RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 SYT10Q6XYQ8 523 aa20.93■□□□□ 0.94
PDLIM3-201ENST00000284767 NRXN2Q9P2S2 1712 aa20.93■□□□□ 0.94
PDLIM3-201ENST00000284767 ZNF202O95125 648 aa20.93■□□□□ 0.94
PDLIM3-201ENST00000284767 MARCKSP29966 332 aaPredicted RBP20.93■□□□□ 0.94
PDLIM3-201ENST00000284767 PDE4BQ07343 736 aa20.93■□□□□ 0.94
PDLIM3-201ENST00000284767 TRIM22Q8IYM9 498 aa20.93■□□□□ 0.94
PDLIM3-201ENST00000284767 NOL10Q9BSC4 688 aaKnown RBP20.93■□□□□ 0.94
PDLIM3-201ENST00000284767 ZNF446Q9NWS9 450 aa20.93■□□□□ 0.94
PDLIM3-201ENST00000284767 PPP4CP60510 307 aa20.92■□□□□ 0.94
PDLIM3-201ENST00000284767 CATIPQ7Z7H3 387 aa20.92■□□□□ 0.94
PDLIM3-201ENST00000284767 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.92■□□□□ 0.94
PDLIM3-201ENST00000284767 PHLPP2Q6ZVD8 1323 aa20.92■□□□□ 0.94
PDLIM3-201ENST00000284767 CMA1P23946 247 aa20.92■□□□□ 0.94
PDLIM3-201ENST00000284767 TFAP4Q01664 338 aa20.92■□□□□ 0.94
PDLIM3-201ENST00000284767 ANO1Q5XXA6 986 aa20.92■□□□□ 0.94
PDLIM3-201ENST00000284767 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.92■□□□□ 0.94
PDLIM3-201ENST00000284767 TNS1Q9HBL0 1735 aaKnown RBP20.92■□□□□ 0.94
PDLIM3-201ENST00000284767 CCDC66A2RUB6 948 aa20.92■□□□□ 0.94
PDLIM3-201ENST00000284767 LDHCP07864 332 aa20.92■□□□□ 0.94
PDLIM3-201ENST00000284767 RCSD1Q6JBY9 416 aa20.92■□□□□ 0.94
PDLIM3-201ENST00000284767 DPP8Q6V1X1 898 aaPredicted RBP20.92■□□□□ 0.94
PDLIM3-201ENST00000284767 CERS5Q8N5B7 392 aa20.92■□□□□ 0.94
PDLIM3-201ENST00000284767 TIGD1Q96MW7 591 aa20.92■□□□□ 0.94
PDLIM3-201ENST00000284767 PDGFDQ9GZP0 370 aaPredicted RBP20.92■□□□□ 0.94
PDLIM3-201ENST00000284767 IL17RBQ9NRM6 502 aa20.92■□□□□ 0.94
PDLIM3-201ENST00000284767 CCDC196A0A1B0GTZ2 297 aa20.91■□□□□ 0.94
PDLIM3-201ENST00000284767 PCP11498 1178 aaKnown RBP20.91■□□□□ 0.94
PDLIM3-201ENST00000284767 PDE6BP35913 854 aa20.91■□□□□ 0.94
PDLIM3-201ENST00000284767 NR5A1Q13285 461 aa20.91■□□□□ 0.94
PDLIM3-201ENST00000284767 ERCC6LQ2NKX8 1250 aa20.91■□□□□ 0.94
PDLIM3-201ENST00000284767 TEX11Q8IYF3 940 aa20.91■□□□□ 0.94
PDLIM3-201ENST00000284767 FLAD1Q8NFF5 587 aa20.91■□□□□ 0.94
PDLIM3-201ENST00000284767 ZC3H12CQ9C0D7 883 aaKnown RBP20.91■□□□□ 0.94
PDLIM3-201ENST00000284767 KCNQ5Q9NR82 932 aa20.91■□□□□ 0.94
PDLIM3-201ENST00000284767 GPR75-ASB3A0A0A6YYF3 556 aa20.91■□□□□ 0.94
PDLIM3-201ENST00000284767 USP17L3A6NCW0 530 aa20.91■□□□□ 0.94
PDLIM3-201ENST00000284767 USP17L4A6NCW7 530 aa20.91■□□□□ 0.94
PDLIM3-201ENST00000284767 CHRNA5P30532 468 aa20.91■□□□□ 0.94
PDLIM3-201ENST00000284767 FUT2Q10981 343 aa20.91■□□□□ 0.94
PDLIM3-201ENST00000284767 USP17L1Q7RTZ2 530 aa20.91■□□□□ 0.94
PDLIM3-201ENST00000284767 DIS3L2Q8IYB7 885 aaKnown RBP20.91■□□□□ 0.94
PDLIM3-201ENST00000284767 OXER1Q8TDS5 423 aa20.91■□□□□ 0.94
PDLIM3-201ENST00000284767 DEXIO95424 95 aa20.9■□□□□ 0.94
PDLIM3-201ENST00000284767 MMP1P03956 469 aa20.9■□□□□ 0.94
PDLIM3-201ENST00000284767 RHBDL3P58872 404 aa20.9■□□□□ 0.94
PDLIM3-201ENST00000284767 ETF1P62495 437 aaKnown RBP20.9■□□□□ 0.94
PDLIM3-201ENST00000284767 FANCCQ00597 558 aa20.9■□□□□ 0.94
PDLIM3-201ENST00000284767 AXDND1Q5T1B0 1012 aaPredicted RBP20.9■□□□□ 0.94
PDLIM3-201ENST00000284767 MASTLQ96GX5 879 aa20.9■□□□□ 0.94
PDLIM3-201ENST00000284767 V9GY48 417 aaPredicted RBP20.9■□□□□ 0.94
PDLIM3-201ENST00000284767 WDHD1O75717 1129 aaPredicted RBP20.9■□□□□ 0.94
PDLIM3-201ENST00000284767 PKN1Q16512 942 aa20.9■□□□□ 0.94
PDLIM3-201ENST00000284767 MKNK2Q9HBH9 465 aa20.9■□□□□ 0.94
PDLIM3-201ENST00000284767 VPS54Q9P1Q0 977 aa20.9■□□□□ 0.94
PDLIM3-201ENST00000284767 MTMR7Q9Y216 660 aa20.9■□□□□ 0.94
PDLIM3-201ENST00000284767 CBFA2T2O43439 604 aa20.89■□□□□ 0.93
PDLIM3-201ENST00000284767 PFKFB1P16118 471 aa20.89■□□□□ 0.93
PDLIM3-201ENST00000284767 ALDH1B1P30837 517 aa20.89■□□□□ 0.93
PDLIM3-201ENST00000284767 TMED8Q6PL24 325 aaPredicted RBP20.89■□□□□ 0.93
PDLIM3-201ENST00000284767 TMC4Q7Z404 712 aa20.89■□□□□ 0.93
PDLIM3-201ENST00000284767 C2CD5Q86YS7 1000 aa20.89■□□□□ 0.93
PDLIM3-201ENST00000284767 SRRTQ9BXP5 876 aaKnown RBP20.89■□□□□ 0.93
PDLIM3-201ENST00000284767 BIN1O00499 593 aa20.89■□□□□ 0.93
PDLIM3-201ENST00000284767 RCAN1P53805 252 aa20.89■□□□□ 0.93
PDLIM3-201ENST00000284767 DBNDD1Q9H9R9 158 aa20.89■□□□□ 0.93
PDLIM3-201ENST00000284767 DAGLAQ9Y4D2 1042 aa20.89■□□□□ 0.93
PDLIM3-201ENST00000284767 FLT1P17948 1338 aa20.88■□□□□ 0.93
PDLIM3-201ENST00000284767 CDK5RAP2Q96SN8 1893 aa20.88■□□□□ 0.93
PDLIM3-201ENST00000284767 MYO1BO43795 1136 aa20.88■□□□□ 0.93
PDLIM3-201ENST00000284767 VEGFAP15692 232 aaPredicted RBP20.88■□□□□ 0.93
PDLIM3-201ENST00000284767 SCNN1DP51172 638 aa20.88■□□□□ 0.93
PDLIM3-201ENST00000284767 HOMER1Q86YM7 354 aa20.88■□□□□ 0.93
PDLIM3-201ENST00000284767 WASF1Q92558 559 aa20.88■□□□□ 0.93
PDLIM3-201ENST00000284767 COA1Q9GZY4 146 aa20.88■□□□□ 0.93
PDLIM3-201ENST00000284767 TUBE1Q9UJT0 475 aa20.88■□□□□ 0.93
PDLIM3-201ENST00000284767 NAV1Q8NEY1 1877 aa20.88■□□□□ 0.93
PDLIM3-201ENST00000284767 FAM205AQ6ZU69 1335 aa20.88■□□□□ 0.93
PDLIM3-201ENST00000284767 SRBD1Q8N5C6 995 aaKnown RBP20.88■□□□□ 0.93
PDLIM3-201ENST00000284767 TBC1D22AQ8WUA7 517 aa20.88■□□□□ 0.93
PDLIM3-201ENST00000284767 MAP3K14Q99558 947 aa20.88■□□□□ 0.93
PDLIM3-201ENST00000284767 DLEC1Q9Y238 1755 aa20.87■□□□□ 0.93
PDLIM3-201ENST00000284767 HMGB2P26583 209 aaKnown RBP20.87■□□□□ 0.93
PDLIM3-201ENST00000284767 CLCN6P51797 869 aa20.87■□□□□ 0.93
PDLIM3-201ENST00000284767 SLC15A2Q16348 729 aa20.87■□□□□ 0.93
PDLIM3-201ENST00000284767 NOSTRINQ8IVI9 506 aa20.87■□□□□ 0.93
PDLIM3-201ENST00000284767 ARGLU1Q9NWB6 273 aaPredicted RBP20.87■□□□□ 0.93
PDLIM3-201ENST00000284767 FHOD1Q9Y613 1164 aa20.87■□□□□ 0.93
PDLIM3-201ENST00000284767 MYH6P13533 1939 aa20.87■□□□□ 0.93
PDLIM3-201ENST00000284767 FAM205CA6NFA0 338 aa20.87■□□□□ 0.93
PDLIM3-201ENST00000284767 LMOD1P29536 600 aaPredicted RBP20.87■□□□□ 0.93
PDLIM3-201ENST00000284767 TOB1P50616 345 aaPredicted RBP20.87■□□□□ 0.93
PDLIM3-201ENST00000284767 PICALMQ13492 652 aa20.87■□□□□ 0.93
PDLIM3-201ENST00000284767 SLC39A14Q15043 492 aa20.87■□□□□ 0.93
PDLIM3-201ENST00000284767 TMTC3Q6ZXV5 915 aa20.87■□□□□ 0.93
PDLIM3-201ENST00000284767 RASGRP2Q7LDG7 609 aa20.87■□□□□ 0.93
PDLIM3-201ENST00000284767 FCHSD1Q86WN1 690 aa20.87■□□□□ 0.93
PDLIM3-201ENST00000284767 RNF26Q9BY78 433 aaPredicted RBP20.87■□□□□ 0.93
PDLIM3-201ENST00000284767 HSD3B7Q9H2F3 369 aa20.87■□□□□ 0.93
PDLIM3-201ENST00000284767 ATP2B1P20020 1258 aa20.86■□□□□ 0.93
PDLIM3-201ENST00000284767 PTPAQ15257 358 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms