RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 ZBTB12Q9Y330 459 aaPredicted RBP29.58■■■□□ 2.33
SDCCAG3-201ENST00000298537 WNT7AO00755 349 aa29.57■■■□□ 2.32
SDCCAG3-201ENST00000298537 KIF5BP33176 963 aa29.57■■■□□ 2.32
SDCCAG3-201ENST00000298537 PRMT6Q96LA8 375 aaPredicted RBP29.57■■■□□ 2.32
SDCCAG3-201ENST00000298537 PCDHB6Q9Y5E3 794 aa29.57■■■□□ 2.32
SDCCAG3-201ENST00000298537 MRVI1Q9Y6F6 885 aa29.57■■■□□ 2.32
SDCCAG3-201ENST00000298537 MRPS27Q92552 414 aaKnown RBP29.57■■■□□ 2.32
SDCCAG3-201ENST00000298537 A0A087WWV3 80 aa29.56■■■□□ 2.32
SDCCAG3-201ENST00000298537 SCG2P13521 617 aa29.56■■■□□ 2.32
SDCCAG3-201ENST00000298537 R3HDM1Q15032 1099 aaKnown RBP29.56■■■□□ 2.32
SDCCAG3-201ENST00000298537 CFAP100Q494V2 611 aa29.56■■■□□ 2.32
SDCCAG3-201ENST00000298537 RTKN2Q8IZC4 609 aa29.56■■■□□ 2.32
SDCCAG3-201ENST00000298537 PSMD14O00487 310 aa29.56■■■□□ 2.32
SDCCAG3-201ENST00000298537 PFKFB3Q16875 520 aaPredicted RBP29.56■■■□□ 2.32
SDCCAG3-201ENST00000298537 TYW1BQ6NUM6 668 aa29.56■■■□□ 2.32
SDCCAG3-201ENST00000298537 CCDC73Q6ZRK6 1079 aa29.56■■■□□ 2.32
SDCCAG3-201ENST00000298537 LRRC47Q8N1G4 583 aaKnown RBP29.56■■■□□ 2.32
SDCCAG3-201ENST00000298537 PSMD1Q99460 953 aa29.56■■■□□ 2.32
SDCCAG3-201ENST00000298537 MRIQ9BWK5 157 aa29.56■■■□□ 2.32
SDCCAG3-201ENST00000298537 SERPINA10Q9UK55 444 aa29.56■■■□□ 2.32
SDCCAG3-201ENST00000298537 FAM160A1Q05DH4 1040 aa29.55■■■□□ 2.32
SDCCAG3-201ENST00000298537 CCDC178Q5BJE1 867 aa29.55■■■□□ 2.32
SDCCAG3-201ENST00000298537 FMR1NBQ8N0W7 255 aaPredicted RBP29.55■■■□□ 2.32
SDCCAG3-201ENST00000298537 PALM3A6NDB9 673 aaPredicted RBP29.55■■■□□ 2.32
SDCCAG3-201ENST00000298537 GRIN1Q05586 938 aa29.55■■■□□ 2.32
SDCCAG3-201ENST00000298537 RBM43Q6ZSC3 357 aaKnown RBP29.55■■■□□ 2.32
SDCCAG3-201ENST00000298537 SRCAPQ6ZRS2 3230 aa29.54■■■□□ 2.32
SDCCAG3-201ENST00000298537 NT5C2P49902 561 aa29.54■■■□□ 2.32
SDCCAG3-201ENST00000298537 MTMR4Q9NYA4 1195 aa29.54■■■□□ 2.32
SDCCAG3-201ENST00000298537 A0A1W2PQ27 194 aa29.54■■■□□ 2.32
SDCCAG3-201ENST00000298537 A0A1W2PQ64 194 aa29.54■■■□□ 2.32
SDCCAG3-201ENST00000298537 A0A1W2PQD8 194 aa29.54■■■□□ 2.32
SDCCAG3-201ENST00000298537 USP17L5A8MUK1 530 aa29.54■■■□□ 2.32
SDCCAG3-201ENST00000298537 KRT2P35908 639 aa29.54■■■□□ 2.32
SDCCAG3-201ENST00000298537 HDLBPQ00341 1268 aaKnown RBP29.54■■■□□ 2.32
SDCCAG3-201ENST00000298537 KLHL34Q8N239 644 aa29.54■■■□□ 2.32
SDCCAG3-201ENST00000298537 XBP1P17861 261 aa29.53■■■□□ 2.32
SDCCAG3-201ENST00000298537 NOVP48745 357 aa29.53■■■□□ 2.32
SDCCAG3-201ENST00000298537 TYRO3Q06418 890 aa29.53■■■□□ 2.32
SDCCAG3-201ENST00000298537 SIPA1L1O43166 1804 aa29.53■■■□□ 2.32
SDCCAG3-201ENST00000298537 IGKV6D-41A0A0C4DH26 115 aa29.53■■■□□ 2.32
SDCCAG3-201ENST00000298537 SPECC1Q5M775 1068 aa29.53■■■□□ 2.32
SDCCAG3-201ENST00000298537 SHC4Q6S5L8 630 aa29.53■■■□□ 2.32
SDCCAG3-201ENST00000298537 TNFRSF25Q93038 417 aa29.53■■■□□ 2.32
SDCCAG3-201ENST00000298537 KIF13BQ9NQT8 1826 aa29.52■■■□□ 2.32
SDCCAG3-201ENST00000298537 KLRF2D3W0D1 207 aa29.52■■■□□ 2.32
SDCCAG3-201ENST00000298537 TOP1P11387 765 aaKnown RBP29.52■■■□□ 2.32
SDCCAG3-201ENST00000298537 ZSCAN29Q8IWY8 852 aaPredicted RBP29.52■■■□□ 2.32
SDCCAG3-201ENST00000298537 IDI2Q9BXS1 227 aa29.52■■■□□ 2.32
SDCCAG3-201ENST00000298537 HLA-DOAP06340 250 aa29.51■■■□□ 2.32
SDCCAG3-201ENST00000298537 PIM2Q9P1W9 311 aa29.51■■■□□ 2.32
SDCCAG3-201ENST00000298537 FRMPD2Q68DX3 1309 aaPredicted RBP29.51■■■□□ 2.32
SDCCAG3-201ENST00000298537 MPHOSPH10O00566 681 aaKnown RBP29.51■■■□□ 2.31
SDCCAG3-201ENST00000298537 PFKFB1P16118 471 aa29.51■■■□□ 2.31
SDCCAG3-201ENST00000298537 RSBN1LQ6PCB5 846 aaPredicted RBP29.51■■■□□ 2.31
SDCCAG3-201ENST00000298537 UBA5Q9GZZ9 404 aa29.51■■■□□ 2.31
SDCCAG3-201ENST00000298537 CLIP2Q9UDT6 1046 aa29.51■■■□□ 2.31
SDCCAG3-201ENST00000298537 PLIN4Q96Q06 1357 aa29.5■■■□□ 2.31
SDCCAG3-201ENST00000298537 CCDC192P0DO97 292 aa29.5■■■□□ 2.31
SDCCAG3-201ENST00000298537 NLRP5P59047 1200 aa29.5■■■□□ 2.31
SDCCAG3-201ENST00000298537 PPP6R2O75170 966 aa29.5■■■□□ 2.31
SDCCAG3-201ENST00000298537 MYH8P13535 1937 aa29.49■■■□□ 2.31
SDCCAG3-201ENST00000298537 KINO60870 393 aaKnown RBP29.49■■■□□ 2.31
SDCCAG3-201ENST00000298537 RILPL1Q5EBL4 403 aa29.49■■■□□ 2.31
SDCCAG3-201ENST00000298537 WWC2Q6AWC2 1192 aa29.49■■■□□ 2.31
SDCCAG3-201ENST00000298537 MTFR1LQ9H019 292 aa29.49■■■□□ 2.31
SDCCAG3-201ENST00000298537 VAT1LQ9HCJ6 419 aa29.49■■■□□ 2.31
SDCCAG3-201ENST00000298537 SWAP70Q9UH65 585 aa29.49■■■□□ 2.31
SDCCAG3-201ENST00000298537 CLRN2A0PK11 232 aa29.49■■■□□ 2.31
SDCCAG3-201ENST00000298537 PARP1P09874 1014 aaKnown RBP29.49■■■□□ 2.31
SDCCAG3-201ENST00000298537 RASGRP4Q8TDF6 673 aa29.49■■■□□ 2.31
SDCCAG3-201ENST00000298537 VIL1P09327 827 aaKnown RBP29.48■■■□□ 2.31
SDCCAG3-201ENST00000298537 GMLQ99445 158 aa29.48■■■□□ 2.31
SDCCAG3-201ENST00000298537 PSDA5PKW4 1024 aaPredicted RBP29.48■■■□□ 2.31
SDCCAG3-201ENST00000298537 PDHBP11177 359 aa29.48■■■□□ 2.31
SDCCAG3-201ENST00000298537 CMA1P23946 247 aa29.48■■■□□ 2.31
SDCCAG3-201ENST00000298537 ATP2B2Q01814 1243 aa29.48■■■□□ 2.31
SDCCAG3-201ENST00000298537 HOMER1Q86YM7 354 aa29.48■■■□□ 2.31
SDCCAG3-201ENST00000298537 ANO6Q4KMQ2 910 aa29.47■■■□□ 2.31
SDCCAG3-201ENST00000298537 CCDC125Q86Z20 511 aa29.47■■■□□ 2.31
SDCCAG3-201ENST00000298537 EIF4ENIF1Q9NRA8 985 aaKnown RBP29.47■■■□□ 2.31
SDCCAG3-201ENST00000298537 TGFB2P61812 414 aa29.46■■■□□ 2.31
SDCCAG3-201ENST00000298537 HEATR3Q7Z4Q2 680 aa29.46■■■□□ 2.31
SDCCAG3-201ENST00000298537 PPP1R9BQ96SB3 815 aa29.46■■■□□ 2.31
SDCCAG3-201ENST00000298537 SHTN1A0MZ66 631 aa29.46■■■□□ 2.31
SDCCAG3-201ENST00000298537 ZNF202O95125 648 aa29.46■■■□□ 2.31
SDCCAG3-201ENST00000298537 POLD1P28340 1107 aa29.46■■■□□ 2.31
SDCCAG3-201ENST00000298537 GNAQP50148 359 aa29.46■■■□□ 2.31
SDCCAG3-201ENST00000298537 PIK3AP1Q6ZUJ8 805 aa29.46■■■□□ 2.31
SDCCAG3-201ENST00000298537 EHD4Q9H223 541 aa29.46■■■□□ 2.31
SDCCAG3-201ENST00000298537 TCP10L2B9ZVM9 353 aa29.45■■■□□ 2.31
SDCCAG3-201ENST00000298537 FBXO2Q9UK22 296 aaPredicted RBP29.45■■■□□ 2.31
SDCCAG3-201ENST00000298537 JAG1P78504 1218 aa29.45■■■□□ 2.3
SDCCAG3-201ENST00000298537 CCDC173Q0VFZ6 552 aa29.45■■■□□ 2.3
SDCCAG3-201ENST00000298537 DALRD3Q5D0E6 543 aaKnown RBP29.45■■■□□ 2.3
SDCCAG3-201ENST00000298537 PI4KBQ9UBF8 816 aa29.45■■■□□ 2.3
SDCCAG3-201ENST00000298537 GRIPAP1Q4V328 841 aa29.44■■■□□ 2.3
SDCCAG3-201ENST00000298537 DNAJC25Q9H1X3 360 aa29.44■■■□□ 2.3
SDCCAG3-201ENST00000298537 USP25Q9UHP3 1055 aa29.44■■■□□ 2.3
SDCCAG3-201ENST00000298537 PSME4Q14997 1843 aa29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms