RNA–Protein interactions for RNA: ENST00000307616.1

C11orf40-201, Transcript of chromosome 11 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C11orf40, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf40-201ENST00000307616 DUSP15Q9H1R2 295 aaPredicted RBP8.68□□□□□ -1.02
C11orf40-201ENST00000307616 CARS2Q9HA77 564 aaKnown RBP8.68□□□□□ -1.02
C11orf40-201ENST00000307616 MBNL3Q9NUK0 354 aaKnown RBP8.68□□□□□ -1.02
C11orf40-201ENST00000307616 EFR3BQ9Y2G0 817 aa8.68□□□□□ -1.02
C11orf40-201ENST00000307616 IMPDH2P12268 514 aa8.67□□□□□ -1.02
C11orf40-201ENST00000307616 TAL1P17542 331 aaPredicted RBP8.67□□□□□ -1.02
C11orf40-201ENST00000307616 MCTP1Q6DN14 999 aa8.67□□□□□ -1.02
C11orf40-201ENST00000307616 CCDC81Q6ZN84 652 aa8.67□□□□□ -1.02
C11orf40-201ENST00000307616 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.67□□□□□ -1.02
C11orf40-201ENST00000307616 CCSER2Q9H7U1 834 aa8.67□□□□□ -1.02
C11orf40-201ENST00000307616 FAM86C2PA6NEL3 165 aa8.66□□□□□ -1.02
C11orf40-201ENST00000307616 TNFRSF10CO14798 259 aa8.66□□□□□ -1.02
C11orf40-201ENST00000307616 TCF3P15923 654 aa8.66□□□□□ -1.02
C11orf40-201ENST00000307616 TPP2P29144 1249 aaPredicted RBP8.66□□□□□ -1.02
C11orf40-201ENST00000307616 SLC23A3Q6PIS1 610 aa8.66□□□□□ -1.02
C11orf40-201ENST00000307616 RASGRP4Q8TDF6 673 aa8.66□□□□□ -1.02
C11orf40-201ENST00000307616 ZNF512BQ96KM6 892 aaPredicted RBP8.66□□□□□ -1.02
C11orf40-201ENST00000307616 SLC9A7Q96T83 725 aa8.66□□□□□ -1.02
C11orf40-201ENST00000307616 GPR62Q9BZJ7 368 aa8.66□□□□□ -1.02
C11orf40-201ENST00000307616 TRIT1Q9H3H1 467 aaKnown RBP8.66□□□□□ -1.02
C11orf40-201ENST00000307616 RC3H2Q9HBD1 1191 aaKnown RBP8.66□□□□□ -1.02
C11orf40-201ENST00000307616 SRFP11831 508 aa8.65□□□□□ -1.02
C11orf40-201ENST00000307616 ERCC5P28715 1186 aaPredicted RBP8.65□□□□□ -1.02
C11orf40-201ENST00000307616 CCNFP41002 786 aa8.65□□□□□ -1.02
C11orf40-201ENST00000307616 GJA8P48165 433 aa8.65□□□□□ -1.02
C11orf40-201ENST00000307616 COL9A2Q14055 689 aaPredicted RBP8.65□□□□□ -1.02
C11orf40-201ENST00000307616 TMEM192Q8IY95 271 aa8.65□□□□□ -1.02
C11orf40-201ENST00000307616 SPATA32Q96LK8 384 aa8.65□□□□□ -1.02
C11orf40-201ENST00000307616 GPATCH2Q9NW75 528 aa8.65□□□□□ -1.02
C11orf40-201ENST00000307616 LMCD1Q9NZU5 365 aa8.65□□□□□ -1.02
C11orf40-201ENST00000307616 INPP5FQ9Y2H2 1132 aa8.65□□□□□ -1.02
C11orf40-201ENST00000307616 CLEC3AO75596 197 aa8.64□□□□□ -1.03
C11orf40-201ENST00000307616 ACRP10323 421 aa8.64□□□□□ -1.03
C11orf40-201ENST00000307616 SOX9P48436 509 aa8.64□□□□□ -1.03
C11orf40-201ENST00000307616 RNF4P78317 190 aa8.64□□□□□ -1.03
C11orf40-201ENST00000307616 NBPF12Q5TAG4 269 aaPredicted RBP8.64□□□□□ -1.03
C11orf40-201ENST00000307616 LRRN4CLQ8ND94 238 aa8.64□□□□□ -1.03
C11orf40-201ENST00000307616 SLC6A18Q96N87 628 aa8.64□□□□□ -1.03
C11orf40-201ENST00000307616 SHISA3A0PJX4 238 aa8.63□□□□□ -1.03
C11orf40-201ENST00000307616 ESR1P03372 595 aa8.63□□□□□ -1.03
C11orf40-201ENST00000307616 RUFY4Q6ZNE9 571 aa8.63□□□□□ -1.03
C11orf40-201ENST00000307616 TMPRSS7Q7RTY8 843 aa8.63□□□□□ -1.03
C11orf40-201ENST00000307616 CREG2Q8IUH2 290 aa8.63□□□□□ -1.03
C11orf40-201ENST00000307616 RBBP8NLQ8NC74 664 aaPredicted RBP8.63□□□□□ -1.03
C11orf40-201ENST00000307616 NASPP49321 788 aaPredicted RBP8.62□□□□□ -1.03
C11orf40-201ENST00000307616 INTS3Q68E01 1043 aaKnown RBP8.62□□□□□ -1.03
C11orf40-201ENST00000307616 TSPYL5Q86VY4 417 aaPredicted RBP8.62□□□□□ -1.03
C11orf40-201ENST00000307616 LSRQ86X29 649 aaPredicted RBP8.62□□□□□ -1.03
C11orf40-201ENST00000307616 TM9SF2Q99805 663 aa8.62□□□□□ -1.03
C11orf40-201ENST00000307616 DUSP13Q9UII6 198 aa8.62□□□□□ -1.03
C11orf40-201ENST00000307616 CLEC16AQ2KHT3 1053 aa8.61□□□□□ -1.03
C11orf40-201ENST00000307616 GAB4Q2WGN9 574 aa8.61□□□□□ -1.03
C11orf40-201ENST00000307616 NBPF9Q3BBW0 867 aa8.61□□□□□ -1.03
C11orf40-201ENST00000307616 CRBNQ96SW2 442 aa8.61□□□□□ -1.03
C11orf40-201ENST00000307616 MKRN2Q9H000 416 aaKnown RBP8.61□□□□□ -1.03
C11orf40-201ENST00000307616 GUCY2CP25092 1073 aa8.6□□□□□ -1.03
C11orf40-201ENST00000307616 EIF6P56537 245 aaKnown RBP8.6□□□□□ -1.03
C11orf40-201ENST00000307616 NMIQ13287 307 aaPredicted RBP8.6□□□□□ -1.03
C11orf40-201ENST00000307616 SNW1Q13573 536 aaKnown RBP8.6□□□□□ -1.03
C11orf40-201ENST00000307616 ZYXQ15942 572 aaKnown RBP8.6□□□□□ -1.03
C11orf40-201ENST00000307616 TMC3Q7Z5M5 1100 aa8.6□□□□□ -1.03
C11orf40-201ENST00000307616 TAB3Q8N5C8 712 aaPredicted RBP8.6□□□□□ -1.03
C11orf40-201ENST00000307616 SRRTQ9BXP5 876 aaKnown RBP8.6□□□□□ -1.03
C11orf40-201ENST00000307616 ASCC2Q9H1I8 757 aaPredicted RBP8.6□□□□□ -1.03
C11orf40-201ENST00000307616 LTKP29376 864 aa8.59□□□□□ -1.03
C11orf40-201ENST00000307616 SLAMF8Q9P0V8 285 aa8.59□□□□□ -1.03
C11orf40-201ENST00000307616 SUCOQ9UBS9 1254 aaKnown RBP8.59□□□□□ -1.03
C11orf40-201ENST00000307616 E9PSI1 815 aa8.58□□□□□ -1.04
C11orf40-201ENST00000307616 PAPLNO95428 1278 aa8.58□□□□□ -1.04
C11orf40-201ENST00000307616 ITGB5P18084 799 aa8.58□□□□□ -1.04
C11orf40-201ENST00000307616 EGR3Q06889 387 aa8.58□□□□□ -1.04
C11orf40-201ENST00000307616 TDRD10Q5VZ19 366 aaKnown RBP8.58□□□□□ -1.04
C11orf40-201ENST00000307616 UNC5AQ6ZN44 842 aa8.58□□□□□ -1.04
C11orf40-201ENST00000307616 ATG4DQ86TL0 474 aaPredicted RBP8.58□□□□□ -1.04
C11orf40-201ENST00000307616 CPLX3Q8WVH0 158 aa8.58□□□□□ -1.04
C11orf40-201ENST00000307616 SEC16BQ96JE7 1060 aa8.58□□□□□ -1.04
C11orf40-201ENST00000307616 DHRS1Q96LJ7 313 aa8.58□□□□□ -1.04
C11orf40-201ENST00000307616 ALPK1Q96QP1 1244 aa8.58□□□□□ -1.04
C11orf40-201ENST00000307616 HDAC8Q9BY41 377 aa8.58□□□□□ -1.04
C11orf40-201ENST00000307616 PRDM14Q9GZV8 571 aa8.58□□□□□ -1.04
C11orf40-201ENST00000307616 CAPN10Q9HC96 672 aa8.58□□□□□ -1.04
C11orf40-201ENST00000307616 CTNND2Q9UQB3 1225 aa8.58□□□□□ -1.04
C11orf40-201ENST00000307616 PCDHA11Q9Y5I1 949 aa8.58□□□□□ -1.04
C11orf40-201ENST00000307616 DNAJC25-GNG10A0A024R161 153 aa8.57□□□□□ -1.04
C11orf40-201ENST00000307616 C9IYK1 514 aa8.57□□□□□ -1.04
C11orf40-201ENST00000307616 GIPRP48546 466 aa8.57□□□□□ -1.04
C11orf40-201ENST00000307616 RALGPS1Q5JS13 557 aa8.57□□□□□ -1.04
C11orf40-201ENST00000307616 BIN1O00499 593 aa8.56□□□□□ -1.04
C11orf40-201ENST00000307616 ATF4P18848 351 aaPredicted RBP8.56□□□□□ -1.04
C11orf40-201ENST00000307616 PMS1P54277 932 aaKnown RBP8.56□□□□□ -1.04
C11orf40-201ENST00000307616 CCDC144CPQ8IYA2 1237 aa8.56□□□□□ -1.04
C11orf40-201ENST00000307616 ENOX1Q8TC92 643 aaKnown RBP8.56□□□□□ -1.04
C11orf40-201ENST00000307616 SYTL5Q8TDW5 730 aaPredicted RBP8.56□□□□□ -1.04
C11orf40-201ENST00000307616 SHDQ96IW2 340 aa8.56□□□□□ -1.04
C11orf40-201ENST00000307616 C19orf73Q9NVV2 129 aa8.56□□□□□ -1.04
C11orf40-201ENST00000307616 FBXL21Q9UKT6 434 aa8.56□□□□□ -1.04
C11orf40-201ENST00000307616 MINPP1Q9UNW1 487 aa8.56□□□□□ -1.04
C11orf40-201ENST00000307616 PRAMEF1O95521 474 aa8.55□□□□□ -1.04
C11orf40-201ENST00000307616 JUNBP17275 347 aaPredicted RBP8.55□□□□□ -1.04
C11orf40-201ENST00000307616 AUHQ13825 339 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms