RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 HPSEQ9Y251 543 aa16.7■□□□□ 0.26
SMG8-201ENST00000300917 KRBA2Q6ZNG9 492 aa16.7■□□□□ 0.26
SMG8-201ENST00000300917 PLA2G4DQ86XP0 818 aa16.7■□□□□ 0.26
SMG8-201ENST00000300917 NLGN1Q8N2Q7 840 aa16.7■□□□□ 0.26
SMG8-201ENST00000300917 CRAMP1Q96RY5 1269 aa16.7■□□□□ 0.26
SMG8-201ENST00000300917 BRMS1Q9HCU9 246 aa16.7■□□□□ 0.26
SMG8-201ENST00000300917 FAM13BQ9NYF5 915 aa16.7■□□□□ 0.26
SMG8-201ENST00000300917 FAM196BA6NMK8 535 aa16.69■□□□□ 0.26
SMG8-201ENST00000300917 ATP1A3P13637 1013 aa16.69■□□□□ 0.26
SMG8-201ENST00000300917 HOXA10P31260 410 aaPredicted RBP16.69■□□□□ 0.26
SMG8-201ENST00000300917 RHBDL3P58872 404 aa16.69■□□□□ 0.26
SMG8-201ENST00000300917 TYW1BQ6NUM6 668 aa16.69■□□□□ 0.26
SMG8-201ENST00000300917 KIAA0825Q8IV33 1275 aa16.69■□□□□ 0.26
SMG8-201ENST00000300917 UBA5Q9GZZ9 404 aa16.69■□□□□ 0.26
SMG8-201ENST00000300917 PCP11498 1178 aaKnown RBP16.69■□□□□ 0.26
SMG8-201ENST00000300917 PTPREP23469 700 aa16.69■□□□□ 0.26
SMG8-201ENST00000300917 RBM5P52756 815 aaKnown RBP eCLIP16.69■□□□□ 0.26
SMG8-201ENST00000300917 RBM6P78332 1123 aaKnown RBP16.69■□□□□ 0.26
SMG8-201ENST00000300917 TCP10Q12799 353 aa16.69■□□□□ 0.26
SMG8-201ENST00000300917 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.69■□□□□ 0.26
SMG8-201ENST00000300917 ATP6V0A2Q9Y487 856 aa16.69■□□□□ 0.26
SMG8-201ENST00000300917 GPR75-ASB3A0A0A6YYF3 556 aa16.69■□□□□ 0.26
SMG8-201ENST00000300917 KIF5BP33176 963 aa16.69■□□□□ 0.26
SMG8-201ENST00000300917 NLRP12P59046 1061 aa16.69■□□□□ 0.26
SMG8-201ENST00000300917 NPY5RQ15761 445 aa16.69■□□□□ 0.26
SMG8-201ENST00000300917 SLC35G1Q2M3R5 365 aa16.69■□□□□ 0.26
SMG8-201ENST00000300917 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.69■□□□□ 0.26
SMG8-201ENST00000300917 IFNKQ9P0W0 207 aa16.69■□□□□ 0.26
SMG8-201ENST00000300917 PPP4CP60510 307 aa16.68■□□□□ 0.26
SMG8-201ENST00000300917 PTGDRQ13258 359 aa16.68■□□□□ 0.26
SMG8-201ENST00000300917 LRRC47Q8N1G4 583 aaKnown RBP16.68■□□□□ 0.26
SMG8-201ENST00000300917 TMX4Q9H1E5 349 aaPredicted RBP16.68■□□□□ 0.26
SMG8-201ENST00000300917 FRMPD2Q68DX3 1309 aaPredicted RBP16.68■□□□□ 0.26
SMG8-201ENST00000300917 SRCAPQ6ZRS2 3230 aa16.68■□□□□ 0.26
SMG8-201ENST00000300917 COBLO75128 1261 aa16.68■□□□□ 0.26
SMG8-201ENST00000300917 NID2Q14112 1375 aa16.68■□□□□ 0.26
SMG8-201ENST00000300917 TTC38Q5R3I4 469 aa16.68■□□□□ 0.26
SMG8-201ENST00000300917 SP8Q8IXZ3 490 aa16.68■□□□□ 0.26
SMG8-201ENST00000300917 TRMT44Q8IYL2 757 aaKnown RBP16.68■□□□□ 0.26
SMG8-201ENST00000300917 CACTINQ8WUQ7 758 aaKnown RBP16.68■□□□□ 0.26
SMG8-201ENST00000300917 CEP95Q96GE4 821 aa16.68■□□□□ 0.26
SMG8-201ENST00000300917 DDX4Q9NQI0 724 aaKnown RBP16.68■□□□□ 0.26
SMG8-201ENST00000300917 FAM205AQ6ZU69 1335 aa16.67■□□□□ 0.26
SMG8-201ENST00000300917 A0A087X0B3 334 aa16.67■□□□□ 0.26
SMG8-201ENST00000300917 CYTH3O43739 400 aa16.67■□□□□ 0.26
SMG8-201ENST00000300917 RCAN1P53805 252 aa16.67■□□□□ 0.26
SMG8-201ENST00000300917 PPP2R5BQ15173 497 aa16.67■□□□□ 0.26
SMG8-201ENST00000300917 USP40Q9NVE5 1235 aa16.67■□□□□ 0.26
SMG8-201ENST00000300917 UBR3Q6ZT12 1888 aa16.67■□□□□ 0.26
SMG8-201ENST00000300917 MPHOSPH10O00566 681 aaKnown RBP16.67■□□□□ 0.26
SMG8-201ENST00000300917 SYMPKQ92797 1274 aaKnown RBP16.67■□□□□ 0.26
SMG8-201ENST00000300917 PLIN2Q99541 437 aa16.67■□□□□ 0.26
SMG8-201ENST00000300917 PDGFDQ9GZP0 370 aaPredicted RBP16.67■□□□□ 0.26
SMG8-201ENST00000300917 MAD2L2Q9UI95 211 aa16.67■□□□□ 0.26
SMG8-201ENST00000300917 ECM29Q5VYK3 1845 aa16.66■□□□□ 0.26
SMG8-201ENST00000300917 KLRF2D3W0D1 207 aa16.66■□□□□ 0.26
SMG8-201ENST00000300917 PFKFB3Q16875 520 aaPredicted RBP16.66■□□□□ 0.26
SMG8-201ENST00000300917 KLHL10Q6JEL2 608 aa16.66■□□□□ 0.26
SMG8-201ENST00000300917 C2CD5Q86YS7 1000 aa16.66■□□□□ 0.26
SMG8-201ENST00000300917 XPO4Q9C0E2 1151 aaKnown RBP16.66■□□□□ 0.26
SMG8-201ENST00000300917 BRWD3Q6RI45 1802 aa16.66■□□□□ 0.26
SMG8-201ENST00000300917 DGKHQ86XP1 1220 aa16.66■□□□□ 0.26
SMG8-201ENST00000300917 NPR1P16066 1061 aa16.65■□□□□ 0.26
SMG8-201ENST00000300917 BMP6P22004 513 aa16.65■□□□□ 0.26
SMG8-201ENST00000300917 EN1Q05925 392 aaPredicted RBP16.65■□□□□ 0.26
SMG8-201ENST00000300917 NFIAQ12857 509 aa16.65■□□□□ 0.26
SMG8-201ENST00000300917 AKT1S1Q96B36 256 aa16.65■□□□□ 0.26
SMG8-201ENST00000300917 CEP131Q9UPN4 1083 aa16.65■□□□□ 0.26
SMG8-201ENST00000300917 SRPRBQ9Y5M8 271 aaKnown RBP16.65■□□□□ 0.26
SMG8-201ENST00000300917 CAVIN2O95810 425 aa16.65■□□□□ 0.26
SMG8-201ENST00000300917 POSTNQ15063 836 aa16.65■□□□□ 0.26
SMG8-201ENST00000300917 SMYD4Q8IYR2 804 aaPredicted RBP16.65■□□□□ 0.26
SMG8-201ENST00000300917 SHROOM1Q2M3G4 852 aaPredicted RBP16.65■□□□□ 0.26
SMG8-201ENST00000300917 WWC2Q6AWC2 1192 aa16.65■□□□□ 0.26
SMG8-201ENST00000300917 C15orf52Q6ZUT6 534 aaKnown RBP16.65■□□□□ 0.26
SMG8-201ENST00000300917 ZFPM1Q8IX07 1006 aa16.65■□□□□ 0.26
SMG8-201ENST00000300917 TBC1D22AQ8WUA7 517 aa16.65■□□□□ 0.26
SMG8-201ENST00000300917 TSC1Q92574 1164 aa16.65■□□□□ 0.26
SMG8-201ENST00000300917 USP17L5A8MUK1 530 aa16.64■□□□□ 0.25
SMG8-201ENST00000300917 INF2Q27J81 1249 aa16.64■□□□□ 0.25
SMG8-201ENST00000300917 TMC6Q7Z403 805 aa16.64■□□□□ 0.25
SMG8-201ENST00000300917 GPCPD1Q9NPB8 672 aa16.64■□□□□ 0.25
SMG8-201ENST00000300917 AKR1B1P15121 316 aa16.64■□□□□ 0.25
SMG8-201ENST00000300917 KIAA1524Q8TCG1 905 aa16.64■□□□□ 0.25
SMG8-201ENST00000300917 UIMC1Q96RL1 719 aa16.64■□□□□ 0.25
SMG8-201ENST00000300917 COA1Q9GZY4 146 aa16.64■□□□□ 0.25
SMG8-201ENST00000300917 BLZF1Q9H2G9 400 aa16.64■□□□□ 0.25
SMG8-201ENST00000300917 STX17P56962 302 aa16.64■□□□□ 0.25
SMG8-201ENST00000300917 GOLGA8FQ08AF8 430 aa16.64■□□□□ 0.25
SMG8-201ENST00000300917 GOLGA8DPQ0D2H9 430 aa16.64■□□□□ 0.25
SMG8-201ENST00000300917 ZSCAN29Q8IWY8 852 aaPredicted RBP16.64■□□□□ 0.25
SMG8-201ENST00000300917 BLIDQ8IZY5 108 aa16.64■□□□□ 0.25
SMG8-201ENST00000300917 RXRBP28702 533 aa16.63■□□□□ 0.25
SMG8-201ENST00000300917 NCAPHQ15003 741 aa16.63■□□□□ 0.25
SMG8-201ENST00000300917 EZH2Q15910 746 aaKnown RBP16.63■□□□□ 0.25
SMG8-201ENST00000300917 C16orf86Q6ZW13 317 aa16.63■□□□□ 0.25
SMG8-201ENST00000300917 RASSF8Q8NHQ8 419 aa16.63■□□□□ 0.25
SMG8-201ENST00000300917 DPF2Q92785 391 aa16.63■□□□□ 0.25
SMG8-201ENST00000300917 C16orf45Q96MC5 204 aaPredicted RBP16.63■□□□□ 0.25
SMG8-201ENST00000300917 FANCLQ9NW38 375 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms