RNA–Protein interactions for RNA: ENST00000298428.13

SEC61A2-201, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A2, Length 1,893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-201ENST00000298428 SHROOM1Q2M3G4 852 aaPredicted RBP21.47■■□□□ 1.03
SEC61A2-201ENST00000298428 LRRC47Q8N1G4 583 aaKnown RBP21.47■■□□□ 1.03
SEC61A2-201ENST00000298428 GJB4Q9NTQ9 266 aa21.47■■□□□ 1.03
SEC61A2-201ENST00000298428 PRPF3O43395 683 aaKnown RBP21.47■■□□□ 1.03
SEC61A2-201ENST00000298428 GNAQP50148 359 aa21.47■■□□□ 1.03
SEC61A2-201ENST00000298428 TRIM29Q14134 588 aa21.47■■□□□ 1.03
SEC61A2-201ENST00000298428 STAG2Q8N3U4 1231 aa21.47■■□□□ 1.03
SEC61A2-201ENST00000298428 TRPM4Q8TD43 1214 aa21.47■■□□□ 1.03
SEC61A2-201ENST00000298428 KANSL2Q9H9L4 492 aa21.47■■□□□ 1.03
SEC61A2-201ENST00000298428 TBC1D12O60347 775 aa21.46■■□□□ 1.03
SEC61A2-201ENST00000298428 EPS15P42566 896 aa21.46■■□□□ 1.03
SEC61A2-201ENST00000298428 ATP2B2Q01814 1243 aa21.46■■□□□ 1.03
SEC61A2-201ENST00000298428 DNM1Q05193 864 aaKnown RBP21.46■■□□□ 1.03
SEC61A2-201ENST00000298428 PALM3A6NDB9 673 aaPredicted RBP21.45■■□□□ 1.02
SEC61A2-201ENST00000298428 PARP1P09874 1014 aaKnown RBP21.45■■□□□ 1.02
SEC61A2-201ENST00000298428 SEPT2Q15019 361 aa21.45■■□□□ 1.02
SEC61A2-201ENST00000298428 RASGRP2Q7LDG7 609 aa21.45■■□□□ 1.02
SEC61A2-201ENST00000298428 CABP5Q9NP86 173 aa21.45■■□□□ 1.02
SEC61A2-201ENST00000298428 V9GY48 417 aaPredicted RBP21.45■■□□□ 1.02
SEC61A2-201ENST00000298428 GH2P01242 217 aa21.45■■□□□ 1.02
SEC61A2-201ENST00000298428 NCLP19338 710 aaKnown RBP21.45■■□□□ 1.02
SEC61A2-201ENST00000298428 RRP1BQ14684 758 aaKnown RBP21.45■■□□□ 1.02
SEC61A2-201ENST00000298428 KRT40Q6A162 431 aa21.45■■□□□ 1.02
SEC61A2-201ENST00000298428 FAM173BQ6P4H8 233 aa21.45■■□□□ 1.02
SEC61A2-201ENST00000298428 MIGA2Q7L4E1 593 aa21.45■■□□□ 1.02
SEC61A2-201ENST00000298428 CNPY2Q9Y2B0 182 aa21.45■■□□□ 1.02
SEC61A2-201ENST00000298428 MYH6P13533 1939 aa21.44■■□□□ 1.02
SEC61A2-201ENST00000298428 PDHBP11177 359 aa21.44■■□□□ 1.02
SEC61A2-201ENST00000298428 LMOD1P29536 600 aaPredicted RBP21.44■■□□□ 1.02
SEC61A2-201ENST00000298428 ICA1Q05084 483 aa21.44■■□□□ 1.02
SEC61A2-201ENST00000298428 TEPSINQ96N21 525 aa21.44■■□□□ 1.02
SEC61A2-201ENST00000298428 LZTS2Q9BRK4 669 aa21.44■■□□□ 1.02
SEC61A2-201ENST00000298428 NYAP2Q9P242 653 aa21.44■■□□□ 1.02
SEC61A2-201ENST00000298428 MYH4Q9Y623 1939 aa21.43■■□□□ 1.02
SEC61A2-201ENST00000298428 hCG_1642624A0A1W2PR95 340 aa21.43■■□□□ 1.02
SEC61A2-201ENST00000298428 USP17L5A8MUK1 530 aa21.43■■□□□ 1.02
SEC61A2-201ENST00000298428 PRPF40AO75400 957 aaKnown RBP21.43■■□□□ 1.02
SEC61A2-201ENST00000298428 GOLGA8HP0CJ92 632 aa21.43■■□□□ 1.02
SEC61A2-201ENST00000298428 EEF2P13639 858 aaKnown RBP21.43■■□□□ 1.02
SEC61A2-201ENST00000298428 PKN1Q16512 942 aa21.43■■□□□ 1.02
SEC61A2-201ENST00000298428 ANGEL2Q5VTE6 544 aaKnown RBP21.43■■□□□ 1.02
SEC61A2-201ENST00000298428 USP17L2Q6R6M4 530 aa21.43■■□□□ 1.02
SEC61A2-201ENST00000298428 APOBEC3FQ8IUX4 373 aaKnown RBP21.43■■□□□ 1.02
SEC61A2-201ENST00000298428 DEFB129Q9H1M3 183 aa21.43■■□□□ 1.02
SEC61A2-201ENST00000298428 LMBRD1Q9NUN5 540 aa21.43■■□□□ 1.02
SEC61A2-201ENST00000298428 KLRF2D3W0D1 207 aa21.43■■□□□ 1.02
SEC61A2-201ENST00000298428 KRT85P78386 507 aa21.43■■□□□ 1.02
SEC61A2-201ENST00000298428 JAG1P78504 1218 aa21.43■■□□□ 1.02
SEC61A2-201ENST00000298428 GDPD2Q9HCC8 539 aa21.43■■□□□ 1.02
SEC61A2-201ENST00000298428 RBM27Q9P2N5 1060 aaKnown RBP21.43■■□□□ 1.02
SEC61A2-201ENST00000298428 TCHHQ07283 1943 aa21.43■■□□□ 1.02
SEC61A2-201ENST00000298428 GRIN3BO60391 1043 aa21.42■■□□□ 1.02
SEC61A2-201ENST00000298428 SNHG28P0DPA3 235 aa21.42■■□□□ 1.02
SEC61A2-201ENST00000298428 MAP3K10Q02779 954 aa21.42■■□□□ 1.02
SEC61A2-201ENST00000298428 MKL1Q969V6 931 aa21.42■■□□□ 1.02
SEC61A2-201ENST00000298428 FIBPO43427 364 aa21.41■■□□□ 1.02
SEC61A2-201ENST00000298428 XBP1P17861 261 aa21.41■■□□□ 1.02
SEC61A2-201ENST00000298428 HIRAP54198 1017 aaPredicted RBP21.41■■□□□ 1.02
SEC61A2-201ENST00000298428 KIF23Q02241 960 aaPredicted RBP21.41■■□□□ 1.02
SEC61A2-201ENST00000298428 GGA3Q9NZ52 723 aa21.41■■□□□ 1.02
SEC61A2-201ENST00000298428 TRAK2O60296 914 aa21.41■■□□□ 1.02
SEC61A2-201ENST00000298428 ASPRV1Q53RT3 343 aa21.41■■□□□ 1.02
SEC61A2-201ENST00000298428 DPY19L2Q6NUT2 758 aa21.41■■□□□ 1.02
SEC61A2-201ENST00000298428 PIBF1Q8WXW3 757 aa21.41■■□□□ 1.02
SEC61A2-201ENST00000298428 ADARB2Q9NS39 739 aaKnown RBP21.41■■□□□ 1.02
SEC61A2-201ENST00000298428 MMP1P03956 469 aa21.4■■□□□ 1.02
SEC61A2-201ENST00000298428 BRAPQ7Z569 592 aa21.4■■□□□ 1.02
SEC61A2-201ENST00000298428 USP48Q86UV5 1035 aa21.4■■□□□ 1.02
SEC61A2-201ENST00000298428 SIAH1Q8IUQ4 282 aa21.4■■□□□ 1.02
SEC61A2-201ENST00000298428 TMEM87AQ8NBN3 555 aa21.4■■□□□ 1.02
SEC61A2-201ENST00000298428 SPZ1Q9BXG8 430 aa21.4■■□□□ 1.02
SEC61A2-201ENST00000298428 ZBTB21Q9ULJ3 1066 aa21.4■■□□□ 1.02
SEC61A2-201ENST00000298428 KCNJ14Q9UNX9 436 aa21.4■■□□□ 1.02
SEC61A2-201ENST00000298428 FRMPD2Q68DX3 1309 aaPredicted RBP21.4■■□□□ 1.02
SEC61A2-201ENST00000298428 KIF28PB7ZC32 967 aa21.39■■□□□ 1.02
SEC61A2-201ENST00000298428 CYTH3O43739 400 aa21.39■■□□□ 1.02
SEC61A2-201ENST00000298428 SCG2P13521 617 aa21.39■■□□□ 1.02
SEC61A2-201ENST00000298428 GNL2Q13823 731 aaKnown RBP21.39■■□□□ 1.02
SEC61A2-201ENST00000298428 SAFBQ15424 915 aaKnown RBP eCLIP21.39■■□□□ 1.02
SEC61A2-201ENST00000298428 PFKFB3Q16875 520 aaPredicted RBP21.39■■□□□ 1.02
SEC61A2-201ENST00000298428 CSPP1Q1MSJ5 1256 aa21.39■■□□□ 1.02
SEC61A2-201ENST00000298428 SLC35G1Q2M3R5 365 aa21.39■■□□□ 1.02
SEC61A2-201ENST00000298428 VPS54Q9P1Q0 977 aa21.39■■□□□ 1.02
SEC61A2-201ENST00000298428 SMARCA1P28370 1054 aa21.39■■□□□ 1.01
SEC61A2-201ENST00000298428 CAP2P40123 477 aa21.39■■□□□ 1.01
SEC61A2-201ENST00000298428 SKOR2Q2VWA4 1001 aaPredicted RBP21.39■■□□□ 1.01
SEC61A2-201ENST00000298428 BAZ2BQ9UIF8 2168 aaKnown RBP21.39■■□□□ 1.01
SEC61A2-201ENST00000298428 MYH15Q9Y2K3 1946 aa21.38■■□□□ 1.01
SEC61A2-201ENST00000298428 ZNF543Q08ER8 600 aa21.38■■□□□ 1.01
SEC61A2-201ENST00000298428 CPVLQ9H3G5 476 aa21.38■■□□□ 1.01
SEC61A2-201ENST00000298428 TFIP11Q9UBB9 837 aaKnown RBP21.38■■□□□ 1.01
SEC61A2-201ENST00000298428 ZC3H4Q9UPT8 1303 aaKnown RBP21.38■■□□□ 1.01
SEC61A2-201ENST00000298428 RAD21O60216 631 aa21.37■■□□□ 1.01
SEC61A2-201ENST00000298428 CCDC96Q2M329 555 aa21.37■■□□□ 1.01
SEC61A2-201ENST00000298428 GPATCH4Q5T3I0 446 aaKnown RBP21.37■■□□□ 1.01
SEC61A2-201ENST00000298428 NBPF12Q5TAG4 269 aaPredicted RBP21.37■■□□□ 1.01
SEC61A2-201ENST00000298428 SHISA4Q96DD7 197 aa21.37■■□□□ 1.01
SEC61A2-201ENST00000298428 SCAND2PQ9GZW5 306 aaPredicted RBP21.37■■□□□ 1.01
SEC61A2-201ENST00000298428 CFAP45Q9UL16 551 aa21.37■■□□□ 1.01
SEC61A2-201ENST00000298428 PHF20L1A8MW92 1017 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms