RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 ZNF112Q9UJU3 913 aa28.65■■■□□ 2.18
GTF2A1-201ENST00000298173 ZBTB21Q9ULJ3 1066 aa28.65■■■□□ 2.18
GTF2A1-201ENST00000298173 MTMR6Q9Y217 621 aa28.65■■■□□ 2.18
GTF2A1-201ENST00000298173 WDR33Q9C0J8 1336 aaKnown RBP28.65■■■□□ 2.18
GTF2A1-201ENST00000298173 PLEKHA8P1O95397 391 aa28.64■■■□□ 2.18
GTF2A1-201ENST00000298173 ICA1Q05084 483 aa28.64■■■□□ 2.18
GTF2A1-201ENST00000298173 SSRP1Q08945 709 aaKnown RBP28.64■■■□□ 2.18
GTF2A1-201ENST00000298173 DCAF15Q66K64 600 aa28.64■■■□□ 2.18
GTF2A1-201ENST00000298173 LRRC47Q8N1G4 583 aaKnown RBP28.64■■■□□ 2.18
GTF2A1-201ENST00000298173 SRBD1Q8N5C6 995 aaKnown RBP28.64■■■□□ 2.18
GTF2A1-201ENST00000298173 TNPO1Q92973 898 aaKnown RBP28.64■■■□□ 2.18
GTF2A1-201ENST00000298173 STAG2Q8N3U4 1231 aa28.64■■■□□ 2.17
GTF2A1-201ENST00000298173 ATAD5Q96QE3 1844 aa28.63■■■□□ 2.17
GTF2A1-201ENST00000298173 PDHBP11177 359 aa28.63■■■□□ 2.17
GTF2A1-201ENST00000298173 RGS22Q8NE09 1264 aa28.63■■■□□ 2.17
GTF2A1-201ENST00000298173 RNF26Q9BY78 433 aaPredicted RBP28.63■■■□□ 2.17
GTF2A1-201ENST00000298173 SYNPO2Q9UMS6 1093 aa28.63■■■□□ 2.17
GTF2A1-201ENST00000298173 MYH6P13533 1939 aa28.62■■■□□ 2.17
GTF2A1-201ENST00000298173 CTNND1O60716 968 aaKnown RBP28.62■■■□□ 2.17
GTF2A1-201ENST00000298173 ZSCAN22P10073 491 aaPredicted RBP28.62■■■□□ 2.17
GTF2A1-201ENST00000298173 GNAQP50148 359 aa28.62■■■□□ 2.17
GTF2A1-201ENST00000298173 SUPT20HL1Q3ZLR7 823 aa28.62■■■□□ 2.17
GTF2A1-201ENST00000298173 PNMA8AQ86V59 439 aaPredicted RBP28.62■■■□□ 2.17
GTF2A1-201ENST00000298173 SULF1Q8IWU6 871 aa28.62■■■□□ 2.17
GTF2A1-201ENST00000298173 CCDC82Q8N4S0 544 aa28.62■■■□□ 2.17
GTF2A1-201ENST00000298173 SLC26A6Q9BXS9 759 aa28.62■■■□□ 2.17
GTF2A1-201ENST00000298173 ZNF341Q9BYN7 854 aa28.62■■■□□ 2.17
GTF2A1-201ENST00000298173 GINM1Q9NU53 330 aa28.62■■■□□ 2.17
GTF2A1-201ENST00000298173 SSC5DA1L4H1 1573 aa28.62■■■□□ 2.17
GTF2A1-201ENST00000298173 USP17L5A8MUK1 530 aa28.61■■■□□ 2.17
GTF2A1-201ENST00000298173 PRPF3O43395 683 aaKnown RBP28.61■■■□□ 2.17
GTF2A1-201ENST00000298173 ASNSP08243 561 aa28.61■■■□□ 2.17
GTF2A1-201ENST00000298173 ATP2B2Q01814 1243 aa28.61■■■□□ 2.17
GTF2A1-201ENST00000298173 USP17L2Q6R6M4 530 aa28.61■■■□□ 2.17
GTF2A1-201ENST00000298173 RASGRP2Q7LDG7 609 aa28.61■■■□□ 2.17
GTF2A1-201ENST00000298173 TRIM22Q8IYM9 498 aa28.61■■■□□ 2.17
GTF2A1-201ENST00000298173 BAZ2BQ9UIF8 2168 aaKnown RBP28.6■■■□□ 2.17
GTF2A1-201ENST00000298173 A0A1W2PRG0 241 aa28.6■■■□□ 2.17
GTF2A1-201ENST00000298173 UBE2Q2LH0YL09 131 aa28.6■■■□□ 2.17
GTF2A1-201ENST00000298173 PARP1P09874 1014 aaKnown RBP28.6■■■□□ 2.17
GTF2A1-201ENST00000298173 CLEC17AQ6ZS10 378 aa28.6■■■□□ 2.17
GTF2A1-201ENST00000298173 LZTS2Q9BRK4 669 aa28.6■■■□□ 2.17
GTF2A1-201ENST00000298173 CNTNAP5Q8WYK1 1306 aa28.6■■■□□ 2.17
GTF2A1-201ENST00000298173 SMARCA1P28370 1054 aa28.59■■■□□ 2.17
GTF2A1-201ENST00000298173 SLC35G1Q2M3R5 365 aa28.59■■■□□ 2.17
GTF2A1-201ENST00000298173 KRT26Q7Z3Y9 468 aa28.59■■■□□ 2.17
GTF2A1-201ENST00000298173 GMCL1P1Q8NEA9 526 aa28.59■■■□□ 2.17
GTF2A1-201ENST00000298173 MTMR7Q9Y216 660 aa28.59■■■□□ 2.17
GTF2A1-201ENST00000298173 ADM5C9JUS6 153 aa28.58■■■□□ 2.17
GTF2A1-201ENST00000298173 DEXIO95424 95 aa28.58■■■□□ 2.17
GTF2A1-201ENST00000298173 DLK2Q6UY11 383 aa28.58■■■□□ 2.17
GTF2A1-201ENST00000298173 V9GY48 417 aaPredicted RBP28.58■■■□□ 2.17
GTF2A1-201ENST00000298173 DCAF8L1A6NGE4 600 aa28.58■■■□□ 2.16
GTF2A1-201ENST00000298173 KLRF2D3W0D1 207 aa28.58■■■□□ 2.16
GTF2A1-201ENST00000298173 GOLGA8HP0CJ92 632 aa28.58■■■□□ 2.16
GTF2A1-201ENST00000298173 PKN1Q16512 942 aa28.58■■■□□ 2.16
GTF2A1-201ENST00000298173 CDC37L1Q7L3B6 337 aa28.58■■■□□ 2.16
GTF2A1-201ENST00000298173 FBXO18Q8NFZ0 1043 aa28.58■■■□□ 2.16
GTF2A1-201ENST00000298173 KLRG1Q96E93 195 aa28.58■■■□□ 2.16
GTF2A1-201ENST00000298173 AIFM3Q96NN9 605 aa28.58■■■□□ 2.16
GTF2A1-201ENST00000298173 ALG1Q9BT22 464 aa28.58■■■□□ 2.16
GTF2A1-201ENST00000298173 TMX2Q9Y320 296 aa28.58■■■□□ 2.16
GTF2A1-201ENST00000298173 VPS37CA5D8V6 355 aaPredicted RBP28.57■■■□□ 2.16
GTF2A1-201ENST00000298173 CYTH3O43739 400 aa28.57■■■□□ 2.16
GTF2A1-201ENST00000298173 F13A1P00488 732 aa28.57■■■□□ 2.16
GTF2A1-201ENST00000298173 INPP5BP32019 993 aa28.57■■■□□ 2.16
GTF2A1-201ENST00000298173 ZNF543Q08ER8 600 aa28.57■■■□□ 2.16
GTF2A1-201ENST00000298173 ASPRV1Q53RT3 343 aa28.57■■■□□ 2.16
GTF2A1-201ENST00000298173 FOXD4L5Q5VV16 416 aaPredicted RBP28.57■■■□□ 2.16
GTF2A1-201ENST00000298173 FOXD4L4Q8WXT5 416 aaPredicted RBP28.57■■■□□ 2.16
GTF2A1-201ENST00000298173 WASF1Q92558 559 aa28.57■■■□□ 2.16
GTF2A1-201ENST00000298173 FRMD4AQ9P2Q2 1039 aaPredicted RBP28.57■■■□□ 2.16
GTF2A1-201ENST00000298173 F5H6K3 240 aa28.56■■■□□ 2.16
GTF2A1-201ENST00000298173 KLRC3Q07444 240 aa28.56■■■□□ 2.16
GTF2A1-201ENST00000298173 EAPPQ56P03 285 aaPredicted RBP28.56■■■□□ 2.16
GTF2A1-201ENST00000298173 ACER1Q8TDN7 264 aa28.56■■■□□ 2.16
GTF2A1-201ENST00000298173 C8orf76Q96K31 380 aa28.56■■■□□ 2.16
GTF2A1-201ENST00000298173 ARHGEF10LQ9HCE6 1279 aa28.56■■■□□ 2.16
GTF2A1-201ENST00000298173 ECE1P42892 770 aa28.55■■■□□ 2.16
GTF2A1-201ENST00000298173 SLFN13Q68D06 897 aa28.55■■■□□ 2.16
GTF2A1-201ENST00000298173 USP48Q86UV5 1035 aa28.55■■■□□ 2.16
GTF2A1-201ENST00000298173 SPZ1Q9BXG8 430 aa28.55■■■□□ 2.16
GTF2A1-201ENST00000298173 DOCK1Q14185 1865 aa28.55■■■□□ 2.16
GTF2A1-201ENST00000298173 H3BQV1 296 aa28.54■■■□□ 2.16
GTF2A1-201ENST00000298173 USP2O75604 605 aaPredicted RBP28.54■■■□□ 2.16
GTF2A1-201ENST00000298173 IFFO2Q5TF58 517 aa28.54■■■□□ 2.16
GTF2A1-201ENST00000298173 DCAF4Q8WV16 495 aa28.54■■■□□ 2.16
GTF2A1-201ENST00000298173 GJB4Q9NTQ9 266 aa28.54■■■□□ 2.16
GTF2A1-201ENST00000298173 FZD1Q9UP38 647 aa28.54■■■□□ 2.16
GTF2A1-201ENST00000298173 VEGFAP15692 232 aaPredicted RBP28.54■■■□□ 2.16
GTF2A1-201ENST00000298173 AKAP17AQ02040 695 aaKnown RBP28.54■■■□□ 2.16
GTF2A1-201ENST00000298173 GPATCH4Q5T3I0 446 aaKnown RBP28.54■■■□□ 2.16
GTF2A1-201ENST00000298173 GMCL1Q96IK5 515 aa28.54■■■□□ 2.16
GTF2A1-201ENST00000298173 RIOX1Q9H6W3 641 aa28.54■■■□□ 2.16
GTF2A1-201ENST00000298173 OTUD7BQ6GQQ9 843 aa28.53■■■□□ 2.16
GTF2A1-201ENST00000298173 SCYL3Q8IZE3 742 aa28.53■■■□□ 2.16
GTF2A1-201ENST00000298173 WRNIP1Q96S55 665 aa28.53■■■□□ 2.16
GTF2A1-201ENST00000298173 RRAGCQ9HB90 399 aa28.53■■■□□ 2.16
GTF2A1-201ENST00000298173 RBM27Q9P2N5 1060 aaKnown RBP28.53■■■□□ 2.16
GTF2A1-201ENST00000298173 FRMPD2Q68DX3 1309 aaPredicted RBP28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms