RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 DBNLQ9UJU6 430 aaKnown RBP5.32□□□□□ -1.56
CSMD3-201ENST00000297405 MID2Q9UJV3 735 aa5.32□□□□□ -1.56
CSMD3-201ENST00000297405 PI4KAP42356 2102 aa5.32□□□□□ -1.56
CSMD3-201ENST00000297405 CADPSQ9ULU8 1353 aa5.32□□□□□ -1.56
CSMD3-201ENST00000297405 CASKIN1Q8WXD9 1431 aa5.32□□□□□ -1.56
CSMD3-201ENST00000297405 ABCD1P33897 745 aa5.32□□□□□ -1.56
CSMD3-201ENST00000297405 HSPA13P48723 471 aa5.32□□□□□ -1.56
CSMD3-201ENST00000297405 SMTNP53814 917 aa5.32□□□□□ -1.56
CSMD3-201ENST00000297405 PSMC1P62191 440 aaKnown RBP5.32□□□□□ -1.56
CSMD3-201ENST00000297405 CDR2Q01850 454 aa5.32□□□□□ -1.56
CSMD3-201ENST00000297405 SESTD1Q86VW0 696 aa5.32□□□□□ -1.56
CSMD3-201ENST00000297405 CNPY3Q9BT09 278 aa5.32□□□□□ -1.56
CSMD3-201ENST00000297405 RBSNQ9H1K0 784 aa5.32□□□□□ -1.56
CSMD3-201ENST00000297405 BHMT2Q9H2M3 363 aa5.32□□□□□ -1.56
CSMD3-201ENST00000297405 MAGEF1Q9HAY2 307 aa5.32□□□□□ -1.56
CSMD3-201ENST00000297405 TRIM33Q9UPN9 1127 aa5.32□□□□□ -1.56
CSMD3-201ENST00000297405 AP4S1Q9Y587 144 aa5.32□□□□□ -1.56
CSMD3-201ENST00000297405 RALGAPA1Q6GYQ0 2036 aa5.32□□□□□ -1.56
CSMD3-201ENST00000297405 PRIM1P49642 420 aaKnown RBP5.32□□□□□ -1.56
CSMD3-201ENST00000297405 STX1BP61266 288 aa5.32□□□□□ -1.56
CSMD3-201ENST00000297405 NLRP9Q7RTR0 991 aa5.32□□□□□ -1.56
CSMD3-201ENST00000297405 CHMP6Q96FZ7 201 aa5.32□□□□□ -1.56
CSMD3-201ENST00000297405 CATSPER2Q96P56 530 aa5.32□□□□□ -1.56
CSMD3-201ENST00000297405 TSPYL4Q9UJ04 414 aa5.32□□□□□ -1.56
CSMD3-201ENST00000297405 UHRF1BP1LA0JNW5 1464 aa5.32□□□□□ -1.56
CSMD3-201ENST00000297405 SYCE1LA8MT33 242 aa5.32□□□□□ -1.56
CSMD3-201ENST00000297405 STAT6P42226 847 aa5.32□□□□□ -1.56
CSMD3-201ENST00000297405 CNNM4Q6P4Q7 775 aa5.32□□□□□ -1.56
CSMD3-201ENST00000297405 KIAA2013Q8IYS2 634 aa5.32□□□□□ -1.56
CSMD3-201ENST00000297405 TTC1Q99614 292 aa5.32□□□□□ -1.56
CSMD3-201ENST00000297405 AOX1Q06278 1338 aa5.32□□□□□ -1.56
CSMD3-201ENST00000297405 ESYT2A0FGR8 921 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 S100A9P06702 114 aaKnown RBP5.31□□□□□ -1.56
CSMD3-201ENST00000297405 MORC4Q8TE76 937 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 SH3GL2Q99962 352 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 MAK16Q9BXY0 300 aaKnown RBP5.31□□□□□ -1.56
CSMD3-201ENST00000297405 VIPAS39Q9H9C1 493 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 STK26Q9P289 416 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 BRWD1Q9NSI6 2320 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 COPB1P53618 953 aaKnown RBP5.31□□□□□ -1.56
CSMD3-201ENST00000297405 FAM129AQ9BZQ8 928 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 GTF3C1Q12789 2109 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 GOLGA8JA6NMD2 632 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 TXNDC9O14530 226 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 SNAPC5O75971 98 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 ENOX1Q8TC92 643 aaKnown RBP5.31□□□□□ -1.56
CSMD3-201ENST00000297405 HAUS4Q9H6D7 363 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 DNAJC12Q9UKB3 198 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 SLC12A7Q9Y666 1083 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 PHF3Q92576 2039 aaKnown RBP5.31□□□□□ -1.56
CSMD3-201ENST00000297405 ABCA5Q8WWZ7 1642 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 SERPINB1P30740 379 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 KCNJ6P48051 423 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 PSME1Q06323 249 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 SUFUQ9UMX1 484 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 FAM169AQ9Y6X4 670 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 CTNNA1P35221 906 aaKnown RBP5.31□□□□□ -1.56
CSMD3-201ENST00000297405 CCDC15Q0P6D6 951 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 GRM1Q13255 1194 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 RNF207Q6ZRF8 634 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 HS2ST1Q7LGA3 356 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 ANKRD35Q8N283 1001 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 OR9Q1Q8NGQ5 310 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 ZCRB1Q8TBF4 217 aaKnown RBP5.31□□□□□ -1.56
CSMD3-201ENST00000297405 SNAPC4Q5SXM2 1469 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 ZFC3H1O60293 1989 aaKnown RBP5.31□□□□□ -1.56
CSMD3-201ENST00000297405 RBM6P78332 1123 aaKnown RBP5.31□□□□□ -1.56
CSMD3-201ENST00000297405 RAD51AP2Q09MP3 1159 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 MRPL28Q13084 256 aaKnown RBP5.31□□□□□ -1.56
CSMD3-201ENST00000297405 SENP1Q9P0U3 644 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 DYNC1LI1Q9Y6G9 523 aaKnown RBP5.31□□□□□ -1.56
CSMD3-201ENST00000297405 RASSF7Q02833 373 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 ELF2Q15723 593 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 PDZD8Q8NEN9 1154 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 TEKT1Q969V4 418 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 POLR2EP19388 210 aaKnown RBP5.31□□□□□ -1.56
CSMD3-201ENST00000297405 U2AF2P26368 475 aaKnown RBP eCLIP5.31□□□□□ -1.56
CSMD3-201ENST00000297405 BTN2A1Q7KYR7 527 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 HIC2Q96JB3 615 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 GSDMAQ96QA5 445 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 AMOTL2Q9Y2J4 779 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 AHCTF1Q8WYP5 2266 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 TAF11Q15544 211 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 RSBN1LQ6PCB5 846 aaPredicted RBP5.31□□□□□ -1.56
CSMD3-201ENST00000297405 CASP10Q92851 521 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 MTERF3Q96E29 417 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 CAAP1Q9H8G2 361 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 STX10O60499 249 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 CRCPO75575 148 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 RASSF9O75901 435 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 ARHGDIAP52565 204 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 ICA1LQ8NDH6 482 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 MYL1P05976 194 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 CALM1P0DP23 149 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 CALM2P0DP24 149 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 CALM3P0DP25 149 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 NT5C2P49902 561 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 ATN1P54259 1190 aaPredicted RBP5.31□□□□□ -1.56
CSMD3-201ENST00000297405 GUCY1A3Q02108 690 aa5.31□□□□□ -1.56
CSMD3-201ENST00000297405 ZNF569Q5MCW4 686 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms