RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 STX8Q9UNK0 236 aa13.47□□□□□ -0.25
RHO-201ENST00000296271 DDAH1O94760 285 aa13.47□□□□□ -0.25
RHO-201ENST00000296271 SCG2P13521 617 aa13.47□□□□□ -0.25
RHO-201ENST00000296271 CD44P16070 742 aaKnown RBP13.47□□□□□ -0.25
RHO-201ENST00000296271 BTDP43251 543 aa13.47□□□□□ -0.25
RHO-201ENST00000296271 CFAP100Q494V2 611 aa13.47□□□□□ -0.25
RHO-201ENST00000296271 SBK1Q52WX2 424 aa13.47□□□□□ -0.25
RHO-201ENST00000296271 TTC38Q5R3I4 469 aa13.47□□□□□ -0.25
RHO-201ENST00000296271 KLHL10Q6JEL2 608 aa13.47□□□□□ -0.25
RHO-201ENST00000296271 RTFDC1Q9BY42 306 aaPredicted RBP13.47□□□□□ -0.25
RHO-201ENST00000296271 BLZF1Q9H2G9 400 aa13.47□□□□□ -0.25
RHO-201ENST00000296271 LY75O60449 1722 aa13.46□□□□□ -0.25
RHO-201ENST00000296271 E4F1Q66K89 784 aaPredicted RBP13.46□□□□□ -0.25
RHO-201ENST00000296271 CLEC10AQ8IUN9 316 aa13.46□□□□□ -0.25
RHO-201ENST00000296271 KAT14Q9H8E8 782 aa13.46□□□□□ -0.25
RHO-201ENST00000296271 RBM28Q9NW13 759 aaKnown RBP13.46□□□□□ -0.25
RHO-201ENST00000296271 SMTNL1A8MU46 457 aa13.46□□□□□ -0.26
RHO-201ENST00000296271 IKBKBO14920 756 aa13.46□□□□□ -0.26
RHO-201ENST00000296271 SARSP49591 514 aaKnown RBP13.46□□□□□ -0.26
RHO-201ENST00000296271 OSBPL5Q9H0X9 879 aaPredicted RBP13.46□□□□□ -0.26
RHO-201ENST00000296271 NFE2L3Q9Y4A8 694 aa13.46□□□□□ -0.26
RHO-201ENST00000296271 LAMB1P07942 1786 aa13.45□□□□□ -0.26
RHO-201ENST00000296271 DLEC1Q9Y238 1755 aa13.45□□□□□ -0.26
RHO-201ENST00000296271 RRP9O43818 475 aaKnown RBP13.45□□□□□ -0.26
RHO-201ENST00000296271 XBP1P17861 261 aa13.45□□□□□ -0.26
RHO-201ENST00000296271 PROM2Q8N271 834 aa13.45□□□□□ -0.26
RHO-201ENST00000296271 WDR66Q8TBY9 1149 aa13.45□□□□□ -0.26
RHO-201ENST00000296271 SMARCE1Q969G3 411 aa13.45□□□□□ -0.26
RHO-201ENST00000296271 MAD2L2Q9UI95 211 aa13.45□□□□□ -0.26
RHO-201ENST00000296271 LEMD3Q9Y2U8 911 aa13.45□□□□□ -0.26
RHO-201ENST00000296271 PDS5AQ29RF7 1337 aaKnown RBP13.45□□□□□ -0.26
RHO-201ENST00000296271 PP2D1A8MPX8 630 aa13.45□□□□□ -0.26
RHO-201ENST00000296271 C6orf229H3BNL8 230 aa13.45□□□□□ -0.26
RHO-201ENST00000296271 TSPY3P0CV98 308 aa13.45□□□□□ -0.26
RHO-201ENST00000296271 TSPY8P0CW00 308 aa13.45□□□□□ -0.26
RHO-201ENST00000296271 RASA1P20936 1047 aa13.45□□□□□ -0.26
RHO-201ENST00000296271 DPYDQ12882 1025 aa13.45□□□□□ -0.26
RHO-201ENST00000296271 MORC3Q14149 939 aa13.45□□□□□ -0.26
RHO-201ENST00000296271 PFKFB3Q16875 520 aaPredicted RBP13.45□□□□□ -0.26
RHO-201ENST00000296271 SPTY2D1Q68D10 685 aaPredicted RBP13.45□□□□□ -0.26
RHO-201ENST00000296271 CCAR2Q8N163 923 aaKnown RBP13.45□□□□□ -0.26
RHO-201ENST00000296271 PLIN2Q99541 437 aa13.45□□□□□ -0.26
RHO-201ENST00000296271 MTRQ99707 1265 aa13.45□□□□□ -0.26
RHO-201ENST00000296271 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.45□□□□□ -0.26
RHO-201ENST00000296271 V9GYY5 206 aaPredicted RBP13.45□□□□□ -0.26
RHO-201ENST00000296271 CALM1P0DP23 149 aa13.44□□□□□ -0.26
RHO-201ENST00000296271 CALM2P0DP24 149 aa13.44□□□□□ -0.26
RHO-201ENST00000296271 CALM3P0DP25 149 aa13.44□□□□□ -0.26
RHO-201ENST00000296271 MFSD14BQ5SR56 506 aa13.44□□□□□ -0.26
RHO-201ENST00000296271 ZNF804AQ7Z570 1209 aa13.44□□□□□ -0.26
RHO-201ENST00000296271 PAGE5Q96GU1 130 aa13.44□□□□□ -0.26
RHO-201ENST00000296271 TMEM47Q9BQJ4 181 aa13.44□□□□□ -0.26
RHO-201ENST00000296271 VAT1LQ9HCJ6 419 aa13.44□□□□□ -0.26
RHO-201ENST00000296271 RGL2O15211 777 aa13.43□□□□□ -0.26
RHO-201ENST00000296271 GTF2F1P35269 517 aaKnown RBP eCLIP13.43□□□□□ -0.26
RHO-201ENST00000296271 PICALMQ13492 652 aa13.43□□□□□ -0.26
RHO-201ENST00000296271 PPP2R5BQ15173 497 aa13.43□□□□□ -0.26
RHO-201ENST00000296271 CRY2Q49AN0 593 aa13.43□□□□□ -0.26
RHO-201ENST00000296271 CEP135Q66GS9 1140 aa13.43□□□□□ -0.26
RHO-201ENST00000296271 WWC2Q6AWC2 1192 aa13.43□□□□□ -0.26
RHO-201ENST00000296271 USP17L2Q6R6M4 530 aa13.43□□□□□ -0.26
RHO-201ENST00000296271 HEATR3Q7Z4Q2 680 aa13.43□□□□□ -0.26
RHO-201ENST00000296271 HOMER1Q86YM7 354 aa13.43□□□□□ -0.26
RHO-201ENST00000296271 ZNF579Q8NAF0 562 aaKnown RBP13.43□□□□□ -0.26
RHO-201ENST00000296271 TBC1D16Q8TBP0 767 aa13.43□□□□□ -0.26
RHO-201ENST00000296271 GGA1Q9UJY5 639 aa13.43□□□□□ -0.26
RHO-201ENST00000296271 SFPQP23246 707 aaKnown RBP eCLIP13.43□□□□□ -0.26
RHO-201ENST00000296271 EIF6P56537 245 aaKnown RBP13.43□□□□□ -0.26
RHO-201ENST00000296271 GTF2IP78347 998 aa13.43□□□□□ -0.26
RHO-201ENST00000296271 NYAP1Q6ZVC0 841 aa13.43□□□□□ -0.26
RHO-201ENST00000296271 TEX11Q8IYF3 940 aa13.43□□□□□ -0.26
RHO-201ENST00000296271 TMEM60Q9H2L4 133 aa13.43□□□□□ -0.26
RHO-201ENST00000296271 CEP131Q9UPN4 1083 aa13.43□□□□□ -0.26
RHO-201ENST00000296271 MAPK8IP1Q9UQF2 711 aa13.43□□□□□ -0.26
RHO-201ENST00000296271 PCP11498 1178 aaKnown RBP13.42□□□□□ -0.26
RHO-201ENST00000296271 CDK8P49336 464 aa13.42□□□□□ -0.26
RHO-201ENST00000296271 TPM4P67936 248 aa13.42□□□□□ -0.26
RHO-201ENST00000296271 NT5DC1Q5TFE4 455 aa13.42□□□□□ -0.26
RHO-201ENST00000296271 ZNF444Q8N0Y2 327 aaPredicted RBP13.42□□□□□ -0.26
RHO-201ENST00000296271 QTRT2Q9H974 415 aaKnown RBP13.42□□□□□ -0.26
RHO-201ENST00000296271 TEX33O43247 280 aa13.42□□□□□ -0.26
RHO-201ENST00000296271 ADKP55263 362 aaKnown RBP13.42□□□□□ -0.26
RHO-201ENST00000296271 RHBDL3P58872 404 aa13.42□□□□□ -0.26
RHO-201ENST00000296271 ATP2C1P98194 919 aaPredicted RBP13.42□□□□□ -0.26
RHO-201ENST00000296271 PTPN14Q15678 1187 aa13.42□□□□□ -0.26
RHO-201ENST00000296271 INF2Q27J81 1249 aa13.42□□□□□ -0.26
RHO-201ENST00000296271 UBA5Q9GZZ9 404 aa13.42□□□□□ -0.26
RHO-201ENST00000296271 UBR3Q6ZT12 1888 aa13.42□□□□□ -0.26
RHO-201ENST00000296271 FLT1P17948 1338 aa13.42□□□□□ -0.26
RHO-201ENST00000296271 SPATA31A6Q5VVP1 1343 aa13.42□□□□□ -0.26
RHO-201ENST00000296271 POLRMTO00411 1230 aaKnown RBP13.41□□□□□ -0.26
RHO-201ENST00000296271 BAG3O95817 575 aa13.41□□□□□ -0.26
RHO-201ENST00000296271 CUL4BQ13620 913 aa13.41□□□□□ -0.26
RHO-201ENST00000296271 DOK7Q18PE1 504 aa13.41□□□□□ -0.26
RHO-201ENST00000296271 VSTM4Q8IW00 320 aa13.41□□□□□ -0.26
RHO-201ENST00000296271 BLIDQ8IZY5 108 aa13.41□□□□□ -0.26
RHO-201ENST00000296271 LRRN4CLQ8ND94 238 aa13.41□□□□□ -0.26
RHO-201ENST00000296271 SPATA20Q8TB22 786 aa13.41□□□□□ -0.26
RHO-201ENST00000296271 LRRC15Q8TF66 581 aa13.41□□□□□ -0.26
RHO-201ENST00000296271 PPP1R13BQ96KQ4 1090 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms