RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 TMEM39BQ9GZU3 492 aa12.69□□□□□ -0.38
GGPS1-201ENST00000282841 GPCPD1Q9NPB8 672 aa12.69□□□□□ -0.38
GGPS1-201ENST00000282841 SERPINA10Q9UK55 444 aa12.69□□□□□ -0.38
GGPS1-201ENST00000282841 WNT7AO00755 349 aa12.69□□□□□ -0.38
GGPS1-201ENST00000282841 VIL1P09327 827 aaKnown RBP12.69□□□□□ -0.38
GGPS1-201ENST00000282841 SF3A1Q15459 793 aaKnown RBP12.69□□□□□ -0.38
GGPS1-201ENST00000282841 SAMD7Q7Z3H4 446 aa12.69□□□□□ -0.38
GGPS1-201ENST00000282841 CCDC84Q86UT8 332 aaPredicted RBP12.69□□□□□ -0.38
GGPS1-201ENST00000282841 DGKHQ86XP1 1220 aa12.69□□□□□ -0.38
GGPS1-201ENST00000282841 GOLPH3LQ9H4A5 285 aa12.69□□□□□ -0.38
GGPS1-201ENST00000282841 CABP5Q9NP86 173 aa12.69□□□□□ -0.38
GGPS1-201ENST00000282841 CNTNAP5Q8WYK1 1306 aa12.69□□□□□ -0.38
GGPS1-201ENST00000282841 DDAH1O94760 285 aa12.68□□□□□ -0.38
GGPS1-201ENST00000282841 MMP1P03956 469 aa12.68□□□□□ -0.38
GGPS1-201ENST00000282841 HLA-DOAP06340 250 aa12.68□□□□□ -0.38
GGPS1-201ENST00000282841 SLC16A2P36021 539 aa12.68□□□□□ -0.38
GGPS1-201ENST00000282841 STK38Q15208 465 aa12.68□□□□□ -0.38
GGPS1-201ENST00000282841 TYW1BQ6NUM6 668 aa12.68□□□□□ -0.38
GGPS1-201ENST00000282841 TMED8Q6PL24 325 aaPredicted RBP12.68□□□□□ -0.38
GGPS1-201ENST00000282841 CSRNP1Q96S65 589 aa12.68□□□□□ -0.38
GGPS1-201ENST00000282841 RBSNQ9H1K0 784 aa12.68□□□□□ -0.38
GGPS1-201ENST00000282841 CFAP45Q9UL16 551 aa12.68□□□□□ -0.38
GGPS1-201ENST00000282841 A0A1B0GVL5 298 aa12.68□□□□□ -0.38
GGPS1-201ENST00000282841 SPDYE2BA6NHP3 402 aa12.68□□□□□ -0.38
GGPS1-201ENST00000282841 SPDYE6P0CI01 402 aa12.68□□□□□ -0.38
GGPS1-201ENST00000282841 CLIC6Q96NY7 704 aa12.68□□□□□ -0.38
GGPS1-201ENST00000282841 GMLQ99445 158 aa12.68□□□□□ -0.38
GGPS1-201ENST00000282841 MTMR4Q9NYA4 1195 aa12.68□□□□□ -0.38
GGPS1-201ENST00000282841 PCDHA7Q9UN72 937 aa12.68□□□□□ -0.38
GGPS1-201ENST00000282841 ECM29Q5VYK3 1845 aa12.68□□□□□ -0.38
GGPS1-201ENST00000282841 FSD2A1L4K1 749 aa12.67□□□□□ -0.38
GGPS1-201ENST00000282841 KLRF2D3W0D1 207 aa12.67□□□□□ -0.38
GGPS1-201ENST00000282841 PRAMEF18Q5VWM3 479 aa12.67□□□□□ -0.38
GGPS1-201ENST00000282841 TTBK2Q6IQ55 1244 aa12.67□□□□□ -0.38
GGPS1-201ENST00000282841 KCTD1Q719H9 257 aa12.67□□□□□ -0.38
GGPS1-201ENST00000282841 TRIM34Q9BYJ4 488 aa12.67□□□□□ -0.38
GGPS1-201ENST00000282841 GRPEL1Q9HAV7 217 aa12.67□□□□□ -0.38
GGPS1-201ENST00000282841 ZNF287Q9HBT7 754 aa12.67□□□□□ -0.38
GGPS1-201ENST00000282841 FZD1Q9UP38 647 aa12.67□□□□□ -0.38
GGPS1-201ENST00000282841 TOB1P50616 345 aaPredicted RBP12.67□□□□□ -0.38
GGPS1-201ENST00000282841 SEPT2Q15019 361 aa12.67□□□□□ -0.38
GGPS1-201ENST00000282841 TBC1D10BQ4KMP7 808 aaPredicted RBP12.67□□□□□ -0.38
GGPS1-201ENST00000282841 HEATR3Q7Z4Q2 680 aa12.67□□□□□ -0.38
GGPS1-201ENST00000282841 CERS3Q8IU89 383 aa12.67□□□□□ -0.38
GGPS1-201ENST00000282841 CCAR1Q8IX12 1150 aaKnown RBP12.67□□□□□ -0.38
GGPS1-201ENST00000282841 ZNF396Q96N95 335 aaPredicted RBP12.67□□□□□ -0.38
GGPS1-201ENST00000282841 MTA3Q9BTC8 594 aa12.67□□□□□ -0.38
GGPS1-201ENST00000282841 ZNF70Q9UC06 446 aaPredicted RBP12.67□□□□□ -0.38
GGPS1-201ENST00000282841 SNAP25P60880 206 aa12.67□□□□□ -0.38
GGPS1-201ENST00000282841 CIAPIN1Q6FI81 312 aa12.67□□□□□ -0.38
GGPS1-201ENST00000282841 ARHGAP27Q6ZUM4 889 aa12.67□□□□□ -0.38
GGPS1-201ENST00000282841 NUP88Q99567 741 aaPredicted RBP12.67□□□□□ -0.38
GGPS1-201ENST00000282841 RNF26Q9BY78 433 aaPredicted RBP12.67□□□□□ -0.38
GGPS1-201ENST00000282841 FHDC1Q9C0D6 1143 aaPredicted RBP12.67□□□□□ -0.38
GGPS1-201ENST00000282841 RCOR1Q9UKL0 485 aa12.67□□□□□ -0.38
GGPS1-201ENST00000282841 PCDHB6Q9Y5E3 794 aa12.67□□□□□ -0.38
GGPS1-201ENST00000282841 PRPF3O43395 683 aaKnown RBP12.66□□□□□ -0.38
GGPS1-201ENST00000282841 CALM1P0DP23 149 aa12.66□□□□□ -0.38
GGPS1-201ENST00000282841 CALM2P0DP24 149 aa12.66□□□□□ -0.38
GGPS1-201ENST00000282841 CALM3P0DP25 149 aa12.66□□□□□ -0.38
GGPS1-201ENST00000282841 GRIN1Q05586 938 aa12.66□□□□□ -0.38
GGPS1-201ENST00000282841 CERKLQ49MI3 558 aaPredicted RBP12.66□□□□□ -0.38
GGPS1-201ENST00000282841 ANO1Q5XXA6 986 aa12.66□□□□□ -0.38
GGPS1-201ENST00000282841 NOSTRINQ8IVI9 506 aa12.66□□□□□ -0.38
GGPS1-201ENST00000282841 LINC00301Q8NCQ3 95 aa12.66□□□□□ -0.38
GGPS1-201ENST00000282841 RBM28Q9NW13 759 aaKnown RBP12.66□□□□□ -0.38
GGPS1-201ENST00000282841 PI4KBQ9UBF8 816 aa12.66□□□□□ -0.38
GGPS1-201ENST00000282841 MYH6P13533 1939 aa12.66□□□□□ -0.38
GGPS1-201ENST00000282841 STK36Q9NRP7 1315 aa12.66□□□□□ -0.38
GGPS1-201ENST00000282841 WNT10BO00744 389 aa12.66□□□□□ -0.38
GGPS1-201ENST00000282841 TAL1P17542 331 aaPredicted RBP12.66□□□□□ -0.38
GGPS1-201ENST00000282841 CSPP1Q1MSJ5 1256 aa12.66□□□□□ -0.38
GGPS1-201ENST00000282841 SPICE1Q8N0Z3 855 aa12.66□□□□□ -0.38
GGPS1-201ENST00000282841 PLCD3Q8N3E9 789 aa12.66□□□□□ -0.38
GGPS1-201ENST00000282841 DLEC1Q9Y238 1755 aa12.65□□□□□ -0.38
GGPS1-201ENST00000282841 SCG2P13521 617 aa12.65□□□□□ -0.38
GGPS1-201ENST00000282841 KIF5BP33176 963 aa12.65□□□□□ -0.38
GGPS1-201ENST00000282841 NLRP5P59047 1200 aa12.65□□□□□ -0.38
GGPS1-201ENST00000282841 GRM4Q14833 912 aa12.65□□□□□ -0.38
GGPS1-201ENST00000282841 SAFBQ15424 915 aaKnown RBP eCLIP12.65□□□□□ -0.38
GGPS1-201ENST00000282841 DLK2Q6UY11 383 aa12.65□□□□□ -0.38
GGPS1-201ENST00000282841 PIGSQ96S52 555 aa12.65□□□□□ -0.38
GGPS1-201ENST00000282841 IDI2Q9BXS1 227 aa12.65□□□□□ -0.38
GGPS1-201ENST00000282841 SPTLC2O15270 562 aa12.65□□□□□ -0.38
GGPS1-201ENST00000282841 GH2P01242 217 aa12.65□□□□□ -0.38
GGPS1-201ENST00000282841 PARP1P09874 1014 aaKnown RBP12.65□□□□□ -0.38
GGPS1-201ENST00000282841 TOP1P11387 765 aaKnown RBP12.65□□□□□ -0.38
GGPS1-201ENST00000282841 EEF2P13639 858 aaKnown RBP12.65□□□□□ -0.38
GGPS1-201ENST00000282841 U2AF2P26368 475 aaKnown RBP eCLIP12.65□□□□□ -0.38
GGPS1-201ENST00000282841 ZYXQ15942 572 aaKnown RBP12.65□□□□□ -0.38
GGPS1-201ENST00000282841 FSIP1Q8NA03 581 aa12.65□□□□□ -0.38
GGPS1-201ENST00000282841 WASF1Q92558 559 aa12.65□□□□□ -0.38
GGPS1-201ENST00000282841 ZNF646O15015 1829 aaPredicted RBP12.65□□□□□ -0.38
GGPS1-201ENST00000282841 NID2Q14112 1375 aa12.65□□□□□ -0.39
GGPS1-201ENST00000282841 PDHBP11177 359 aa12.64□□□□□ -0.39
GGPS1-201ENST00000282841 GMPSP49915 693 aaPredicted RBP12.64□□□□□ -0.39
GGPS1-201ENST00000282841 FKBP1AP62942 108 aaKnown RBP12.64□□□□□ -0.39
GGPS1-201ENST00000282841 NPY5RQ15761 445 aa12.64□□□□□ -0.39
GGPS1-201ENST00000282841 CCDC183Q5T5S1 534 aa12.64□□□□□ -0.39
GGPS1-201ENST00000282841 WWC2Q6AWC2 1192 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms