 SCG2P13521 617 aa16.31■□□□□ 0.2
EIF3F-201ENST00000309828 U2AF2P26368 475 aaKnown RBP eCLIP16.31■□□□□ 0.2
EIF3F-201ENST00000309828 ICA1Q05084 483 aa16.31■□□□□ 0.2
EIF3F-201ENST00000309828 GPATCH4Q5T3I0 446 aaKnown RBP16.31■□□□□ 0.2
EIF3F-201ENST00000309828 OTUD7BQ6GQQ9 843 aa16.31■□□□□ 0.2
EIF3F-201ENST00000309828 USP48Q86UV5 1035 aa16.31■□□□□ 0.2
EIF3F-201ENST00000309828 STAG2Q8N3U4 1231 aa16.31■□□□□ 0.2
EIF3F-201ENST00000309828 CHAMP1Q96JM3 812 aa16.31■□□□□ 0.2
EIF3F-201ENST00000309828 SH3GLB2Q9NR46 395 aa16.31■□□□□ 0.2
EIF3F-201ENST00000309828 PPP2R3BQ9Y5P8 575 aa16.31■□□□□ 0.2
EIF3F-201ENST00000309828 GRIN3BO60391 1043 aa16.3■□□□□ 0.2
EIF3F-201ENST00000309828 EEF2P13639 858 aaKnown RBP16.3■□□□□ 0.2
EIF3F-201ENST00000309828 LMOD1P29536 600 aaPredicted RBP16.3■□□□□ 0.2
EIF3F-201ENST00000309828 GNL2Q13823 731 aaKnown RBP16.3■□□□□ 0.2
EIF3F-201ENST00000309828 SEPT2Q15019 361 aa16.3■□□□□ 0.2
EIF3F-201ENST00000309828 C9orf131Q5VYM1 1079 aa16.3■□□□□ 0.2
EIF3F-201ENST00000309828 LRRC47Q8N1G4 583 aaKnown RBP16.3■□□□□ 0.2
EIF3F-201ENST00000309828 GMCL1P1Q8NEA9 526 aa16.3■□□□□ 0.2
EIF3F-201ENST00000309828 DCAF4Q8WV16 495 aa16.3■□□□□ 0.2
EIF3F-201ENST00000309828 TEPSINQ96N21 525 aa16.3■□□□□ 0.2
EIF3F-201ENST00000309828 FOXP1Q9H334 677 aaPredicted RBP16.3■□□□□ 0.2
EIF3F-201ENST00000309828 DDX49Q9Y6V7 483 aaKnown RBP16.3■□□□□ 0.2
EIF3F-201ENST00000309828 MYH15Q9Y2K3 1946 aa16.29■□□□□ 0.2
EIF3F-201ENST00000309828 PITPNM2Q9BZ72 1349 aa16.29■□□□□ 0.2
EIF3F-201ENST00000309828 USP17L5A8MUK1 530 aa16.29■□□□□ 0.2
EIF3F-201ENST00000309828 FIBPO43427 364 aa16.29■□□□□ 0.2
EIF3F-201ENST00000309828 GDF11O95390 407 aa16.29■□□□□ 0.2
EIF3F-201ENST00000309828 GH2P01242 217 aa16.29■□□□□ 0.2
EIF3F-201ENST00000309828 SLURP2P0DP57 97 aa16.29■□□□□ 0.2
EIF3F-201ENST00000309828 UBE2HP62256 183 aa16.29■□□□□ 0.2
EIF3F-201ENST00000309828 ZNF543Q08ER8 600 aa16.29■□□□□ 0.2
EIF3F-201ENST00000309828 FAM173BQ6P4H8 233 aa16.29■□□□□ 0.2
EIF3F-201ENST00000309828 USP17L2Q6R6M4 530 aa16.29■□□□□ 0.2
EIF3F-201ENST00000309828 PHF20Q9BVI0 1012 aa16.29■□□□□ 0.2
EIF3F-201ENST00000309828 RIOX1Q9H6W3 641 aa16.29■□□□□ 0.2
EIF3F-201ENST00000309828 ARHGEF10LQ9HCE6 1279 aa16.29■□□□□ 0.2
EIF3F-201ENST00000309828 BRMS1Q9HCU9 246 aa16.29■□□□□ 0.2
EIF3F-201ENST00000309828 GJB4Q9NTQ9 266 aa16.29■□□□□ 0.2
EIF3F-201ENST00000309828 MYH6P13533 1939 aa16.29■□□□□ 0.2
EIF3F-201ENST00000309828 UBE2Q2LH0YL09 131 aa16.28■□□□□ 0.2
EIF3F-201ENST00000309828 hCG_1984214I3L0E3 225 aa16.28■□□□□ 0.2
EIF3F-201ENST00000309828 CAP2P40123 477 aa16.28■□□□□ 0.2
EIF3F-201ENST00000309828 ATP2B2Q01814 1243 aa16.28■□□□□ 0.2
EIF3F-201ENST00000309828 RRP1BQ14684 758 aaKnown RBP16.28■□□□□ 0.2
EIF3F-201ENST00000309828 GPR162Q16538 588 aa16.28■□□□□ 0.2
EIF3F-201ENST00000309828 MYSM1Q5VVJ2 828 aa16.28■□□□□ 0.2
EIF3F-201ENST00000309828 DCAF15Q66K64 600 aa16.28■□□□□ 0.2
EIF3F-201ENST00000309828 DPY19L2Q6NUT2 758 aa16.28■□□□□ 0.2
EIF3F-201ENST00000309828 CLEC10AQ8IUN9 316 aa16.28■□□□□ 0.2
EIF3F-201ENST00000309828 SIAH1Q8IUQ4 282 aa16.28■□□□□ 0.2
EIF3F-201ENST00000309828 DIS3L2Q8IYB7 885 aaKnown RBP16.28■□□□□ 0.2
EIF3F-201ENST00000309828 ZNF713Q8N859 430 aaPredicted RBP16.28■□□□□ 0.2
EIF3F-201ENST00000309828 RRP36Q96EU6 259 aaKnown RBP16.28■□□□□ 0.2
EIF3F-201ENST00000309828 SPATA32Q96LK8 384 aa16.28■□□□□ 0.2
EIF3F-201ENST00000309828 DEFB129Q9H1M3 183 aa16.28■□□□□ 0.2
EIF3F-201ENST00000309828 ADARB2Q9NS39 739 aaKnown RBP16.28■□□□□ 0.2
EIF3F-201ENST00000309828 ZBTB21Q9ULJ3 1066 aa16.28■□□□□ 0.2
EIF3F-201ENST00000309828 MYH4Q9Y623 1939 aa16.27■□□□□ 0.2
EIF3F-201ENST00000309828 KIF28PB7ZC32 967 aa16.27■□□□□ 0.2
EIF3F-201ENST00000309828 CYTH3O43739 400 aa16.27■□□□□ 0.2
EIF3F-201ENST00000309828 DDNO94850 711 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms