RNA–Protein interactions for RNA: ENST00000304621.10

TTC39C-201, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TTC39C, Length 2,304 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-201ENST00000304621 KAT14Q9H8E8 782 aa6.72□□□□□ -1.33
TTC39C-201ENST00000304621 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.72□□□□□ -1.33
TTC39C-201ENST00000304621 PI4KBQ9UBF8 816 aa6.72□□□□□ -1.33
TTC39C-201ENST00000304621 STX8Q9UNK0 236 aa6.72□□□□□ -1.33
TTC39C-201ENST00000304621 STK36Q9NRP7 1315 aa6.72□□□□□ -1.33
TTC39C-201ENST00000304621 MYH15Q9Y2K3 1946 aa6.72□□□□□ -1.33
TTC39C-201ENST00000304621 H3BQV1 296 aa6.72□□□□□ -1.33
TTC39C-201ENST00000304621 MPHOSPH10O00566 681 aaKnown RBP6.72□□□□□ -1.33
TTC39C-201ENST00000304621 ADAMTS3O15072 1205 aa6.72□□□□□ -1.33
TTC39C-201ENST00000304621 GADD45BO75293 160 aaPredicted RBP6.72□□□□□ -1.33
TTC39C-201ENST00000304621 PRPF40AO75400 957 aaKnown RBP6.72□□□□□ -1.33
TTC39C-201ENST00000304621 GOLGA8HP0CJ92 632 aa6.72□□□□□ -1.33
TTC39C-201ENST00000304621 CD44P16070 742 aaKnown RBP6.72□□□□□ -1.33
TTC39C-201ENST00000304621 EPS15P42566 896 aa6.72□□□□□ -1.33
TTC39C-201ENST00000304621 IFFO2Q5TF58 517 aa6.72□□□□□ -1.33
TTC39C-201ENST00000304621 LRRC47Q8N1G4 583 aaKnown RBP6.72□□□□□ -1.33
TTC39C-201ENST00000304621 FBXO18Q8NFZ0 1043 aa6.72□□□□□ -1.33
TTC39C-201ENST00000304621 PIBF1Q8WXW3 757 aa6.72□□□□□ -1.33
TTC39C-201ENST00000304621 C8orf76Q96K31 380 aa6.72□□□□□ -1.33
TTC39C-201ENST00000304621 TEPSINQ96N21 525 aa6.72□□□□□ -1.33
TTC39C-201ENST00000304621 ZNF287Q9HBT7 754 aa6.72□□□□□ -1.33
TTC39C-201ENST00000304621 TMOD2Q9NZR1 351 aa6.72□□□□□ -1.33
TTC39C-201ENST00000304621 RNF181Q9P0P0 153 aa6.72□□□□□ -1.33
TTC39C-201ENST00000304621 DDX11L8A8MPP1 907 aa6.71□□□□□ -1.33
TTC39C-201ENST00000304621 USP17L5A8MUK1 530 aa6.71□□□□□ -1.33
TTC39C-201ENST00000304621 CYTH3O43739 400 aa6.71□□□□□ -1.33
TTC39C-201ENST00000304621 CDKL5O76039 1030 aa6.71□□□□□ -1.33
TTC39C-201ENST00000304621 DDNO94850 711 aaPredicted RBP6.71□□□□□ -1.33
TTC39C-201ENST00000304621 TOP1P11387 765 aaKnown RBP6.71□□□□□ -1.33
TTC39C-201ENST00000304621 NUBP1P53384 320 aa6.71□□□□□ -1.33
TTC39C-201ENST00000304621 HIRAP54198 1017 aaPredicted RBP6.71□□□□□ -1.33
TTC39C-201ENST00000304621 SEPT2Q15019 361 aa6.71□□□□□ -1.33
TTC39C-201ENST00000304621 KIF4BQ2VIQ3 1234 aa6.71□□□□□ -1.33
TTC39C-201ENST00000304621 CERKLQ49MI3 558 aaPredicted RBP6.71□□□□□ -1.33
TTC39C-201ENST00000304621 KRT40Q6A162 431 aa6.71□□□□□ -1.33
TTC39C-201ENST00000304621 USP17L2Q6R6M4 530 aa6.71□□□□□ -1.33
TTC39C-201ENST00000304621 MIGA2Q7L4E1 593 aa6.71□□□□□ -1.33
TTC39C-201ENST00000304621 USP48Q86UV5 1035 aa6.71□□□□□ -1.33
TTC39C-201ENST00000304621 FOXP4Q8IVH2 680 aaPredicted RBP6.71□□□□□ -1.33
TTC39C-201ENST00000304621 GPT2Q8TD30 523 aa6.71□□□□□ -1.33
TTC39C-201ENST00000304621 SPOCK2Q92563 424 aa6.71□□□□□ -1.33
TTC39C-201ENST00000304621 TFIP11Q9UBB9 837 aaKnown RBP6.71□□□□□ -1.33
TTC39C-201ENST00000304621 CLIP2Q9UDT6 1046 aa6.71□□□□□ -1.33
TTC39C-201ENST00000304621 KCNJ14Q9UNX9 436 aa6.71□□□□□ -1.33
TTC39C-201ENST00000304621 TCHHQ07283 1943 aa6.71□□□□□ -1.34
TTC39C-201ENST00000304621 FRMPD2Q68DX3 1309 aaPredicted RBP6.71□□□□□ -1.34
TTC39C-201ENST00000304621 PALM3A6NDB9 673 aaPredicted RBP6.71□□□□□ -1.34
TTC39C-201ENST00000304621 PRPF3O43395 683 aaKnown RBP6.71□□□□□ -1.34
TTC39C-201ENST00000304621 TRAK2O60296 914 aa6.71□□□□□ -1.34
TTC39C-201ENST00000304621 CALM1P0DP23 149 aa6.71□□□□□ -1.34
TTC39C-201ENST00000304621 CALM2P0DP24 149 aa6.71□□□□□ -1.34
TTC39C-201ENST00000304621 CALM3P0DP25 149 aa6.71□□□□□ -1.34
TTC39C-201ENST00000304621 NT5C2P49902 561 aa6.71□□□□□ -1.34
TTC39C-201ENST00000304621 RASA3Q14644 834 aa6.71□□□□□ -1.34
TTC39C-201ENST00000304621 FKBP1CQ5VVH2 108 aa6.71□□□□□ -1.34
TTC39C-201ENST00000304621 C9orf131Q5VYM1 1079 aa6.71□□□□□ -1.34
TTC39C-201ENST00000304621 DLK2Q6UY11 383 aa6.71□□□□□ -1.34
TTC39C-201ENST00000304621 FAM83AQ86UY5 434 aa6.71□□□□□ -1.34
TTC39C-201ENST00000304621 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.71□□□□□ -1.34
TTC39C-201ENST00000304621 RBM28Q9NW13 759 aaKnown RBP6.71□□□□□ -1.34
TTC39C-201ENST00000304621 GPRC5DQ9NZD1 345 aa6.71□□□□□ -1.34
TTC39C-201ENST00000304621 HACL1Q9UJ83 578 aa6.71□□□□□ -1.34
TTC39C-201ENST00000304621 V9GY48 417 aaPredicted RBP6.71□□□□□ -1.34
TTC39C-201ENST00000304621 MYH4Q9Y623 1939 aa6.7□□□□□ -1.34
TTC39C-201ENST00000304621 CCDC196A0A1B0GTZ2 297 aa6.7□□□□□ -1.34
TTC39C-201ENST00000304621 FIBPO43427 364 aa6.7□□□□□ -1.34
TTC39C-201ENST00000304621 GH2P01242 217 aa6.7□□□□□ -1.34
TTC39C-201ENST00000304621 PDHBP11177 359 aa6.7□□□□□ -1.34
TTC39C-201ENST00000304621 EEF2P13639 858 aaKnown RBP6.7□□□□□ -1.34
TTC39C-201ENST00000304621 KIF23Q02241 960 aaPredicted RBP6.7□□□□□ -1.34
TTC39C-201ENST00000304621 CCDC178Q5BJE1 867 aa6.7□□□□□ -1.34
TTC39C-201ENST00000304621 PRAMEF18Q5VWM3 479 aa6.7□□□□□ -1.34
TTC39C-201ENST00000304621 CPLX2Q6PUV4 134 aaKnown RBP6.7□□□□□ -1.34
TTC39C-201ENST00000304621 CCDC84Q86UT8 332 aaPredicted RBP6.7□□□□□ -1.34
TTC39C-201ENST00000304621 GPC2Q8N158 579 aa6.7□□□□□ -1.34
TTC39C-201ENST00000304621 TMEM87AQ8NBN3 555 aa6.7□□□□□ -1.34
TTC39C-201ENST00000304621 CTCFLQ8NI51 663 aaPredicted RBP6.7□□□□□ -1.34
TTC39C-201ENST00000304621 OXER1Q8TDS5 423 aa6.7□□□□□ -1.34
TTC39C-201ENST00000304621 CCDC17Q96LX7 622 aa6.7□□□□□ -1.34
TTC39C-201ENST00000304621 RNF26Q9BY78 433 aaPredicted RBP6.7□□□□□ -1.34
TTC39C-201ENST00000304621 VPS54Q9P1Q0 977 aa6.7□□□□□ -1.34
TTC39C-201ENST00000304621 MYH6P13533 1939 aa6.7□□□□□ -1.34
TTC39C-201ENST00000304621 A0A1W2PRG0 241 aa6.7□□□□□ -1.34
TTC39C-201ENST00000304621 MYO1BO43795 1136 aa6.7□□□□□ -1.34
TTC39C-201ENST00000304621 DEXIO95424 95 aa6.7□□□□□ -1.34
TTC39C-201ENST00000304621 TTLL1O95922 423 aa6.7□□□□□ -1.34
TTC39C-201ENST00000304621 SNHG28P0DPA3 235 aa6.7□□□□□ -1.34
TTC39C-201ENST00000304621 NCLP19338 710 aaKnown RBP6.7□□□□□ -1.34
TTC39C-201ENST00000304621 ATP2B2Q01814 1243 aa6.7□□□□□ -1.34
TTC39C-201ENST00000304621 NPY5RQ15761 445 aa6.7□□□□□ -1.34
TTC39C-201ENST00000304621 ABCB5Q2M3G0 1257 aa6.7□□□□□ -1.34
TTC39C-201ENST00000304621 NOM1Q5C9Z4 860 aaKnown RBP6.7□□□□□ -1.34
TTC39C-201ENST00000304621 KIAA1755Q5JYT7 1200 aa6.7□□□□□ -1.34
TTC39C-201ENST00000304621 ANGEL2Q5VTE6 544 aaKnown RBP6.7□□□□□ -1.34
TTC39C-201ENST00000304621 TTBK2Q6IQ55 1244 aa6.7□□□□□ -1.34
TTC39C-201ENST00000304621 TYW1BQ6NUM6 668 aa6.7□□□□□ -1.34
TTC39C-201ENST00000304621 MAP3K14Q99558 947 aa6.7□□□□□ -1.34
TTC39C-201ENST00000304621 FZD1Q9UP38 647 aa6.7□□□□□ -1.34
TTC39C-201ENST00000304621 KIF3AQ9Y496 699 aa6.7□□□□□ -1.34
TTC39C-201ENST00000304621 FAM205CA6NFA0 338 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms