RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 GCKP35557 465 aa8.42□□□□□ -1.06
SF3B3-201ENST00000302516 MAGEA1P43355 309 aa8.42□□□□□ -1.06
SF3B3-201ENST00000302516 GNGT1P63211 74 aa8.42□□□□□ -1.06
SF3B3-201ENST00000302516 NONOQ15233 471 aaKnown RBP eCLIP8.42□□□□□ -1.06
SF3B3-201ENST00000302516 RASEFQ8IZ41 740 aa8.42□□□□□ -1.06
SF3B3-201ENST00000302516 ASXL2Q76L83 1435 aa8.42□□□□□ -1.06
SF3B3-201ENST00000302516 ADCY9O60503 1353 aa8.42□□□□□ -1.06
SF3B3-201ENST00000302516 XRCC5P13010 732 aaKnown RBP8.42□□□□□ -1.06
SF3B3-201ENST00000302516 AP1ARQ63HQ0 302 aa8.42□□□□□ -1.06
SF3B3-201ENST00000302516 CACYBPQ9HB71 228 aaKnown RBP8.42□□□□□ -1.06
SF3B3-201ENST00000302516 RIPOR2Q9Y4F9 1068 aa8.42□□□□□ -1.06
SF3B3-201ENST00000302516 A0A1W2PQ27 194 aa8.42□□□□□ -1.06
SF3B3-201ENST00000302516 A0A1W2PQ64 194 aa8.42□□□□□ -1.06
SF3B3-201ENST00000302516 A0A1W2PQD8 194 aa8.42□□□□□ -1.06
SF3B3-201ENST00000302516 IL2RBP14784 551 aa8.42□□□□□ -1.06
SF3B3-201ENST00000302516 TRIM42Q8IWZ5 723 aa8.42□□□□□ -1.06
SF3B3-201ENST00000302516 RETREG2Q8NC44 543 aa8.42□□□□□ -1.06
SF3B3-201ENST00000302516 TSPYL2Q9H2G4 693 aaPredicted RBP8.42□□□□□ -1.06
SF3B3-201ENST00000302516 TXLNGQ9NUQ3 528 aa8.42□□□□□ -1.06
SF3B3-201ENST00000302516 PA2G4Q9UQ80 394 aaKnown RBP8.42□□□□□ -1.06
SF3B3-201ENST00000302516 SUN1O94901 812 aa8.42□□□□□ -1.06
SF3B3-201ENST00000302516 SEC24BO95487 1268 aa8.42□□□□□ -1.06
SF3B3-201ENST00000302516 ZC3H15Q8WU90 426 aaKnown RBP8.42□□□□□ -1.06
SF3B3-201ENST00000302516 MRPL44Q9H9J2 332 aaKnown RBP8.42□□□□□ -1.06
SF3B3-201ENST00000302516 DDX21Q9NR30 783 aaKnown RBP eCLIP8.42□□□□□ -1.06
SF3B3-201ENST00000302516 GPAA1O43292 621 aa8.42□□□□□ -1.06
SF3B3-201ENST00000302516 C10orf76Q5T2E6 689 aa8.42□□□□□ -1.06
SF3B3-201ENST00000302516 CHST3Q7LGC8 479 aa8.42□□□□□ -1.06
SF3B3-201ENST00000302516 REXO1Q8N1G1 1221 aaKnown RBP8.42□□□□□ -1.06
SF3B3-201ENST00000302516 VTI1AQ96AJ9 217 aa8.42□□□□□ -1.06
SF3B3-201ENST00000302516 PNMA2Q9UL42 364 aa8.42□□□□□ -1.06
SF3B3-201ENST00000302516 H7C1D1 291 aa8.42□□□□□ -1.06
SF3B3-201ENST00000302516 MYL1P05976 194 aa8.42□□□□□ -1.06
SF3B3-201ENST00000302516 KRT3P12035 628 aa8.42□□□□□ -1.06
SF3B3-201ENST00000302516 DCUN1D2Q6PH85 259 aa8.42□□□□□ -1.06
SF3B3-201ENST00000302516 FOXO3O43524 673 aa8.42□□□□□ -1.06
SF3B3-201ENST00000302516 MTHFSDQ2M296 383 aaKnown RBP8.42□□□□□ -1.06
SF3B3-201ENST00000302516 TPTE2Q6XPS3 522 aa8.42□□□□□ -1.06
SF3B3-201ENST00000302516 SPATS2LQ9NUQ6 558 aaKnown RBP8.42□□□□□ -1.06
SF3B3-201ENST00000302516 KRIT1O00522 736 aa8.41□□□□□ -1.06
SF3B3-201ENST00000302516 NOSTRINQ8IVI9 506 aa8.41□□□□□ -1.06
SF3B3-201ENST00000302516 TUBB6Q9BUF5 446 aa8.41□□□□□ -1.06
SF3B3-201ENST00000302516 DMRT2Q9Y5R5 561 aa8.41□□□□□ -1.06
SF3B3-201ENST00000302516 ADCY10Q96PN6 1610 aa8.41□□□□□ -1.06
SF3B3-201ENST00000302516 EPHB4P54760 987 aa8.41□□□□□ -1.06
SF3B3-201ENST00000302516 SEPT2Q15019 361 aa8.41□□□□□ -1.06
SF3B3-201ENST00000302516 CCHCR1Q8TD31 782 aa8.41□□□□□ -1.06
SF3B3-201ENST00000302516 RNF14Q9UBS8 474 aa8.41□□□□□ -1.06
SF3B3-201ENST00000302516 C2CD5Q86YS7 1000 aa8.41□□□□□ -1.06
SF3B3-201ENST00000302516 SLFN12Q8IYM2 578 aa8.41□□□□□ -1.06
SF3B3-201ENST00000302516 RBM17Q96I25 401 aaKnown RBP8.41□□□□□ -1.06
SF3B3-201ENST00000302516 EPS15L1Q9UBC2 864 aa8.41□□□□□ -1.06
SF3B3-201ENST00000302516 IQSEC3Q9UPP2 1182 aaPredicted RBP8.41□□□□□ -1.06
SF3B3-201ENST00000302516 NIP7Q9Y221 180 aaKnown RBP eCLIP8.41□□□□□ -1.067e-12■■■□□ 14.7
SF3B3-201ENST00000302516 RNMTO43148 476 aaKnown RBP8.41□□□□□ -1.06
SF3B3-201ENST00000302516 PICALMQ13492 652 aa8.41□□□□□ -1.06
SF3B3-201ENST00000302516 LONRF2Q1L5Z9 754 aa8.41□□□□□ -1.06
SF3B3-201ENST00000302516 DIS3L2Q8IYB7 885 aaKnown RBP8.41□□□□□ -1.06
SF3B3-201ENST00000302516 CCDC13Q8IYE1 715 aa8.41□□□□□ -1.06
SF3B3-201ENST00000302516 SLF1Q9BQI6 1058 aa8.41□□□□□ -1.06
SF3B3-201ENST00000302516 LRRD1A4D1F6 860 aa8.41□□□□□ -1.06
SF3B3-201ENST00000302516 CMA1P23946 247 aa8.41□□□□□ -1.06
SF3B3-201ENST00000302516 SLC4A8Q2Y0W8 1093 aa8.41□□□□□ -1.06
SF3B3-201ENST00000302516 DZIP3Q86Y13 1208 aaKnown RBP8.41□□□□□ -1.06
SF3B3-201ENST00000302516 MGEA5O60502 916 aa8.41□□□□□ -1.06
SF3B3-201ENST00000302516 LMNB1P20700 586 aa8.41□□□□□ -1.06
SF3B3-201ENST00000302516 ABCD1P33897 745 aa8.41□□□□□ -1.06
SF3B3-201ENST00000302516 ETF1P62495 437 aaKnown RBP8.41□□□□□ -1.06
SF3B3-201ENST00000302516 SLMAPQ14BN4 828 aa8.41□□□□□ -1.06
SF3B3-201ENST00000302516 NSMCE1Q8WV22 266 aa8.41□□□□□ -1.06
SF3B3-201ENST00000302516 STAG1Q8WVM7 1258 aa8.41□□□□□ -1.06
SF3B3-201ENST00000302516 DDX27Q96GQ7 796 aaKnown RBP8.41□□□□□ -1.06
SF3B3-201ENST00000302516 TAB2Q9NYJ8 693 aa8.41□□□□□ -1.06
SF3B3-201ENST00000302516 RASA3Q14644 834 aa8.41□□□□□ -1.06
SF3B3-201ENST00000302516 KRT40Q6A162 431 aa8.41□□□□□ -1.06
SF3B3-201ENST00000302516 FBXO41Q8TF61 875 aa8.41□□□□□ -1.06
SF3B3-201ENST00000302516 RSAD2Q8WXG1 361 aa8.41□□□□□ -1.06
SF3B3-201ENST00000302516 SDCCAG3Q96C92 435 aa8.41□□□□□ -1.06
SF3B3-201ENST00000302516 CALR3Q96L12 384 aaKnown RBP8.41□□□□□ -1.06
SF3B3-201ENST00000302516 FAM81BQ96LP2 452 aa8.41□□□□□ -1.06
SF3B3-201ENST00000302516 ARPP21Q9UBL0 812 aaPredicted RBP8.41□□□□□ -1.06
SF3B3-201ENST00000302516 ARHGAP4P98171 946 aa8.41□□□□□ -1.06
SF3B3-201ENST00000302516 DEUP1Q05D60 604 aa8.41□□□□□ -1.06
SF3B3-201ENST00000302516 TYW1BQ6NUM6 668 aa8.41□□□□□ -1.06
SF3B3-201ENST00000302516 MIER3Q7Z3K6 550 aa8.41□□□□□ -1.06
SF3B3-201ENST00000302516 EXOC4Q96A65 974 aa8.41□□□□□ -1.06
SF3B3-201ENST00000302516 TRIM11Q96F44 468 aa8.41□□□□□ -1.06
SF3B3-201ENST00000302516 ACTR5Q9H9F9 607 aaPredicted RBP8.41□□□□□ -1.06
SF3B3-201ENST00000302516 B4E1Z4 1266 aa8.4□□□□□ -1.06
SF3B3-201ENST00000302516 BACH1O14867 736 aa8.4□□□□□ -1.06
SF3B3-201ENST00000302516 PFKFB2O60825 505 aa8.4□□□□□ -1.06
SF3B3-201ENST00000302516 SATB1Q01826 763 aa8.4□□□□□ -1.06
SF3B3-201ENST00000302516 KLHL7Q8IXQ5 586 aa8.4□□□□□ -1.06
SF3B3-201ENST00000302516 CCDC197Q8NCU1 140 aa8.4□□□□□ -1.06
SF3B3-201ENST00000302516 PRPF31Q8WWY3 499 aaKnown RBP8.4□□□□□ -1.06
SF3B3-201ENST00000302516 DBN1Q16643 649 aa8.4□□□□□ -1.06
SF3B3-201ENST00000302516 CEP170Q5SW79 1584 aa8.4□□□□□ -1.06
SF3B3-201ENST00000302516 ALS2CLQ60I27 953 aa8.4□□□□□ -1.06
SF3B3-201ENST00000302516 PPP1R21Q6ZMI0 780 aa8.4□□□□□ -1.06
SF3B3-201ENST00000302516 ATP5JP18859 108 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms