RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 AK2P54819 239 aa9.2□□□□□ -0.94
TM4SF1-201ENST00000305366 JAG1P78504 1218 aa9.2□□□□□ -0.94
TM4SF1-201ENST00000305366 VPS53Q5VIR6 699 aa9.2□□□□□ -0.94
TM4SF1-201ENST00000305366 RUFY3Q7L099 469 aa9.2□□□□□ -0.94
TM4SF1-201ENST00000305366 ADGRA1Q86SQ6 560 aa9.2□□□□□ -0.94
TM4SF1-201ENST00000305366 ZSCAN31Q96LW9 406 aaPredicted RBP9.2□□□□□ -0.94
TM4SF1-201ENST00000305366 RBSNQ9H1K0 784 aa9.2□□□□□ -0.94
TM4SF1-201ENST00000305366 SH2B1Q9NRF2 756 aaPredicted RBP9.2□□□□□ -0.94
TM4SF1-201ENST00000305366 TLR7Q9NYK1 1049 aaKnown RBP9.2□□□□□ -0.94
TM4SF1-201ENST00000305366 PI4KBQ9UBF8 816 aa9.2□□□□□ -0.94
TM4SF1-201ENST00000305366 PNMA3Q9UL41 463 aa9.2□□□□□ -0.94
TM4SF1-201ENST00000305366 KIAA0100Q14667 2235 aaKnown RBP9.2□□□□□ -0.94
TM4SF1-201ENST00000305366 IDH1O75874 414 aaKnown RBP9.19□□□□□ -0.94
TM4SF1-201ENST00000305366 SGPL1O95470 568 aa9.19□□□□□ -0.94
TM4SF1-201ENST00000305366 MTMR2Q13614 643 aa9.19□□□□□ -0.94
TM4SF1-201ENST00000305366 NECTIN1Q15223 517 aa9.19□□□□□ -0.94
TM4SF1-201ENST00000305366 AACSQ86V21 672 aa9.19□□□□□ -0.94
TM4SF1-201ENST00000305366 MIGA1Q8NAN2 632 aa9.19□□□□□ -0.94
TM4SF1-201ENST00000305366 NAP1L5Q96NT1 182 aaPredicted RBP9.19□□□□□ -0.94
TM4SF1-201ENST00000305366 P2RX7Q99572 595 aaKnown RBP9.19□□□□□ -0.94
TM4SF1-201ENST00000305366 HTATIP2Q9BUP3 242 aa9.19□□□□□ -0.94
TM4SF1-201ENST00000305366 ASCC2Q9H1I8 757 aaPredicted RBP9.19□□□□□ -0.94
TM4SF1-201ENST00000305366 ZSWIM6Q9HCJ5 1215 aa9.19□□□□□ -0.94
TM4SF1-201ENST00000305366 TMOD4Q9NZQ9 345 aa9.19□□□□□ -0.94
TM4SF1-201ENST00000305366 RBM27Q9P2N5 1060 aaKnown RBP9.19□□□□□ -0.94
TM4SF1-201ENST00000305366 SLC45A1Q9Y2W3 748 aa9.19□□□□□ -0.94
TM4SF1-201ENST00000305366 ECM29Q5VYK3 1845 aa9.19□□□□□ -0.94
TM4SF1-201ENST00000305366 CCDC171Q6TFL3 1326 aa9.19□□□□□ -0.94
TM4SF1-201ENST00000305366 RFX7Q2KHR2 1363 aa9.19□□□□□ -0.94
TM4SF1-201ENST00000305366 BRCA2P51587 3418 aa9.19□□□□□ -0.94
TM4SF1-201ENST00000305366 IRX3P78415 501 aaPredicted RBP9.19□□□□□ -0.94
TM4SF1-201ENST00000305366 PTH1RQ03431 593 aa9.19□□□□□ -0.94
TM4SF1-201ENST00000305366 TRIM32Q13049 653 aa9.19□□□□□ -0.94
TM4SF1-201ENST00000305366 ZYXQ15942 572 aaKnown RBP9.19□□□□□ -0.94
TM4SF1-201ENST00000305366 NOL8Q76FK4 1167 aaKnown RBP9.19□□□□□ -0.94
TM4SF1-201ENST00000305366 ZSCAN30Q86W11 494 aa9.19□□□□□ -0.94
TM4SF1-201ENST00000305366 PROCA1Q8NCQ7 364 aaPredicted RBP9.19□□□□□ -0.94
TM4SF1-201ENST00000305366 EAF2Q96CJ1 260 aaPredicted RBP9.19□□□□□ -0.94
TM4SF1-201ENST00000305366 AS3MTQ9HBK9 375 aa9.19□□□□□ -0.94
TM4SF1-201ENST00000305366 ARAP2Q8WZ64 1704 aa9.19□□□□□ -0.94
TM4SF1-201ENST00000305366 EVI5O60447 810 aa9.18□□□□□ -0.94
TM4SF1-201ENST00000305366 ZSCAN22P10073 491 aaPredicted RBP9.18□□□□□ -0.94
TM4SF1-201ENST00000305366 CASTP20810 708 aaKnown RBP9.18□□□□□ -0.94
TM4SF1-201ENST00000305366 CYP2B6P20813 491 aa9.18□□□□□ -0.94
TM4SF1-201ENST00000305366 USP5P45974 858 aa9.18□□□□□ -0.94
TM4SF1-201ENST00000305366 PABPC4Q13310 644 aaKnown RBP eCLIP9.18□□□□□ -0.94
TM4SF1-201ENST00000305366 CCAR1Q8IX12 1150 aaKnown RBP9.18□□□□□ -0.94
TM4SF1-201ENST00000305366 MAP4K1Q92918 833 aa9.18□□□□□ -0.94
TM4SF1-201ENST00000305366 CHAMP1Q96JM3 812 aa9.18□□□□□ -0.94
TM4SF1-201ENST00000305366 ALDH8A1Q9H2A2 487 aaPredicted RBP9.18□□□□□ -0.94
TM4SF1-201ENST00000305366 HERC5Q9UII4 1024 aaKnown RBP9.18□□□□□ -0.94
TM4SF1-201ENST00000305366 ATP6V1DQ9Y5K8 247 aa9.18□□□□□ -0.94
TM4SF1-201ENST00000305366 NR2E3Q9Y5X4 410 aa9.18□□□□□ -0.94
TM4SF1-201ENST00000305366 CYP46A1Q9Y6A2 500 aa9.18□□□□□ -0.94
TM4SF1-201ENST00000305366 ZSWIM8A7E2V4 1837 aa9.17□□□□□ -0.94
TM4SF1-201ENST00000305366 SYCE3A1L190 88 aa9.17□□□□□ -0.94
TM4SF1-201ENST00000305366 STX6O43752 255 aa9.17□□□□□ -0.94
TM4SF1-201ENST00000305366 PLCG2P16885 1265 aa9.17□□□□□ -0.94
TM4SF1-201ENST00000305366 ZKSCAN1P17029 563 aaPredicted RBP9.17□□□□□ -0.94
TM4SF1-201ENST00000305366 GCLCP48506 637 aaPredicted RBP9.17□□□□□ -0.94
TM4SF1-201ENST00000305366 BACE1P56817 501 aa9.17□□□□□ -0.94
TM4SF1-201ENST00000305366 FAM110CQ1W6H9 321 aa9.17□□□□□ -0.94
TM4SF1-201ENST00000305366 FOXD4L5Q5VV16 416 aaPredicted RBP9.17□□□□□ -0.94
TM4SF1-201ENST00000305366 FOXP4Q8IVH2 680 aaPredicted RBP9.17□□□□□ -0.94
TM4SF1-201ENST00000305366 MAGEB6Q8N7X4 407 aa9.17□□□□□ -0.94
TM4SF1-201ENST00000305366 PXYLP1Q8TE99 480 aa9.17□□□□□ -0.94
TM4SF1-201ENST00000305366 DIS3LQ8TF46 1054 aaKnown RBP9.17□□□□□ -0.94
TM4SF1-201ENST00000305366 FOXD4L4Q8WXT5 416 aaPredicted RBP9.17□□□□□ -0.94
TM4SF1-201ENST00000305366 PAWRQ96IZ0 340 aaKnown RBP9.17□□□□□ -0.94
TM4SF1-201ENST00000305366 PAGR1Q9BTK6 254 aa9.17□□□□□ -0.94
TM4SF1-201ENST00000305366 DHX36Q9H2U1 1008 aaKnown RBP9.17□□□□□ -0.94
TM4SF1-201ENST00000305366 PDRG1Q9NUG6 133 aa9.17□□□□□ -0.94
TM4SF1-201ENST00000305366 DBNLQ9UJU6 430 aaKnown RBP9.17□□□□□ -0.94
TM4SF1-201ENST00000305366 SMC3Q9UQE7 1217 aa9.17□□□□□ -0.94
TM4SF1-201ENST00000305366 MTMR7Q9Y216 660 aa9.17□□□□□ -0.94
TM4SF1-201ENST00000305366 FLT1P17948 1338 aa9.17□□□□□ -0.94
TM4SF1-201ENST00000305366 USP17L10C9JJH3 530 aa9.17□□□□□ -0.94
TM4SF1-201ENST00000305366 GABBR2O75899 941 aa9.17□□□□□ -0.94
TM4SF1-201ENST00000305366 F13A1P00488 732 aa9.17□□□□□ -0.94
TM4SF1-201ENST00000305366 HLA-DOAP06340 250 aa9.17□□□□□ -0.94
TM4SF1-201ENST00000305366 SYT1P21579 422 aa9.17□□□□□ -0.94
TM4SF1-201ENST00000305366 PSMA5P28066 241 aa9.17□□□□□ -0.94
TM4SF1-201ENST00000305366 PPP4CP60510 307 aa9.17□□□□□ -0.94
TM4SF1-201ENST00000305366 IRF5Q13568 498 aa9.17□□□□□ -0.94
TM4SF1-201ENST00000305366 TSGA10IPQ3SY00 556 aa9.17□□□□□ -0.94
TM4SF1-201ENST00000305366 CREB3L3Q68CJ9 461 aa9.17□□□□□ -0.94
TM4SF1-201ENST00000305366 JAKMIP1Q96N16 626 aaKnown RBP9.17□□□□□ -0.94
TM4SF1-201ENST00000305366 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.17□□□□□ -0.94
TM4SF1-201ENST00000305366 DNAJC18Q9H819 358 aa9.17□□□□□ -0.94
TM4SF1-201ENST00000305366 TXNRD2Q9NNW7 524 aa9.17□□□□□ -0.94
TM4SF1-201ENST00000305366 GPR108Q9NPR9 543 aa9.17□□□□□ -0.94
TM4SF1-201ENST00000305366 RBM8AQ9Y5S9 174 aaKnown RBP9.17□□□□□ -0.94
TM4SF1-201ENST00000305366 LETM1O95202 739 aaPredicted RBP9.16□□□□□ -0.94
TM4SF1-201ENST00000305366 GH2P01242 217 aa9.16□□□□□ -0.94
TM4SF1-201ENST00000305366 ASNSP08243 561 aa9.16□□□□□ -0.94
TM4SF1-201ENST00000305366 UBE2HP62256 183 aa9.16□□□□□ -0.94
TM4SF1-201ENST00000305366 NMIQ13287 307 aaPredicted RBP9.16□□□□□ -0.94
TM4SF1-201ENST00000305366 CSPP1Q1MSJ5 1256 aa9.16□□□□□ -0.94
TM4SF1-201ENST00000305366 Q3C1V9 767 aa9.16□□□□□ -0.94
TM4SF1-201ENST00000305366 ADCK5Q3MIX3 580 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms