RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 MAP3K11Q16584 847 aa10.32□□□□□ -0.76
CCDC144B-201ENST00000285176 KLHL40Q2TBA0 621 aa10.32□□□□□ -0.76
CCDC144B-201ENST00000285176 ANGEL2Q5VTE6 544 aaKnown RBP10.32□□□□□ -0.76
CCDC144B-201ENST00000285176 SLFN13Q68D06 897 aa10.32□□□□□ -0.76
CCDC144B-201ENST00000285176 NBPF11Q86T75 865 aa10.32□□□□□ -0.76
CCDC144B-201ENST00000285176 MAPK8IP1Q9UQF2 711 aa10.32□□□□□ -0.76
CCDC144B-201ENST00000285176 TACC3Q9Y6A5 838 aa10.32□□□□□ -0.76
CCDC144B-201ENST00000285176 PDIA4P13667 645 aaKnown RBP10.32□□□□□ -0.76
CCDC144B-201ENST00000285176 KRT2P35908 639 aa10.32□□□□□ -0.76
CCDC144B-201ENST00000285176 MYSM1Q5VVJ2 828 aa10.32□□□□□ -0.76
CCDC144B-201ENST00000285176 NSMFQ6X4W1 530 aa10.32□□□□□ -0.76
CCDC144B-201ENST00000285176 FILIP1Q7Z7B0 1213 aa10.32□□□□□ -0.76
CCDC144B-201ENST00000285176 CNNM3Q8NE01 707 aa10.32□□□□□ -0.76
CCDC144B-201ENST00000285176 SLC16A10Q8TF71 515 aa10.32□□□□□ -0.76
CCDC144B-201ENST00000285176 OSBPL5Q9H0X9 879 aaPredicted RBP10.32□□□□□ -0.76
CCDC144B-201ENST00000285176 ZSCAN16Q9H4T2 348 aaPredicted RBP10.32□□□□□ -0.76
CCDC144B-201ENST00000285176 NR1I2O75469 434 aa10.32□□□□□ -0.76
CCDC144B-201ENST00000285176 EEF2P13639 858 aaKnown RBP10.32□□□□□ -0.76
CCDC144B-201ENST00000285176 TNIP1Q15025 636 aa10.32□□□□□ -0.76
CCDC144B-201ENST00000285176 UBE2SQ16763 222 aa10.32□□□□□ -0.76
CCDC144B-201ENST00000285176 RSBN1LQ6PCB5 846 aaPredicted RBP10.32□□□□□ -0.76
CCDC144B-201ENST00000285176 PCNTO95613 3336 aa10.32□□□□□ -0.76
CCDC144B-201ENST00000285176 KIF28PB7ZC32 967 aa10.32□□□□□ -0.76
CCDC144B-201ENST00000285176 DDX39AO00148 427 aaKnown RBP10.32□□□□□ -0.76
CCDC144B-201ENST00000285176 CHMP2AO43633 222 aa10.32□□□□□ -0.76
CCDC144B-201ENST00000285176 SERPINC1P01008 464 aa10.32□□□□□ -0.76
CCDC144B-201ENST00000285176 RASA1P20936 1047 aa10.32□□□□□ -0.76
CCDC144B-201ENST00000285176 HOXA13P31271 388 aaPredicted RBP10.32□□□□□ -0.76
CCDC144B-201ENST00000285176 TXLNAP40222 546 aa10.32□□□□□ -0.76
CCDC144B-201ENST00000285176 DGKZQ13574 1117 aa10.32□□□□□ -0.76
CCDC144B-201ENST00000285176 DPY19L2Q6NUT2 758 aa10.32□□□□□ -0.76
CCDC144B-201ENST00000285176 BMP2KQ9NSY1 1161 aaPredicted RBP10.32□□□□□ -0.76
CCDC144B-201ENST00000285176 GPR75-ASB3A0A0A6YYF3 556 aa10.31□□□□□ -0.76
CCDC144B-201ENST00000285176 SMCO2A6NFE2 343 aa10.31□□□□□ -0.76
CCDC144B-201ENST00000285176 CCNT1O60563 726 aaKnown RBP10.31□□□□□ -0.76
CCDC144B-201ENST00000285176 COBLO75128 1261 aa10.31□□□□□ -0.76
CCDC144B-201ENST00000285176 FDPSP14324 419 aaKnown RBP10.31□□□□□ -0.76
CCDC144B-201ENST00000285176 IDEP14735 1019 aa10.31□□□□□ -0.76
CCDC144B-201ENST00000285176 CCDC43Q96MW1 224 aaKnown RBP10.31□□□□□ -0.76
CCDC144B-201ENST00000285176 DNAJC25Q9H1X3 360 aa10.31□□□□□ -0.76
CCDC144B-201ENST00000285176 HPS5Q9UPZ3 1129 aa10.31□□□□□ -0.76
CCDC144B-201ENST00000285176 RPAP1Q9BWH6 1393 aaPredicted RBP10.31□□□□□ -0.76
CCDC144B-201ENST00000285176 IL1R1P14778 569 aa10.31□□□□□ -0.76
CCDC144B-201ENST00000285176 TXKP42681 527 aa10.31□□□□□ -0.76
CCDC144B-201ENST00000285176 ECE1P42892 770 aa10.31□□□□□ -0.76
CCDC144B-201ENST00000285176 NOM1Q5C9Z4 860 aaKnown RBP10.31□□□□□ -0.76
CCDC144B-201ENST00000285176 SULF1Q8IWU6 871 aa10.31□□□□□ -0.76
CCDC144B-201ENST00000285176 SRBD1Q8N5C6 995 aaKnown RBP10.31□□□□□ -0.76
CCDC144B-201ENST00000285176 PAGR1Q9BTK6 254 aa10.31□□□□□ -0.76
CCDC144B-201ENST00000285176 GGA3Q9NZ52 723 aa10.31□□□□□ -0.76
CCDC144B-201ENST00000285176 CRYBG1Q9Y4K1 1723 aa10.31□□□□□ -0.76
CCDC144B-201ENST00000285176 WDHD1O75717 1129 aaPredicted RBP10.31□□□□□ -0.76
CCDC144B-201ENST00000285176 KRT18P05783 430 aaKnown RBP10.31□□□□□ -0.76
CCDC144B-201ENST00000285176 DACT2Q5SW24 774 aa10.31□□□□□ -0.76
CCDC144B-201ENST00000285176 ANO1Q5XXA6 986 aa10.31□□□□□ -0.76
CCDC144B-201ENST00000285176 APOBEC3HQ6NTF7 200 aaKnown RBP10.31□□□□□ -0.76
CCDC144B-201ENST00000285176 GAS2L3Q86XJ1 694 aa10.31□□□□□ -0.76
CCDC144B-201ENST00000285176 ZNF341Q9BYN7 854 aa10.31□□□□□ -0.76
CCDC144B-201ENST00000285176 PICK1Q9NRD5 415 aa10.31□□□□□ -0.76
CCDC144B-201ENST00000285176 SAMM50Q9Y512 469 aa10.31□□□□□ -0.76
CCDC144B-201ENST00000285176 EPS15P42566 896 aa10.3□□□□□ -0.76
CCDC144B-201ENST00000285176 SYKP43405 635 aa10.3□□□□□ -0.76
CCDC144B-201ENST00000285176 SMARCC2Q8TAQ2 1214 aa10.3□□□□□ -0.76
CCDC144B-201ENST00000285176 WRNIP1Q96S55 665 aa10.3□□□□□ -0.76
CCDC144B-201ENST00000285176 TTLL1O95922 423 aa10.3□□□□□ -0.76
CCDC144B-201ENST00000285176 SCG2P13521 617 aa10.3□□□□□ -0.76
CCDC144B-201ENST00000285176 ZKSCAN4Q969J2 545 aaPredicted RBP10.3□□□□□ -0.76
CCDC144B-201ENST00000285176 GJA10Q969M2 543 aa10.3□□□□□ -0.76
CCDC144B-201ENST00000285176 COL1A1P02452 1464 aaPredicted RBP10.3□□□□□ -0.76
CCDC144B-201ENST00000285176 FLOT1O75955 427 aa10.3□□□□□ -0.76
CCDC144B-201ENST00000285176 LLPHQ9BRT6 129 aaKnown RBP10.3□□□□□ -0.76
CCDC144B-201ENST00000285176 POLD4Q9HCU8 107 aa10.3□□□□□ -0.76
CCDC144B-201ENST00000285176 MYOZ2Q9NPC6 264 aa10.3□□□□□ -0.76
CCDC144B-201ENST00000285176 PCDHB6Q9Y5E3 794 aa10.3□□□□□ -0.76
CCDC144B-201ENST00000285176 USP17L10C9JJH3 530 aa10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 EPB41L2O43491 1005 aaKnown RBP10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 TOP1P11387 765 aaKnown RBP10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 UBA7P41226 1012 aa10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 LIFRP42702 1097 aa10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 SPP2Q13103 211 aa10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 KIF4BQ2VIQ3 1234 aa10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 CCDC183Q5T5S1 534 aa10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 PODXL2Q9NZ53 605 aa10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 ZNF70Q9UC06 446 aaPredicted RBP10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 USP17L15C9J2P7 530 aa10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 USP17L13C9JLJ4 530 aa10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 USP17L11C9JVI0 530 aa10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 USP17L18D6R9N7 530 aa10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 USP17L22D6RA61 530 aa10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 USP17L17D6RBQ6 530 aa10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 USP17L19D6RCP7 530 aa10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 USP17L20D6RJB6 530 aa10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 ALAS1P13196 640 aa10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 STX17P56962 302 aa10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 USP17L24Q0WX57 530 aa10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 PTPN21Q16825 1174 aa10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 USP17L6PQ6QN14 398 aa10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 GRAMD1CQ8IYS0 662 aa10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 CEP57L1Q8IYX8 460 aa10.29□□□□□ -0.76
CCDC144B-201ENST00000285176 ACER1Q8TDN7 264 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms