RNA–Protein interactions for RNA: ENST00000290541.6

PSMB4-201, Transcript of proteasome subunit beta 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMB4, Length 964 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-201ENST00000290541 SIPA1L1O43166 1804 aa15.91■□□□□ 0.14
PSMB4-201ENST00000290541 ATRNL1Q5VV63 1379 aa15.9■□□□□ 0.14
PSMB4-201ENST00000290541 WDFY4Q6ZS81 3184 aa15.9■□□□□ 0.14
PSMB4-201ENST00000290541 FAM196BA6NMK8 535 aa15.9■□□□□ 0.14
PSMB4-201ENST00000290541 SGSM2O43147 1006 aa15.9■□□□□ 0.14
PSMB4-201ENST00000290541 APPP05067 770 aa15.9■□□□□ 0.14
PSMB4-201ENST00000290541 HSPD1P10809 573 aaKnown RBP15.9■□□□□ 0.14
PSMB4-201ENST00000290541 PLCD1P51178 756 aa15.9■□□□□ 0.14
PSMB4-201ENST00000290541 GRIN2CQ14957 1233 aa15.9■□□□□ 0.14
PSMB4-201ENST00000290541 IFNL3Q8IZI9 196 aa15.9■□□□□ 0.14
PSMB4-201ENST00000290541 LBHD1Q9BQE6 289 aaPredicted RBP15.9■□□□□ 0.14
PSMB4-201ENST00000290541 ESYT1Q9BSJ8 1104 aa15.9■□□□□ 0.14
PSMB4-201ENST00000290541 EPHX3Q9H6B9 360 aa15.9■□□□□ 0.14
PSMB4-201ENST00000290541 ATP8A2Q9NTI2 1148 aa15.9■□□□□ 0.14
PSMB4-201ENST00000290541 MCM9Q9NXL9 1143 aa15.9■□□□□ 0.14
PSMB4-201ENST00000290541 FRMPD3Q5JV73 1810 aa15.89■□□□□ 0.13
PSMB4-201ENST00000290541 RPAP1Q9BWH6 1393 aaPredicted RBP15.89■□□□□ 0.13
PSMB4-201ENST00000290541 USP17L12C9JPN9 530 aa15.89■□□□□ 0.13
PSMB4-201ENST00000290541 USP17L21D6R901 530 aa15.89■□□□□ 0.13
PSMB4-201ENST00000290541 GNAT2P19087 354 aa15.89■□□□□ 0.13
PSMB4-201ENST00000290541 MRPS5P82675 430 aaKnown RBP15.89■□□□□ 0.13
PSMB4-201ENST00000290541 CTR9Q6PD62 1173 aa15.89■□□□□ 0.13
PSMB4-201ENST00000290541 POLR3DP05423 398 aaPredicted RBP15.88■□□□□ 0.13
PSMB4-201ENST00000290541 PTH1RQ03431 593 aa15.88■□□□□ 0.13
PSMB4-201ENST00000290541 TMEM31Q5JXX7 168 aa15.88■□□□□ 0.13
PSMB4-201ENST00000290541 PARK7Q99497 189 aaKnown RBP15.88■□□□□ 0.13
PSMB4-201ENST00000290541 CHD9Q3L8U1 2897 aa15.87■□□□□ 0.13
PSMB4-201ENST00000290541 TNPO2O14787 897 aaKnown RBP15.87■□□□□ 0.13
PSMB4-201ENST00000290541 FGAP02671 866 aa15.87■□□□□ 0.13
PSMB4-201ENST00000290541 CYP2C8P10632 490 aa15.87■□□□□ 0.13
PSMB4-201ENST00000290541 RRP1BQ14684 758 aaKnown RBP15.87■□□□□ 0.13
PSMB4-201ENST00000290541 C12orf60Q5U649 245 aa15.87■□□□□ 0.13
PSMB4-201ENST00000290541 GIMAP6Q6P9H5 292 aa15.87■□□□□ 0.13
PSMB4-201ENST00000290541 RUFY2Q8WXA3 655 aa15.87■□□□□ 0.13
PSMB4-201ENST00000290541 ZKSCAN4Q969J2 545 aaPredicted RBP15.87■□□□□ 0.13
PSMB4-201ENST00000290541 DYNLL2Q96FJ2 89 aa15.87■□□□□ 0.13
PSMB4-201ENST00000290541 DHX36Q9H2U1 1008 aaKnown RBP15.87■□□□□ 0.13
PSMB4-201ENST00000290541 DNAJC18Q9H819 358 aa15.87■□□□□ 0.13
PSMB4-201ENST00000290541 C11orf16Q9NQ32 467 aa15.87■□□□□ 0.13
PSMB4-201ENST00000290541 RAD50Q92878 1312 aa15.87■□□□□ 0.13
PSMB4-201ENST00000290541 USP34Q70CQ2 3546 aa15.86■□□□□ 0.13
PSMB4-201ENST00000290541 MINDY4BA8MYZ0 360 aa15.86■□□□□ 0.13
PSMB4-201ENST00000290541 HMGCRP04035 888 aa15.86■□□□□ 0.13
PSMB4-201ENST00000290541 TDO2P48775 406 aa15.86■□□□□ 0.13
PSMB4-201ENST00000290541 MAP3K10Q02779 954 aa15.86■□□□□ 0.13
PSMB4-201ENST00000290541 TRIM32Q13049 653 aa15.86■□□□□ 0.13
PSMB4-201ENST00000290541 ALX1Q15699 326 aa15.86■□□□□ 0.13
PSMB4-201ENST00000290541 STK11IPQ8N1F8 1099 aa15.86■□□□□ 0.13
PSMB4-201ENST00000290541 SLC44A5Q8NCS7 719 aa15.86■□□□□ 0.13
PSMB4-201ENST00000290541 LSG1Q9H089 658 aaKnown RBP15.86■□□□□ 0.13
PSMB4-201ENST00000290541 HMX1Q9NP08 348 aaPredicted RBP15.86■□□□□ 0.13
PSMB4-201ENST00000290541 PI4KBQ9UBF8 816 aa15.86■□□□□ 0.13
PSMB4-201ENST00000290541 TAOK2Q9UL54 1235 aa15.86■□□□□ 0.13
PSMB4-201ENST00000290541 KCNH4Q9UQ05 1017 aa15.86■□□□□ 0.13
PSMB4-201ENST00000290541 TACC3Q9Y6A5 838 aa15.86■□□□□ 0.13
PSMB4-201ENST00000290541 PLXNB2O15031 1838 aa15.86■□□□□ 0.13
PSMB4-201ENST00000290541 MFAP1P55081 439 aaKnown RBP15.85■□□□□ 0.13
PSMB4-201ENST00000290541 PPATQ06203 517 aa15.85■□□□□ 0.13
PSMB4-201ENST00000290541 GABPAQ06546 454 aa15.85■□□□□ 0.13
PSMB4-201ENST00000290541 SHROOM1Q2M3G4 852 aaPredicted RBP15.85■□□□□ 0.13
PSMB4-201ENST00000290541 SBK1Q52WX2 424 aa15.85■□□□□ 0.13
PSMB4-201ENST00000290541 TTC6Q86TZ1 520 aa15.85■□□□□ 0.13
PSMB4-201ENST00000290541 METTL16Q86W50 562 aaKnown RBP15.85■□□□□ 0.13
PSMB4-201ENST00000290541 WRNIP1Q96S55 665 aa15.85■□□□□ 0.13
PSMB4-201ENST00000290541 NAPBQ9H115 298 aa15.85■□□□□ 0.13
PSMB4-201ENST00000290541 PHF20L1A8MW92 1017 aa15.84■□□□□ 0.13
PSMB4-201ENST00000290541 TBC1D12O60347 775 aa15.84■□□□□ 0.13
PSMB4-201ENST00000290541 HLA-DOAP06340 250 aa15.84■□□□□ 0.13
PSMB4-201ENST00000290541 INPP5BP32019 993 aa15.84■□□□□ 0.13
PSMB4-201ENST00000290541 CTDSPL2Q05D32 466 aa15.84■□□□□ 0.13
PSMB4-201ENST00000290541 GPAT2Q6NUI2 795 aa15.84■□□□□ 0.13
PSMB4-201ENST00000290541 POTEEQ6S8J3 1075 aa15.84■□□□□ 0.13
PSMB4-201ENST00000290541 FOXP4Q8IVH2 680 aaPredicted RBP15.84■□□□□ 0.13
PSMB4-201ENST00000290541 DSCC1Q9BVC3 393 aa15.84■□□□□ 0.13
PSMB4-201ENST00000290541 NACAP1Q9BZK3 213 aa15.84■□□□□ 0.13
PSMB4-201ENST00000290541 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.84■□□□□ 0.13
PSMB4-201ENST00000290541 INCENPQ9NQS7 918 aa15.84■□□□□ 0.13
PSMB4-201ENST00000290541 CFAP54Q96N23 3096 aa15.83■□□□□ 0.13
PSMB4-201ENST00000290541 SHMT1P34896 483 aa15.83■□□□□ 0.12
PSMB4-201ENST00000290541 HAND2P61296 217 aa15.83■□□□□ 0.12
PSMB4-201ENST00000290541 JAG1P78504 1218 aa15.83■□□□□ 0.12
PSMB4-201ENST00000290541 DCAF15Q66K64 600 aa15.83■□□□□ 0.12
PSMB4-201ENST00000290541 PPM1EQ8WY54 764 aa15.83■□□□□ 0.12
PSMB4-201ENST00000290541 DDRGK1Q96HY6 314 aa15.83■□□□□ 0.12
PSMB4-201ENST00000290541 ZNF341Q9BYN7 854 aa15.83■□□□□ 0.12
PSMB4-201ENST00000290541 EHD4Q9H223 541 aa15.83■□□□□ 0.12
PSMB4-201ENST00000290541 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.83■□□□□ 0.12
PSMB4-201ENST00000290541 ARPP21Q9UBL0 812 aaPredicted RBP15.83■□□□□ 0.12
PSMB4-201ENST00000290541 SERPINB13Q9UIV8 391 aa15.83■□□□□ 0.12
PSMB4-201ENST00000290541 ZNF112Q9UJU3 913 aa15.83■□□□□ 0.12
PSMB4-201ENST00000290541 PTPRFP10586 1907 aa15.83■□□□□ 0.12
PSMB4-201ENST00000290541 GPR37L1O60883 481 aa15.82■□□□□ 0.12
PSMB4-201ENST00000290541 BMP1P13497 986 aa15.82■□□□□ 0.12
PSMB4-201ENST00000290541 PPARAQ07869 468 aa15.82■□□□□ 0.12
PSMB4-201ENST00000290541 AKNAD1Q5T1N1 836 aa15.82■□□□□ 0.12
PSMB4-201ENST00000290541 CASC1Q6TDU7 716 aa15.82■□□□□ 0.12
PSMB4-201ENST00000290541 CRACR2BQ8N4Y2 399 aaPredicted RBP15.82■□□□□ 0.12
PSMB4-201ENST00000290541 IL27Q8NEV9 243 aa15.82■□□□□ 0.12
PSMB4-201ENST00000290541 MAP4K1Q92918 833 aa15.82■□□□□ 0.12
PSMB4-201ENST00000290541 ANO2Q9NQ90 1003 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms