RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 MYO1FO00160 1098 aa16.72■□□□□ 0.27
SPIDR-201ENST00000297423 CRKLP46109 303 aaKnown RBP16.72■□□□□ 0.27
SPIDR-201ENST00000297423 PPP2R5AQ15172 486 aa16.72■□□□□ 0.27
SPIDR-201ENST00000297423 BPIFA3Q9BQP9 254 aa16.72■□□□□ 0.27
SPIDR-201ENST00000297423 SLC24A3Q9HC58 644 aa16.72■□□□□ 0.27
SPIDR-201ENST00000297423 SYNRGQ9UMZ2 1314 aa16.72■□□□□ 0.27
SPIDR-201ENST00000297423 COL16A1Q07092 1604 aaPredicted RBP16.72■□□□□ 0.27
SPIDR-201ENST00000297423 CXCR5P32302 372 aa16.72■□□□□ 0.27
SPIDR-201ENST00000297423 USP49Q70CQ1 688 aa16.72■□□□□ 0.27
SPIDR-201ENST00000297423 MAATS1Q7Z4T9 603 aa16.72■□□□□ 0.27
SPIDR-201ENST00000297423 DIS3L2Q8IYB7 885 aaKnown RBP16.72■□□□□ 0.27
SPIDR-201ENST00000297423 PALLDQ8WX93 1383 aa16.72■□□□□ 0.27
SPIDR-201ENST00000297423 CNGA4Q8IV77 575 aa16.71■□□□□ 0.27
SPIDR-201ENST00000297423 ZNF609O15014 1411 aa16.71■□□□□ 0.27
SPIDR-201ENST00000297423 PTPN12Q05209 780 aaKnown RBP16.71■□□□□ 0.27
SPIDR-201ENST00000297423 MLKLQ8NB16 471 aa16.71■□□□□ 0.27
SPIDR-201ENST00000297423 CTCFLQ8NI51 663 aaPredicted RBP16.71■□□□□ 0.27
SPIDR-201ENST00000297423 ISCA1Q9BUE6 129 aa16.71■□□□□ 0.27
SPIDR-201ENST00000297423 TTF2Q9UNY4 1162 aaKnown RBP16.71■□□□□ 0.27
SPIDR-201ENST00000297423 FAM170AA1A519 330 aa16.71■□□□□ 0.27
SPIDR-201ENST00000297423 KCNJ6P48051 423 aa16.71■□□□□ 0.27
SPIDR-201ENST00000297423 HLFQ16534 295 aa16.71■□□□□ 0.27
SPIDR-201ENST00000297423 CCDC96Q2M329 555 aa16.71■□□□□ 0.27
SPIDR-201ENST00000297423 KIRREL3Q8IZU9 778 aa16.71■□□□□ 0.27
SPIDR-201ENST00000297423 OSBP2Q969R2 916 aa16.71■□□□□ 0.27
SPIDR-201ENST00000297423 UBAC1Q9BSL1 405 aa16.71■□□□□ 0.27
SPIDR-201ENST00000297423 CNNM1Q9NRU3 951 aa16.71■□□□□ 0.27
SPIDR-201ENST00000297423 ZNF652Q9Y2D9 606 aa16.71■□□□□ 0.27
SPIDR-201ENST00000297423 SAR1BQ9Y6B6 198 aa16.71■□□□□ 0.27
SPIDR-201ENST00000297423 C5P01031 1676 aa16.71■□□□□ 0.27
SPIDR-201ENST00000297423 MAST3O60307 1309 aa16.71■□□□□ 0.27
SPIDR-201ENST00000297423 MED23Q9ULK4 1368 aa16.71■□□□□ 0.26
SPIDR-201ENST00000297423 GOLGA6L7A0A1B0GV03 622 aa16.7■□□□□ 0.26
SPIDR-201ENST00000297423 MAP2K7O14733 419 aa16.7■□□□□ 0.26
SPIDR-201ENST00000297423 ZNF185O15231 689 aa16.7■□□□□ 0.26
SPIDR-201ENST00000297423 NEBLO76041 1014 aa16.7■□□□□ 0.26
SPIDR-201ENST00000297423 PCCAP05165 728 aaPredicted RBP16.7■□□□□ 0.26
SPIDR-201ENST00000297423 RPSAP08865 295 aaKnown RBP16.7■□□□□ 0.26
SPIDR-201ENST00000297423 HNRNPH1P31943 449 aaKnown RBP16.7■□□□□ 0.26
SPIDR-201ENST00000297423 IL15P40933 162 aaPredicted RBP16.7■□□□□ 0.26
SPIDR-201ENST00000297423 NR5A1Q13285 461 aa16.7■□□□□ 0.26
SPIDR-201ENST00000297423 FXR1P51114 621 aaKnown RBP eCLIP16.7■□□□□ 0.26
SPIDR-201ENST00000297423 ZBTB38Q8NAP3 1195 aaPredicted RBP16.7■□□□□ 0.26
SPIDR-201ENST00000297423 CCDC114Q96M63 670 aa16.7■□□□□ 0.26
SPIDR-201ENST00000297423 SLC4A9Q96Q91 983 aa16.7■□□□□ 0.26
SPIDR-201ENST00000297423 PLCD4Q9BRC7 762 aa16.7■□□□□ 0.26
SPIDR-201ENST00000297423 WWC3Q9ULE0 1092 aa16.7■□□□□ 0.26
SPIDR-201ENST00000297423 ERICH2A1L162 156 aa16.7■□□□□ 0.26
SPIDR-201ENST00000297423 FAM182BQ5T319 152 aa16.7■□□□□ 0.26
SPIDR-201ENST00000297423 ZNF526Q8TF50 670 aaPredicted RBP16.7■□□□□ 0.26
SPIDR-201ENST00000297423 HAUS7Q99871 368 aa16.7■□□□□ 0.26
SPIDR-201ENST00000297423 KCPQ6ZWJ8 1503 aa16.7■□□□□ 0.26
SPIDR-201ENST00000297423 IRS4O14654 1257 aaPredicted RBP16.7■□□□□ 0.26
SPIDR-201ENST00000297423 HSF2BPO75031 334 aa16.7■□□□□ 0.26
SPIDR-201ENST00000297423 TRIM21P19474 475 aaKnown RBP16.7■□□□□ 0.26
SPIDR-201ENST00000297423 RABL6Q3YEC7 729 aaPredicted RBP16.7■□□□□ 0.26
SPIDR-201ENST00000297423 LRRC24Q50LG9 513 aa16.7■□□□□ 0.26
SPIDR-201ENST00000297423 SH2D3CQ8N5H7 860 aa16.7■□□□□ 0.26
SPIDR-201ENST00000297423 ANKRD13CQ8N6S4 541 aa16.7■□□□□ 0.26
SPIDR-201ENST00000297423 MMS19Q96T76 1030 aa16.7■□□□□ 0.26
SPIDR-201ENST00000297423 SUFUQ9UMX1 484 aa16.7■□□□□ 0.26
SPIDR-201ENST00000297423 USP42Q9H9J4 1324 aaKnown RBP16.69■□□□□ 0.26
SPIDR-201ENST00000297423 COL22A1Q8NFW1 1626 aaPredicted RBP16.69■□□□□ 0.26
SPIDR-201ENST00000297423 CCDC172P0C7W6 258 aa16.69■□□□□ 0.26
SPIDR-201ENST00000297423 PPARAQ07869 468 aa16.69■□□□□ 0.26
SPIDR-201ENST00000297423 NAA25Q14CX7 972 aa16.69■□□□□ 0.26
SPIDR-201ENST00000297423 WHAMMP3Q1A5X7 153 aa16.69■□□□□ 0.26
SPIDR-201ENST00000297423 CHP1Q99653 195 aa16.69■□□□□ 0.26
SPIDR-201ENST00000297423 PPANQ9NQ55 473 aaKnown RBP16.69■□□□□ 0.26
SPIDR-201ENST00000297423 MAGEC2Q9UBF1 373 aaPredicted RBP16.69■□□□□ 0.26
SPIDR-201ENST00000297423 CYP27A1Q02318 531 aa16.69■□□□□ 0.26
SPIDR-201ENST00000297423 COL15A1P39059 1388 aa16.69■□□□□ 0.26
SPIDR-201ENST00000297423 AFF2P51816 1311 aa16.69■□□□□ 0.26
SPIDR-201ENST00000297423 GUCY2FP51841 1108 aa16.69■□□□□ 0.26
SPIDR-201ENST00000297423 HLTFQ14527 1009 aaKnown RBP eCLIP16.69■□□□□ 0.262e-7■□□□□ 8.5
SPIDR-201ENST00000297423 CD248Q9HCU0 757 aa16.69■□□□□ 0.26
SPIDR-201ENST00000297423 ANKRD18BA2A2Z9 1011 aa16.68■□□□□ 0.26
SPIDR-201ENST00000297423 EYA2O00167 538 aa16.68■□□□□ 0.26
SPIDR-201ENST00000297423 IFT88Q13099 833 aa16.68■□□□□ 0.26
SPIDR-201ENST00000297423 ZNF174Q15697 407 aa16.68■□□□□ 0.26
SPIDR-201ENST00000297423 JAKMIP2Q96AA8 810 aa16.68■□□□□ 0.26
SPIDR-201ENST00000297423 TRIM28Q13263 835 aaKnown RBP16.68■□□□□ 0.26
SPIDR-201ENST00000297423 NLRP10Q86W26 655 aa16.68■□□□□ 0.26
SPIDR-201ENST00000297423 FNBP4Q8N3X1 1017 aaPredicted RBP16.68■□□□□ 0.26
SPIDR-201ENST00000297423 SELENOOQ9BVL4 669 aa16.68■□□□□ 0.26
SPIDR-201ENST00000297423 ERVV-1B6SEH8 477 aa16.68■□□□□ 0.26
SPIDR-201ENST00000297423 BACH1O14867 736 aa16.68■□□□□ 0.26
SPIDR-201ENST00000297423 FOXO4P98177 505 aa16.68■□□□□ 0.26
SPIDR-201ENST00000297423 EXOSC10Q01780 885 aaKnown RBP16.68■□□□□ 0.26
SPIDR-201ENST00000297423 TSGA10IPQ3SY00 556 aa16.68■□□□□ 0.26
SPIDR-201ENST00000297423 CYP26C1Q6V0L0 522 aa16.68■□□□□ 0.26
SPIDR-201ENST00000297423 EPSTI1Q96J88 318 aa16.68■□□□□ 0.26
SPIDR-201ENST00000297423 HELLSQ9NRZ9 838 aa16.68■□□□□ 0.26
SPIDR-201ENST00000297423 NIP7Q9Y221 180 aaKnown RBP eCLIP16.68■□□□□ 0.26
SPIDR-201ENST00000297423 SLIT2O94813 1529 aa16.67■□□□□ 0.26
SPIDR-201ENST00000297423 BMP6P22004 513 aa16.67■□□□□ 0.26
SPIDR-201ENST00000297423 MCM3P25205 808 aa16.67■□□□□ 0.26
SPIDR-201ENST00000297423 PTPROQ16827 1216 aa16.67■□□□□ 0.26
SPIDR-201ENST00000297423 USPL1Q5W0Q7 1092 aa16.67■□□□□ 0.26
SPIDR-201ENST00000297423 LDHAL6AQ6ZMR3 332 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms