RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 MYH4Q9Y623 1939 aa8.11□□□□□ -1.11
PTCD2-201ENST00000308077 PLEKHA8P1O95397 391 aa8.11□□□□□ -1.11
PTCD2-201ENST00000308077 FUT2Q10981 343 aa8.11□□□□□ -1.11
PTCD2-201ENST00000308077 FOXD4L6Q3SYB3 417 aaPredicted RBP8.11□□□□□ -1.11
PTCD2-201ENST00000308077 CCDC178Q5BJE1 867 aa8.11□□□□□ -1.11
PTCD2-201ENST00000308077 FOXD4L3Q6VB84 417 aaPredicted RBP8.11□□□□□ -1.11
PTCD2-201ENST00000308077 SAMD7Q7Z3H4 446 aa8.11□□□□□ -1.11
PTCD2-201ENST00000308077 CLEC10AQ8IUN9 316 aa8.11□□□□□ -1.11
PTCD2-201ENST00000308077 CDAN1Q8IWY9 1227 aa8.11□□□□□ -1.11
PTCD2-201ENST00000308077 PNMA1Q8ND90 353 aa8.11□□□□□ -1.11
PTCD2-201ENST00000308077 FAM151AQ8WW52 585 aa8.11□□□□□ -1.11
PTCD2-201ENST00000308077 AIFM3Q96NN9 605 aa8.11□□□□□ -1.11
PTCD2-201ENST00000308077 TMEM47Q9BQJ4 181 aa8.11□□□□□ -1.11
PTCD2-201ENST00000308077 KAT14Q9H8E8 782 aa8.11□□□□□ -1.11
PTCD2-201ENST00000308077 PGAP2Q9UHJ9 254 aa8.11□□□□□ -1.11
PTCD2-201ENST00000308077 CNOT7Q9UIV1 285 aaKnown RBP8.11□□□□□ -1.11
PTCD2-201ENST00000308077 ASTN2O75129 1339 aaPredicted RBP8.11□□□□□ -1.11
PTCD2-201ENST00000308077 STK36Q9NRP7 1315 aa8.11□□□□□ -1.11
PTCD2-201ENST00000308077 RASSF10A6NK89 507 aa8.1□□□□□ -1.11
PTCD2-201ENST00000308077 CDKL5O76039 1030 aa8.1□□□□□ -1.11
PTCD2-201ENST00000308077 FMNL1O95466 1100 aaPredicted RBP8.1□□□□□ -1.11
PTCD2-201ENST00000308077 GUCY1A2P33402 732 aa8.1□□□□□ -1.11
PTCD2-201ENST00000308077 MMP14P50281 582 aa8.1□□□□□ -1.11
PTCD2-201ENST00000308077 MAP3K11Q16584 847 aa8.1□□□□□ -1.11
PTCD2-201ENST00000308077 RBM26Q5T8P6 1007 aaKnown RBP8.1□□□□□ -1.11
PTCD2-201ENST00000308077 FKBP1CQ5VVH2 108 aa8.1□□□□□ -1.11
PTCD2-201ENST00000308077 MCTP1Q6DN14 999 aa8.1□□□□□ -1.11
PTCD2-201ENST00000308077 OTUD7BQ6GQQ9 843 aa8.1□□□□□ -1.11
PTCD2-201ENST00000308077 TATDN1Q6P1N9 297 aa8.1□□□□□ -1.11
PTCD2-201ENST00000308077 RASGRP2Q7LDG7 609 aa8.1□□□□□ -1.11
PTCD2-201ENST00000308077 FERMT3Q86UX7 667 aa8.1□□□□□ -1.11
PTCD2-201ENST00000308077 CRACR2BQ8N4Y2 399 aaPredicted RBP8.1□□□□□ -1.11
PTCD2-201ENST00000308077 CSRNP1Q96S65 589 aa8.1□□□□□ -1.11
PTCD2-201ENST00000308077 SLC26A6Q9BXS9 759 aa8.1□□□□□ -1.11
PTCD2-201ENST00000308077 TMEM39BQ9GZU3 492 aa8.1□□□□□ -1.11
PTCD2-201ENST00000308077 GJB4Q9NTQ9 266 aa8.1□□□□□ -1.11
PTCD2-201ENST00000308077 STX8Q9UNK0 236 aa8.1□□□□□ -1.11
PTCD2-201ENST00000308077 SCAF8Q9UPN6 1271 aaKnown RBP8.1□□□□□ -1.11
PTCD2-201ENST00000308077 CCDC196A0A1B0GTZ2 297 aa8.1□□□□□ -1.11
PTCD2-201ENST00000308077 CALM1P0DP23 149 aa8.1□□□□□ -1.11
PTCD2-201ENST00000308077 CALM2P0DP24 149 aa8.1□□□□□ -1.11
PTCD2-201ENST00000308077 CALM3P0DP25 149 aa8.1□□□□□ -1.11
PTCD2-201ENST00000308077 PDIA4P13667 645 aaKnown RBP8.1□□□□□ -1.11
PTCD2-201ENST00000308077 GUCY1B3Q02153 619 aa8.1□□□□□ -1.11
PTCD2-201ENST00000308077 SSRP1Q08945 709 aaKnown RBP8.1□□□□□ -1.11
PTCD2-201ENST00000308077 RESTQ13127 1097 aa8.1□□□□□ -1.11
PTCD2-201ENST00000308077 RRP1BQ14684 758 aaKnown RBP8.1□□□□□ -1.11
PTCD2-201ENST00000308077 TBC1D10BQ4KMP7 808 aaPredicted RBP8.1□□□□□ -1.11
PTCD2-201ENST00000308077 CPLX2Q6PUV4 134 aaKnown RBP8.1□□□□□ -1.11
PTCD2-201ENST00000308077 TMTC3Q6ZXV5 915 aa8.1□□□□□ -1.11
PTCD2-201ENST00000308077 FOXP4Q8IVH2 680 aaPredicted RBP8.1□□□□□ -1.11
PTCD2-201ENST00000308077 CCDC82Q8N4S0 544 aa8.1□□□□□ -1.11
PTCD2-201ENST00000308077 RBM28Q9NW13 759 aaKnown RBP8.1□□□□□ -1.11
PTCD2-201ENST00000308077 MTMR4Q9NYA4 1195 aa8.1□□□□□ -1.11
PTCD2-201ENST00000308077 KIF3AQ9Y496 699 aa8.1□□□□□ -1.11
PTCD2-201ENST00000308077 CNTNAP5Q8WYK1 1306 aa8.09□□□□□ -1.11
PTCD2-201ENST00000308077 PIEZO1Q92508 2521 aa8.09□□□□□ -1.11
PTCD2-201ENST00000308077 DDX11L8A8MPP1 907 aa8.09□□□□□ -1.11
PTCD2-201ENST00000308077 H3BQV1 296 aa8.09□□□□□ -1.11
PTCD2-201ENST00000308077 MYO1BO43795 1136 aa8.09□□□□□ -1.11
PTCD2-201ENST00000308077 JAG1P78504 1218 aa8.09□□□□□ -1.11
PTCD2-201ENST00000308077 GRM4Q14833 912 aa8.09□□□□□ -1.11
PTCD2-201ENST00000308077 PPP2R5BQ15173 497 aa8.09□□□□□ -1.11
PTCD2-201ENST00000308077 KIF4BQ2VIQ3 1234 aa8.09□□□□□ -1.11
PTCD2-201ENST00000308077 CERKLQ49MI3 558 aaPredicted RBP8.09□□□□□ -1.11
PTCD2-201ENST00000308077 FAM173BQ6P4H8 233 aa8.09□□□□□ -1.11
PTCD2-201ENST00000308077 FAM83AQ86UY5 434 aa8.09□□□□□ -1.11
PTCD2-201ENST00000308077 GPC2Q8N158 579 aa8.09□□□□□ -1.11
PTCD2-201ENST00000308077 STAG2Q8N3U4 1231 aa8.09□□□□□ -1.11
PTCD2-201ENST00000308077 SRBD1Q8N5C6 995 aaKnown RBP8.09□□□□□ -1.11
PTCD2-201ENST00000308077 C8orf76Q96K31 380 aa8.09□□□□□ -1.11
PTCD2-201ENST00000308077 ALG1Q9BT22 464 aa8.09□□□□□ -1.11
PTCD2-201ENST00000308077 RNF181Q9P0P0 153 aa8.09□□□□□ -1.11
PTCD2-201ENST00000308077 MAD2L2Q9UI95 211 aa8.09□□□□□ -1.11
PTCD2-201ENST00000308077 MPHOSPH10O00566 681 aaKnown RBP8.08□□□□□ -1.12
PTCD2-201ENST00000308077 GDF11O95390 407 aa8.08□□□□□ -1.12
PTCD2-201ENST00000308077 TOP1P11387 765 aaKnown RBP8.08□□□□□ -1.12
PTCD2-201ENST00000308077 VEGFAP15692 232 aaPredicted RBP8.08□□□□□ -1.12
PTCD2-201ENST00000308077 PKN1Q16512 942 aa8.08□□□□□ -1.12
PTCD2-201ENST00000308077 SLC35G1Q2M3R5 365 aa8.08□□□□□ -1.12
PTCD2-201ENST00000308077 FBXO18Q8NFZ0 1043 aa8.08□□□□□ -1.12
PTCD2-201ENST00000308077 CTCFLQ8NI51 663 aaPredicted RBP8.08□□□□□ -1.12
PTCD2-201ENST00000308077 TRPM4Q8TD43 1214 aa8.08□□□□□ -1.12
PTCD2-201ENST00000308077 SHISA4Q96DD7 197 aa8.08□□□□□ -1.12
PTCD2-201ENST00000308077 CCDC17Q96LX7 622 aa8.08□□□□□ -1.12
PTCD2-201ENST00000308077 MAP3K14Q99558 947 aa8.08□□□□□ -1.12
PTCD2-201ENST00000308077 TRIM34Q9BYJ4 488 aa8.08□□□□□ -1.12
PTCD2-201ENST00000308077 GPRC5DQ9NZD1 345 aa8.08□□□□□ -1.12
PTCD2-201ENST00000308077 TAOK2Q9UL54 1235 aa8.08□□□□□ -1.12
PTCD2-201ENST00000308077 MTMR7Q9Y216 660 aa8.08□□□□□ -1.12
PTCD2-201ENST00000308077 CNPY2Q9Y2B0 182 aa8.08□□□□□ -1.12
PTCD2-201ENST00000308077 ATAD5Q96QE3 1844 aa8.08□□□□□ -1.12
PTCD2-201ENST00000308077 hCG_1642624A0A1W2PR95 340 aa8.08□□□□□ -1.12
PTCD2-201ENST00000308077 DDNO94850 711 aaPredicted RBP8.08□□□□□ -1.12
PTCD2-201ENST00000308077 EPS15P42566 896 aa8.08□□□□□ -1.12
PTCD2-201ENST00000308077 DNM1Q05193 864 aaKnown RBP8.08□□□□□ -1.12
PTCD2-201ENST00000308077 C9orf131Q5VYM1 1079 aa8.08□□□□□ -1.12
PTCD2-201ENST00000308077 LRRC47Q8N1G4 583 aaKnown RBP8.08□□□□□ -1.12
PTCD2-201ENST00000308077 SYMPKQ92797 1274 aaKnown RBP8.08□□□□□ -1.12
PTCD2-201ENST00000308077 TEPSINQ96N21 525 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms