RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 VDRP11473 427 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 SELPP16109 830 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 EIF5P55010 431 aaKnown RBP3.49□□□□□ -1.85
HERC4-201ENST00000277817 PABPC4Q13310 644 aaKnown RBP eCLIP3.49□□□□□ -1.85
HERC4-201ENST00000277817 C11orf91Q3C1V1 193 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 ANKRD45Q5TZF3 282 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 ZKSCAN2Q63HK3 967 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 SV2BQ7L1I2 683 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 REXO1Q8N1G1 1221 aaKnown RBP3.49□□□□□ -1.85
HERC4-201ENST00000277817 PJA1Q8NG27 643 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 GJA10Q969M2 543 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 LTV1Q96GA3 475 aaPredicted RBP3.49□□□□□ -1.85
HERC4-201ENST00000277817 OBP2AQ9NY56 170 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 PDZRN3Q9UPQ7 1066 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 KCNMB2Q9Y691 235 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 ANKRD30BQ9BXX2 1392 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 PLCG2P16885 1265 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 HDAC1Q13547 482 aaPredicted RBP3.49□□□□□ -1.85
HERC4-201ENST00000277817 GRM2Q14416 872 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 DHCR24Q15392 516 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 ZRSR1Q15695 479 aaKnown RBP3.49□□□□□ -1.85
HERC4-201ENST00000277817 PPP4R3BQ5MIZ7 849 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 HYIQ5T013 277 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 PANK1Q8TE04 598 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 KLRG1Q96E93 195 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 NEUROD4Q9HD90 331 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 TCEAL9Q9UHQ7 104 aa3.49□□□□□ -1.85
HERC4-201ENST00000277817 TNKSO95271 1327 aa3.48□□□□□ -1.85
HERC4-201ENST00000277817 EVC2Q86UK5 1308 aa3.48□□□□□ -1.85
HERC4-201ENST00000277817 GABBR2O75899 941 aa3.48□□□□□ -1.85
HERC4-201ENST00000277817 GJB6O95452 261 aa3.48□□□□□ -1.85
HERC4-201ENST00000277817 SMTNP53814 917 aa3.48□□□□□ -1.85
HERC4-201ENST00000277817 RIPK4P57078 832 aa3.48□□□□□ -1.85
HERC4-201ENST00000277817 KCTD2Q14681 263 aa3.48□□□□□ -1.85
HERC4-201ENST00000277817 RTN1Q16799 776 aa3.48□□□□□ -1.85
HERC4-201ENST00000277817 NBPF20Q3BBV1 942 aa3.48□□□□□ -1.85
HERC4-201ENST00000277817 FNDC3BQ53EP0 1204 aaKnown RBP3.48□□□□□ -1.85
HERC4-201ENST00000277817 RC3H1Q5TC82 1133 aaKnown RBP3.48□□□□□ -1.85
HERC4-201ENST00000277817 CXorf57Q6NSI4 855 aaKnown RBP3.48□□□□□ -1.85
HERC4-201ENST00000277817 C1orf122Q6ZSJ8 110 aa3.48□□□□□ -1.85
HERC4-201ENST00000277817 EDEM1Q92611 657 aa3.48□□□□□ -1.85
HERC4-201ENST00000277817 GBP4Q96PP9 640 aa3.48□□□□□ -1.85
HERC4-201ENST00000277817 PAGR1Q9BTK6 254 aa3.48□□□□□ -1.85
HERC4-201ENST00000277817 UNC93B1Q9H1C4 597 aa3.48□□□□□ -1.85
HERC4-201ENST00000277817 PPM1HQ9ULR3 514 aa3.48□□□□□ -1.85
HERC4-201ENST00000277817 MAPK8IP1Q9UQF2 711 aa3.48□□□□□ -1.85
HERC4-201ENST00000277817 OVOS2A0A0G2JMS6 1433 aa3.48□□□□□ -1.85
HERC4-201ENST00000277817 EGFRP00533 1210 aa3.48□□□□□ -1.85
HERC4-201ENST00000277817 CEBPAP49715 358 aaPredicted RBP3.48□□□□□ -1.85
HERC4-201ENST00000277817 ALDH5A1P51649 535 aaPredicted RBP3.48□□□□□ -1.85
HERC4-201ENST00000277817 GJA9P57773 515 aa3.48□□□□□ -1.85
HERC4-201ENST00000277817 OXLD1Q5BKU9 147 aa3.48□□□□□ -1.85
HERC4-201ENST00000277817 TMEM240Q5SV17 173 aa3.48□□□□□ -1.85
HERC4-201ENST00000277817 PEAR1Q5VY43 1037 aaPredicted RBP3.48□□□□□ -1.85
HERC4-201ENST00000277817 AGMOQ6ZNB7 445 aa3.48□□□□□ -1.85
HERC4-201ENST00000277817 CHPFQ8IZ52 775 aa3.48□□□□□ -1.85
HERC4-201ENST00000277817 STK31Q9BXU1 1019 aa3.48□□□□□ -1.85
HERC4-201ENST00000277817 KIAA0232Q92628 1395 aa3.48□□□□□ -1.85
HERC4-201ENST00000277817 GOLGA6L4A6NEF3 574 aa3.48□□□□□ -1.85
HERC4-201ENST00000277817 GOLGA6L3A6NEY3 463 aa3.48□□□□□ -1.85
HERC4-201ENST00000277817 PRSS47A8MTI9 375 aa3.48□□□□□ -1.85
HERC4-201ENST00000277817 PPP2R1AP30153 589 aa3.48□□□□□ -1.85
HERC4-201ENST00000277817 AMPHP49418 695 aa3.48□□□□□ -1.85
HERC4-201ENST00000277817 ERVK-21P61565 698 aa3.48□□□□□ -1.85
HERC4-201ENST00000277817 KIAA1211Q6ZU35 1233 aa3.48□□□□□ -1.85
HERC4-201ENST00000277817 CHST15Q7LFX5 561 aaPredicted RBP3.48□□□□□ -1.85
HERC4-201ENST00000277817 PKNOX2Q96KN3 472 aa3.48□□□□□ -1.85
HERC4-201ENST00000277817 HINFPQ9BQA5 517 aa3.48□□□□□ -1.85
HERC4-201ENST00000277817 SUV39H2Q9H5I1 410 aa3.48□□□□□ -1.85
HERC4-201ENST00000277817 COL11A2P13942 1736 aaPredicted RBP3.48□□□□□ -1.85
HERC4-201ENST00000277817 MTHFSP49914 203 aa3.47□□□□□ -1.85
HERC4-201ENST00000277817 RPS26P62854 115 aaKnown RBP3.47□□□□□ -1.85
HERC4-201ENST00000277817 TRIP4Q15650 581 aaPredicted RBP3.47□□□□□ -1.85
HERC4-201ENST00000277817 CCDC93Q567U6 631 aa3.47□□□□□ -1.85
HERC4-201ENST00000277817 C10orf62Q5T681 223 aaPredicted RBP3.47□□□□□ -1.85
HERC4-201ENST00000277817 FOXB2Q5VYV0 432 aa3.47□□□□□ -1.85
HERC4-201ENST00000277817 SCUBE3Q8IX30 993 aa3.47□□□□□ -1.85
HERC4-201ENST00000277817 DDX1Q92499 740 aaKnown RBP3.47□□□□□ -1.85
HERC4-201ENST00000277817 BAP1Q92560 729 aa3.47□□□□□ -1.85
HERC4-201ENST00000277817 KIF2CQ99661 725 aa3.47□□□□□ -1.85
HERC4-201ENST00000277817 NCOA5Q9HCD5 579 aaKnown RBP3.47□□□□□ -1.85
HERC4-201ENST00000277817 PRDM6Q9NQX0 595 aa3.47□□□□□ -1.85
HERC4-201ENST00000277817 SLC5A1P13866 664 aa3.47□□□□□ -1.85
HERC4-201ENST00000277817 ZAP70P43403 619 aa3.47□□□□□ -1.85
HERC4-201ENST00000277817 LSRQ86X29 649 aaPredicted RBP3.47□□□□□ -1.85
HERC4-201ENST00000277817 DZIP1LQ8IYY4 767 aaKnown RBP3.47□□□□□ -1.85
HERC4-201ENST00000277817 GSTCDQ8NEC7 633 aa3.47□□□□□ -1.85
HERC4-201ENST00000277817 ERP27Q96DN0 273 aa3.47□□□□□ -1.85
HERC4-201ENST00000277817 CDK15Q96Q40 435 aa3.47□□□□□ -1.85
HERC4-201ENST00000277817 SPEF1Q9Y4P9 236 aa3.47□□□□□ -1.85
HERC4-201ENST00000277817 BCAR3O75815 825 aa3.47□□□□□ -1.85
HERC4-201ENST00000277817 ASMTLO95671 621 aa3.47□□□□□ -1.85
HERC4-201ENST00000277817 PGRP06401 933 aa3.47□□□□□ -1.85
HERC4-201ENST00000277817 HMOX1P09601 288 aa3.47□□□□□ -1.85
HERC4-201ENST00000277817 C6orf222P0C671 652 aaPredicted RBP3.47□□□□□ -1.85
HERC4-201ENST00000277817 LPOP22079 712 aaPredicted RBP3.47□□□□□ -1.85
HERC4-201ENST00000277817 MSNP26038 577 aaKnown RBP3.47□□□□□ -1.85
HERC4-201ENST00000277817 RASIP1Q5U651 963 aa3.47□□□□□ -1.85
HERC4-201ENST00000277817 SAMD7Q7Z3H4 446 aa3.47□□□□□ -1.85
HERC4-201ENST00000277817 NIM1KQ8IY84 436 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms