RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 PI4KBQ9UBF8 816 aa19.76■□□□□ 0.75
CDC42EP3-201ENST00000295324 COL15A1P39059 1388 aa19.76■□□□□ 0.75
CDC42EP3-201ENST00000295324 ADD2P35612 726 aa19.76■□□□□ 0.75
CDC42EP3-201ENST00000295324 CCDC50Q8IVM0 306 aa19.76■□□□□ 0.75
CDC42EP3-201ENST00000295324 DEPTORQ8TB45 409 aa19.76■□□□□ 0.75
CDC42EP3-201ENST00000295324 LEO1Q8WVC0 666 aaPredicted RBP19.76■□□□□ 0.75
CDC42EP3-201ENST00000295324 MRPL44Q9H9J2 332 aaKnown RBP19.76■□□□□ 0.75
CDC42EP3-201ENST00000295324 CLTCL1P53675 1640 aa19.75■□□□□ 0.75
CDC42EP3-201ENST00000295324 ATP2A1O14983 1001 aa19.75■□□□□ 0.75
CDC42EP3-201ENST00000295324 RRP9O43818 475 aaKnown RBP19.75■□□□□ 0.75
CDC42EP3-201ENST00000295324 IREB2P48200 963 aaKnown RBP19.75■□□□□ 0.75
CDC42EP3-201ENST00000295324 PAK1Q13153 545 aa19.75■□□□□ 0.75
CDC42EP3-201ENST00000295324 DPP9Q86TI2 863 aa19.75■□□□□ 0.75
CDC42EP3-201ENST00000295324 PLCD3Q8N3E9 789 aa19.75■□□□□ 0.75
CDC42EP3-201ENST00000295324 INCENPQ9NQS7 918 aa19.75■□□□□ 0.75
CDC42EP3-201ENST00000295324 PAXBP1Q9Y5B6 917 aa19.75■□□□□ 0.75
CDC42EP3-201ENST00000295324 PFKFB2O60825 505 aa19.75■□□□□ 0.75
CDC42EP3-201ENST00000295324 NEK8Q86SG6 692 aa19.75■□□□□ 0.75
CDC42EP3-201ENST00000295324 PSMD1Q99460 953 aa19.75■□□□□ 0.75
CDC42EP3-201ENST00000295324 PCDHA12Q9UN75 941 aa19.75■□□□□ 0.75
CDC42EP3-201ENST00000295324 GCNT3O95395 438 aa19.75■□□□□ 0.75
CDC42EP3-201ENST00000295324 GOLGA1Q92805 767 aa19.75■□□□□ 0.75
CDC42EP3-201ENST00000295324 ADD1P35611 737 aaKnown RBP19.75■□□□□ 0.75
CDC42EP3-201ENST00000295324 CTAGE15A4D2H0 777 aa19.75■□□□□ 0.75
CDC42EP3-201ENST00000295324 ZNF202O95125 648 aa19.75■□□□□ 0.75
CDC42EP3-201ENST00000295324 CTAGE8P0CG41 777 aa19.75■□□□□ 0.75
CDC42EP3-201ENST00000295324 HLFQ16534 295 aa19.75■□□□□ 0.75
CDC42EP3-201ENST00000295324 ME3Q16798 604 aa19.75■□□□□ 0.75
CDC42EP3-201ENST00000295324 CTAGE6Q86UF2 777 aa19.75■□□□□ 0.75
CDC42EP3-201ENST00000295324 NOSTRINQ8IVI9 506 aa19.75■□□□□ 0.75
CDC42EP3-201ENST00000295324 CTAGE4Q8IX94 777 aa19.75■□□□□ 0.75
CDC42EP3-201ENST00000295324 UIMC1Q96RL1 719 aa19.75■□□□□ 0.75
CDC42EP3-201ENST00000295324 ZSWIM6Q9HCJ5 1215 aa19.75■□□□□ 0.75
CDC42EP3-201ENST00000295324 MYSM1Q5VVJ2 828 aa19.74■□□□□ 0.75
CDC42EP3-201ENST00000295324 TLR7Q9NYK1 1049 aaKnown RBP19.74■□□□□ 0.75
CDC42EP3-201ENST00000295324 MAPK8IP1Q9UQF2 711 aa19.74■□□□□ 0.75
CDC42EP3-201ENST00000295324 CARMIL3Q8ND23 1372 aa19.74■□□□□ 0.75
CDC42EP3-201ENST00000295324 CPSF1Q10570 1443 aaKnown RBP19.74■□□□□ 0.75
CDC42EP3-201ENST00000295324 DYNLL1P63167 89 aaKnown RBP19.74■□□□□ 0.75
CDC42EP3-201ENST00000295324 TRIM14Q14142 442 aa19.74■□□□□ 0.75
CDC42EP3-201ENST00000295324 GSTA5Q7RTV2 222 aa19.74■□□□□ 0.75
CDC42EP3-201ENST00000295324 ZBTB8OSQ8IWT0 167 aa19.74■□□□□ 0.75
CDC42EP3-201ENST00000295324 USP31Q70CQ4 1352 aa19.74■□□□□ 0.75
CDC42EP3-201ENST00000295324 TNFAIP3P21580 790 aa19.73■□□□□ 0.75
CDC42EP3-201ENST00000295324 ZSWIM4Q9H7M6 989 aa19.73■□□□□ 0.75
CDC42EP3-201ENST00000295324 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.73■□□□□ 0.75
CDC42EP3-201ENST00000295324 C1orf167Q5SNV9 1468 aa19.73■□□□□ 0.75
CDC42EP3-201ENST00000295324 ERICH4A6NGS2 130 aa19.73■□□□□ 0.75
CDC42EP3-201ENST00000295324 VPS72Q15906 364 aa19.73■□□□□ 0.75
CDC42EP3-201ENST00000295324 PLA2G4DQ86XP0 818 aa19.73■□□□□ 0.75
CDC42EP3-201ENST00000295324 TEKT3Q9BXF9 490 aa19.73■□□□□ 0.75
CDC42EP3-201ENST00000295324 USP17L8P0C7I0 530 aa19.73■□□□□ 0.75
CDC42EP3-201ENST00000295324 SPOUT1Q5T280 376 aaKnown RBP19.73■□□□□ 0.75
CDC42EP3-201ENST00000295324 CMTR1Q8N1G2 835 aaKnown RBP19.73■□□□□ 0.75
CDC42EP3-201ENST00000295324 MYO3BQ8WXR4 1341 aa19.73■□□□□ 0.75
CDC42EP3-201ENST00000295324 FOXP4Q8IVH2 680 aaPredicted RBP19.73■□□□□ 0.75
CDC42EP3-201ENST00000295324 MAP4K1Q92918 833 aa19.73■□□□□ 0.75
CDC42EP3-201ENST00000295324 DNAI1Q9UI46 699 aa19.73■□□□□ 0.75
CDC42EP3-201ENST00000295324 CDC37L1Q7L3B6 337 aa19.73■□□□□ 0.75
CDC42EP3-201ENST00000295324 METTL13Q8N6R0 699 aa19.73■□□□□ 0.75
CDC42EP3-201ENST00000295324 ARHGEF1Q92888 912 aaKnown RBP19.73■□□□□ 0.75
CDC42EP3-201ENST00000295324 OSBPL3Q9H4L5 887 aa19.73■□□□□ 0.75
CDC42EP3-201ENST00000295324 H0YCG3 227 aa19.72■□□□□ 0.75
CDC42EP3-201ENST00000295324 ZBTB7AO95365 584 aa19.72■□□□□ 0.75
CDC42EP3-201ENST00000295324 CYP19A1P11511 503 aaPredicted RBP19.72■□□□□ 0.75
CDC42EP3-201ENST00000295324 MAATS1Q7Z4T9 603 aa19.72■□□□□ 0.75
CDC42EP3-201ENST00000295324 CLSTN2Q9H4D0 955 aa19.72■□□□□ 0.75
CDC42EP3-201ENST00000295324 RAD51AP2Q09MP3 1159 aa19.72■□□□□ 0.75
CDC42EP3-201ENST00000295324 CCDC155Q8N6L0 562 aa19.72■□□□□ 0.75
CDC42EP3-201ENST00000295324 CCDC77Q9BR77 488 aa19.72■□□□□ 0.75
CDC42EP3-201ENST00000295324 ADD3Q9UEY8 706 aaKnown RBP19.72■□□□□ 0.75
CDC42EP3-201ENST00000295324 PALD1Q9ULE6 856 aa19.72■□□□□ 0.75
CDC42EP3-201ENST00000295324 SYNRGQ9UMZ2 1314 aa19.72■□□□□ 0.75
CDC42EP3-201ENST00000295324 INF2Q27J81 1249 aa19.72■□□□□ 0.75
CDC42EP3-201ENST00000295324 CTAGE9A4FU28 777 aa19.72■□□□□ 0.75
CDC42EP3-201ENST00000295324 SPICE1Q8N0Z3 855 aa19.72■□□□□ 0.75
CDC42EP3-201ENST00000295324 PCDHB13Q9Y5F0 798 aa19.72■□□□□ 0.75
CDC42EP3-201ENST00000295324 ADCY9O60503 1353 aa19.72■□□□□ 0.75
CDC42EP3-201ENST00000295324 POSTNQ15063 836 aa19.71■□□□□ 0.75
CDC42EP3-201ENST00000295324 VPS16Q9H269 839 aa19.71■□□□□ 0.75
CDC42EP3-201ENST00000295324 SHTN1A0MZ66 631 aa19.71■□□□□ 0.75
CDC42EP3-201ENST00000295324 NRBP2Q9NSY0 501 aa19.71■□□□□ 0.75
CDC42EP3-201ENST00000295324 AKR1B15C9JRZ8 316 aaPredicted RBP19.71■□□□□ 0.75
CDC42EP3-201ENST00000295324 TMED8Q6PL24 325 aaPredicted RBP19.71■□□□□ 0.75
CDC42EP3-201ENST00000295324 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.71■□□□□ 0.75
CDC42EP3-201ENST00000295324 OR52Z1P0C646 297 aa19.71■□□□□ 0.75
CDC42EP3-201ENST00000295324 TMOD1P28289 359 aa19.71■□□□□ 0.75
CDC42EP3-201ENST00000295324 NT5C2P49902 561 aa19.71■□□□□ 0.75
CDC42EP3-201ENST00000295324 LIN9Q5TKA1 542 aa19.71■□□□□ 0.75
CDC42EP3-201ENST00000295324 PODNQ7Z5L7 613 aa19.71■□□□□ 0.75
CDC42EP3-201ENST00000295324 OTUD6BQ8N6M0 293 aa19.71■□□□□ 0.75
CDC42EP3-201ENST00000295324 CGNQ9P2M7 1197 aaKnown RBP19.71■□□□□ 0.75
CDC42EP3-201ENST00000295324 TBC1D7Q9P0N9 293 aa19.71■□□□□ 0.75
CDC42EP3-201ENST00000295324 GLI2P10070 1586 aa19.7■□□□□ 0.74
CDC42EP3-201ENST00000295324 BMP3P12645 472 aa19.7■□□□□ 0.74
CDC42EP3-201ENST00000295324 POLA2Q14181 598 aa19.7■□□□□ 0.74
CDC42EP3-201ENST00000295324 XKR9Q5GH70 373 aa19.7■□□□□ 0.74
CDC42EP3-201ENST00000295324 ABT1Q9ULW3 272 aaKnown RBP19.7■□□□□ 0.74
CDC42EP3-201ENST00000295324 GDF11O95390 407 aa19.7■□□□□ 0.74
CDC42EP3-201ENST00000295324 HSPA1LP34931 641 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms