RNA–Protein interactions for RNA: ENST00000296786.7

UBLCP1-201, Transcript of ubiquitin like domain containing CTD phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBLCP1, Length 2,392 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBLCP1-201ENST00000296786 FOCADQ5VW36 1801 aa10.61□□□□□ -0.71
UBLCP1-201ENST00000296786 KIF2AO00139 706 aaPredicted RBP10.61□□□□□ -0.71
UBLCP1-201ENST00000296786 VEGFAP15692 232 aaPredicted RBP10.61□□□□□ -0.71
UBLCP1-201ENST00000296786 ZNF18P17022 549 aa10.61□□□□□ -0.71
UBLCP1-201ENST00000296786 AFMP43652 599 aa10.61□□□□□ -0.71
UBLCP1-201ENST00000296786 PTGDRQ13258 359 aa10.61□□□□□ -0.71
UBLCP1-201ENST00000296786 NAA30Q147X3 362 aaPredicted RBP10.61□□□□□ -0.71
UBLCP1-201ENST00000296786 PFKFB3Q16875 520 aaPredicted RBP10.61□□□□□ -0.71
UBLCP1-201ENST00000296786 KIF18AQ8NI77 898 aa10.61□□□□□ -0.71
UBLCP1-201ENST00000296786 ENOX1Q8TC92 643 aaKnown RBP10.61□□□□□ -0.71
UBLCP1-201ENST00000296786 MED15Q96RN5 788 aa10.61□□□□□ -0.71
UBLCP1-201ENST00000296786 VWA3AA6NCI4 1184 aa10.6□□□□□ -0.71
UBLCP1-201ENST00000296786 LDHBP07195 334 aaKnown RBP10.6□□□□□ -0.71
UBLCP1-201ENST00000296786 SLFN14P0C7P3 912 aa10.6□□□□□ -0.71
UBLCP1-201ENST00000296786 CDK11BP21127 795 aaKnown RBP10.6□□□□□ -0.71
UBLCP1-201ENST00000296786 RFC4P35249 363 aa10.6□□□□□ -0.71
UBLCP1-201ENST00000296786 USP5P45974 858 aa10.6□□□□□ -0.71
UBLCP1-201ENST00000296786 NLRP5P59047 1200 aa10.6□□□□□ -0.71
UBLCP1-201ENST00000296786 ATP2C1P98194 919 aaPredicted RBP10.6□□□□□ -0.71
UBLCP1-201ENST00000296786 GOLGA8FQ08AF8 430 aa10.6□□□□□ -0.71
UBLCP1-201ENST00000296786 GOLGA8DPQ0D2H9 430 aa10.6□□□□□ -0.71
UBLCP1-201ENST00000296786 NFIXQ14938 502 aa10.6□□□□□ -0.71
UBLCP1-201ENST00000296786 PIK3AP1Q6ZUJ8 805 aa10.6□□□□□ -0.71
UBLCP1-201ENST00000296786 CCDC34Q96HJ3 373 aa10.6□□□□□ -0.71
UBLCP1-201ENST00000296786 BCL11BQ9C0K0 894 aaPredicted RBP10.6□□□□□ -0.71
UBLCP1-201ENST00000296786 MKRN1Q9UHC7 482 aaKnown RBP10.6□□□□□ -0.71
UBLCP1-201ENST00000296786 DDX60LQ5H9U9 1706 aaKnown RBP10.6□□□□□ -0.71
UBLCP1-201ENST00000296786 ADAMTS3O15072 1205 aa10.6□□□□□ -0.71
UBLCP1-201ENST00000296786 CASP1P29466 404 aa10.6□□□□□ -0.71
UBLCP1-201ENST00000296786 PLCD1P51178 756 aa10.6□□□□□ -0.71
UBLCP1-201ENST00000296786 TFAP4Q01664 338 aa10.6□□□□□ -0.71
UBLCP1-201ENST00000296786 GRAPQ13588 217 aa10.6□□□□□ -0.71
UBLCP1-201ENST00000296786 PPP4R3BQ5MIZ7 849 aa10.6□□□□□ -0.71
UBLCP1-201ENST00000296786 C12orf60Q5U649 245 aa10.6□□□□□ -0.71
UBLCP1-201ENST00000296786 SH3RF1Q7Z6J0 888 aa10.6□□□□□ -0.71
UBLCP1-201ENST00000296786 FNBP4Q8N3X1 1017 aaPredicted RBP10.6□□□□□ -0.71
UBLCP1-201ENST00000296786 WDR66Q8TBY9 1149 aa10.6□□□□□ -0.71
UBLCP1-201ENST00000296786 GRAPLQ8TC17 118 aaPredicted RBP10.6□□□□□ -0.71
UBLCP1-201ENST00000296786 SH3RF3Q8TEJ3 882 aaPredicted RBP10.6□□□□□ -0.71
UBLCP1-201ENST00000296786 DYNLL2Q96FJ2 89 aa10.6□□□□□ -0.71
UBLCP1-201ENST00000296786 PAGE5Q96GU1 130 aa10.6□□□□□ -0.71
UBLCP1-201ENST00000296786 TMX1Q9H3N1 280 aa10.6□□□□□ -0.71
UBLCP1-201ENST00000296786 KAT14Q9H8E8 782 aa10.6□□□□□ -0.71
UBLCP1-201ENST00000296786 IL17RBQ9NRM6 502 aa10.6□□□□□ -0.71
UBLCP1-201ENST00000296786 SAMSN1Q9NSI8 373 aaKnown RBP10.6□□□□□ -0.71
UBLCP1-201ENST00000296786 ZBTB22O15209 634 aa10.59□□□□□ -0.71
UBLCP1-201ENST00000296786 KIF5BP33176 963 aa10.59□□□□□ -0.71
UBLCP1-201ENST00000296786 DIXDC1Q155Q3 683 aa10.59□□□□□ -0.71
UBLCP1-201ENST00000296786 PNMA1Q8ND90 353 aa10.59□□□□□ -0.71
UBLCP1-201ENST00000296786 USP21Q9UK80 565 aa10.59□□□□□ -0.71
UBLCP1-201ENST00000296786 ROBO3Q96MS0 1386 aa10.59□□□□□ -0.71
UBLCP1-201ENST00000296786 ERCC5P28715 1186 aaPredicted RBP10.59□□□□□ -0.71
UBLCP1-201ENST00000296786 GRIK5Q16478 980 aa10.59□□□□□ -0.71
UBLCP1-201ENST00000296786 TRAPPC3LQ5T215 181 aa10.59□□□□□ -0.71
UBLCP1-201ENST00000296786 CNBD1Q8NA66 436 aa10.59□□□□□ -0.71
UBLCP1-201ENST00000296786 GPR101Q96P66 508 aaPredicted RBP10.59□□□□□ -0.71
UBLCP1-201ENST00000296786 ZNF215Q9UL58 517 aaPredicted RBP10.59□□□□□ -0.71
UBLCP1-201ENST00000296786 LEMD3Q9Y2U8 911 aa10.59□□□□□ -0.71
UBLCP1-201ENST00000296786 XDHP47989 1333 aa10.58□□□□□ -0.71
UBLCP1-201ENST00000296786 CD44P16070 742 aaKnown RBP10.58□□□□□ -0.72
UBLCP1-201ENST00000296786 MCM7P33993 719 aa10.58□□□□□ -0.72
UBLCP1-201ENST00000296786 TRAPPC10P48553 1259 aa10.58□□□□□ -0.72
UBLCP1-201ENST00000296786 DPYDQ12882 1025 aa10.58□□□□□ -0.72
UBLCP1-201ENST00000296786 TBX2Q13207 712 aaPredicted RBP10.58□□□□□ -0.72
UBLCP1-201ENST00000296786 SYT10Q6XYQ8 523 aa10.58□□□□□ -0.72
UBLCP1-201ENST00000296786 DGKHQ86XP1 1220 aa10.58□□□□□ -0.72
UBLCP1-201ENST00000296786 TMEM139Q8IV31 216 aa10.58□□□□□ -0.72
UBLCP1-201ENST00000296786 STAG2Q8N3U4 1231 aa10.58□□□□□ -0.72
UBLCP1-201ENST00000296786 GPKOWQ92917 476 aaPredicted RBP eCLIP10.58□□□□□ -0.72
UBLCP1-201ENST00000296786 USP17L3A6NCW0 530 aa10.58□□□□□ -0.72
UBLCP1-201ENST00000296786 USP17L4A6NCW7 530 aa10.58□□□□□ -0.72
UBLCP1-201ENST00000296786 CCP110O43303 1012 aa10.58□□□□□ -0.72
UBLCP1-201ENST00000296786 SPECC1LQ69YQ0 1117 aa10.58□□□□□ -0.72
UBLCP1-201ENST00000296786 KLHL10Q6JEL2 608 aa10.58□□□□□ -0.72
UBLCP1-201ENST00000296786 FAM196AQ6ZSG2 479 aa10.58□□□□□ -0.72
UBLCP1-201ENST00000296786 USP17L1Q7RTZ2 530 aa10.58□□□□□ -0.72
UBLCP1-201ENST00000296786 ZNF804AQ7Z570 1209 aa10.58□□□□□ -0.72
UBLCP1-201ENST00000296786 SMYD4Q8IYR2 804 aaPredicted RBP10.58□□□□□ -0.72
UBLCP1-201ENST00000296786 TGFBRAP1Q8WUH2 860 aa10.58□□□□□ -0.72
UBLCP1-201ENST00000296786 STAMQ92783 540 aa10.58□□□□□ -0.72
UBLCP1-201ENST00000296786 GSDMAQ96QA5 445 aa10.58□□□□□ -0.72
UBLCP1-201ENST00000296786 MKNK2Q9HBH9 465 aa10.58□□□□□ -0.72
UBLCP1-201ENST00000296786 FAM205AQ6ZU69 1335 aa10.57□□□□□ -0.72
UBLCP1-201ENST00000296786 SYNRGQ9UMZ2 1314 aa10.57□□□□□ -0.72
UBLCP1-201ENST00000296786 BAG3O95817 575 aa10.57□□□□□ -0.72
UBLCP1-201ENST00000296786 TSPY3P0CV98 308 aa10.57□□□□□ -0.72
UBLCP1-201ENST00000296786 TSPY8P0CW00 308 aa10.57□□□□□ -0.72
UBLCP1-201ENST00000296786 CALML3P27482 149 aa10.57□□□□□ -0.72
UBLCP1-201ENST00000296786 GSTO1P78417 241 aa10.57□□□□□ -0.72
UBLCP1-201ENST00000296786 CUL4BQ13620 913 aa10.57□□□□□ -0.72
UBLCP1-201ENST00000296786 E2F4Q16254 413 aa10.57□□□□□ -0.72
UBLCP1-201ENST00000296786 IL17AQ16552 155 aa10.57□□□□□ -0.72
UBLCP1-201ENST00000296786 HOMER1Q86YM7 354 aa10.57□□□□□ -0.72
UBLCP1-201ENST00000296786 BLIDQ8IZY5 108 aa10.57□□□□□ -0.72
UBLCP1-201ENST00000296786 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.57□□□□□ -0.72
UBLCP1-201ENST00000296786 MAD2L2Q9UI95 211 aa10.57□□□□□ -0.72
UBLCP1-201ENST00000296786 V9GYY5 206 aaPredicted RBP10.57□□□□□ -0.72
UBLCP1-201ENST00000296786 ARHGAP6O43182 974 aa10.57□□□□□ -0.72
UBLCP1-201ENST00000296786 ADKP55263 362 aaKnown RBP10.57□□□□□ -0.72
UBLCP1-201ENST00000296786 STX17P56962 302 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms