RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 POLA2Q14181 598 aa12.57□□□□□ -0.4
USP6NL-201ENST00000277575 NEK8Q86SG6 692 aa12.57□□□□□ -0.4
USP6NL-201ENST00000277575 FBXO11Q86XK2 927 aa12.57□□□□□ -0.4
USP6NL-201ENST00000277575 NELFBQ8WX92 580 aa12.57□□□□□ -0.4
USP6NL-201ENST00000277575 PLCD4Q9BRC7 762 aa12.57□□□□□ -0.4
USP6NL-201ENST00000277575 MRPL44Q9H9J2 332 aaKnown RBP12.57□□□□□ -0.4
USP6NL-201ENST00000277575 CDC42BPAQ5VT25 1732 aa12.57□□□□□ -0.4
USP6NL-201ENST00000277575 RNF187Q5TA31 235 aaPredicted RBP12.57□□□□□ -0.4
USP6NL-201ENST00000277575 CCDC84Q86UT8 332 aaPredicted RBP12.57□□□□□ -0.4
USP6NL-201ENST00000277575 TTC16Q8NEE8 873 aa12.57□□□□□ -0.4
USP6NL-201ENST00000277575 NUP58Q9BVL2 599 aa12.57□□□□□ -0.4
USP6NL-201ENST00000277575 AS3MTQ9HBK9 375 aa12.57□□□□□ -0.4
USP6NL-201ENST00000277575 NR1I2O75469 434 aa12.57□□□□□ -0.4
USP6NL-201ENST00000277575 CMA1P23946 247 aa12.57□□□□□ -0.4
USP6NL-201ENST00000277575 EAPPQ56P03 285 aaPredicted RBP12.57□□□□□ -0.4
USP6NL-201ENST00000277575 MCTP2Q6DN12 878 aa12.57□□□□□ -0.4
USP6NL-201ENST00000277575 DPY19L2Q6NUT2 758 aa12.57□□□□□ -0.4
USP6NL-201ENST00000277575 CLEC4GQ6UXB4 293 aa12.57□□□□□ -0.4
USP6NL-201ENST00000277575 KIFAP3Q92845 792 aa12.57□□□□□ -0.4
USP6NL-201ENST00000277575 ATP10DQ9P241 1426 aa12.57□□□□□ -0.4
USP6NL-201ENST00000277575 IGKV5-2P06315 115 aa12.56□□□□□ -0.4
USP6NL-201ENST00000277575 VAV2P52735 878 aa12.56□□□□□ -0.4
USP6NL-201ENST00000277575 ABCB5Q2M3G0 1257 aa12.56□□□□□ -0.4
USP6NL-201ENST00000277575 PRR16Q569H4 304 aa12.56□□□□□ -0.4
USP6NL-201ENST00000277575 GALNT17Q6IS24 598 aa12.56□□□□□ -0.4
USP6NL-201ENST00000277575 ARHGAP27Q6ZUM4 889 aa12.56□□□□□ -0.4
USP6NL-201ENST00000277575 KRT222Q8N1A0 295 aa12.56□□□□□ -0.4
USP6NL-201ENST00000277575 IQGAP3Q86VI3 1631 aa12.56□□□□□ -0.4
USP6NL-201ENST00000277575 RHOXF2BP0C7M4 288 aa12.56□□□□□ -0.4
USP6NL-201ENST00000277575 TECP42680 631 aa12.56□□□□□ -0.4
USP6NL-201ENST00000277575 TRPC3Q13507 836 aa12.56□□□□□ -0.4
USP6NL-201ENST00000277575 HLFQ16534 295 aa12.56□□□□□ -0.4
USP6NL-201ENST00000277575 CYP26C1Q6V0L0 522 aa12.56□□□□□ -0.4
USP6NL-201ENST00000277575 MICALCLQ6ZW33 695 aa12.56□□□□□ -0.4
USP6NL-201ENST00000277575 RHOXF2Q9BQY4 288 aa12.56□□□□□ -0.4
USP6NL-201ENST00000277575 TSGA10Q9BZW7 698 aa12.56□□□□□ -0.4
USP6NL-201ENST00000277575 DBNDD1Q9H9R9 158 aa12.56□□□□□ -0.4
USP6NL-201ENST00000277575 MRPL11Q9Y3B7 192 aaKnown RBP12.56□□□□□ -0.4
USP6NL-201ENST00000277575 PCDHA1Q9Y5I3 950 aa12.56□□□□□ -0.4
USP6NL-201ENST00000277575 CPSF1Q10570 1443 aaKnown RBP12.56□□□□□ -0.4
USP6NL-201ENST00000277575 PRKAB2O43741 272 aa12.56□□□□□ -0.4
USP6NL-201ENST00000277575 GPR162Q16538 588 aa12.56□□□□□ -0.4
USP6NL-201ENST00000277575 SLC9C1Q4G0N8 1177 aa12.56□□□□□ -0.4
USP6NL-201ENST00000277575 PUS7LQ9H0K6 701 aaKnown RBP12.56□□□□□ -0.4
USP6NL-201ENST00000277575 A0A1W2PRG0 241 aa12.56□□□□□ -0.4
USP6NL-201ENST00000277575 TMEM232C9JQI7 657 aa12.56□□□□□ -0.4
USP6NL-201ENST00000277575 M0R2C6 588 aa12.56□□□□□ -0.4
USP6NL-201ENST00000277575 OR52Z1P0C646 297 aa12.56□□□□□ -0.4
USP6NL-201ENST00000277575 TNNC1P63316 161 aa12.56□□□□□ -0.4
USP6NL-201ENST00000277575 MTUS1Q9ULD2 1270 aa12.56□□□□□ -0.4
USP6NL-201ENST00000277575 PCDHA7Q9UN72 937 aa12.56□□□□□ -0.4
USP6NL-201ENST00000277575 TESPA1A2RU30 521 aaPredicted RBP12.55□□□□□ -0.4
USP6NL-201ENST00000277575 GNPTABQ3T906 1256 aa12.55□□□□□ -0.4
USP6NL-201ENST00000277575 TMTC1Q8IUR5 882 aa12.55□□□□□ -0.4
USP6NL-201ENST00000277575 PAGR1Q9BTK6 254 aa12.55□□□□□ -0.4
USP6NL-201ENST00000277575 SERPINB13Q9UIV8 391 aa12.55□□□□□ -0.4
USP6NL-201ENST00000277575 CLRN2A0PK11 232 aa12.55□□□□□ -0.4
USP6NL-201ENST00000277575 SPOPO43791 374 aa12.55□□□□□ -0.4
USP6NL-201ENST00000277575 RPS6KA4O75676 772 aa12.55□□□□□ -0.4
USP6NL-201ENST00000277575 TUBBP07437 444 aa12.55□□□□□ -0.4
USP6NL-201ENST00000277575 PTGDRQ13258 359 aa12.55□□□□□ -0.4
USP6NL-201ENST00000277575 LCORLQ8N3X6 602 aa12.55□□□□□ -0.4
USP6NL-201ENST00000277575 GLG1Q92896 1179 aa12.55□□□□□ -0.4
USP6NL-201ENST00000277575 IMPACTQ9P2X3 320 aa12.55□□□□□ -0.4
USP6NL-201ENST00000277575 ARHGAP6O43182 974 aa12.55□□□□□ -0.4
USP6NL-201ENST00000277575 POLR2MP0CAP2 368 aa12.55□□□□□ -0.4
USP6NL-201ENST00000277575 MAGEA1P43355 309 aa12.55□□□□□ -0.4
USP6NL-201ENST00000277575 RASGRF1Q13972 1273 aa12.55□□□□□ -0.4
USP6NL-201ENST00000277575 EPHA10Q5JZY3 1008 aa12.55□□□□□ -0.4
USP6NL-201ENST00000277575 PPP1R14CQ8TAE6 165 aa12.55□□□□□ -0.4
USP6NL-201ENST00000277575 IFT81Q8WYA0 676 aa12.55□□□□□ -0.4
USP6NL-201ENST00000277575 TSNARE1Q96NA8 513 aa12.55□□□□□ -0.4
USP6NL-201ENST00000277575 CSRNP1Q96S65 589 aa12.55□□□□□ -0.4
USP6NL-201ENST00000277575 RNF26Q9BY78 433 aaPredicted RBP12.55□□□□□ -0.4
USP6NL-201ENST00000277575 KDM3AQ9Y4C1 1321 aa12.55□□□□□ -0.4
USP6NL-201ENST00000277575 DNM2P50570 870 aa12.54□□□□□ -0.4
USP6NL-201ENST00000277575 ASIC2Q16515 512 aa12.54□□□□□ -0.4
USP6NL-201ENST00000277575 GPATCH4Q5T3I0 446 aaKnown RBP12.54□□□□□ -0.4
USP6NL-201ENST00000277575 CC2D2BQ6DHV5 1058 aa12.54□□□□□ -0.4
USP6NL-201ENST00000277575 MIER3Q7Z3K6 550 aa12.54□□□□□ -0.4
USP6NL-201ENST00000277575 SULF1Q8IWU6 871 aa12.54□□□□□ -0.4
USP6NL-201ENST00000277575 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.54□□□□□ -0.4
USP6NL-201ENST00000277575 LRRC45Q96CN5 670 aa12.54□□□□□ -0.4
USP6NL-201ENST00000277575 IQCGQ9H095 443 aaKnown RBP12.54□□□□□ -0.4
USP6NL-201ENST00000277575 CLTCL1P53675 1640 aa12.54□□□□□ -0.4
USP6NL-201ENST00000277575 SPECC1LQ69YQ0 1117 aa12.54□□□□□ -0.4
USP6NL-201ENST00000277575 CHAMP1Q96JM3 812 aa12.54□□□□□ -0.4
USP6NL-201ENST00000277575 FLOT1O75955 427 aa12.54□□□□□ -0.4
USP6NL-201ENST00000277575 GPBP1Q86WP2 473 aa12.54□□□□□ -0.4
USP6NL-201ENST00000277575 CLIC6Q96NY7 704 aa12.54□□□□□ -0.4
USP6NL-201ENST00000277575 PCDHB13Q9Y5F0 798 aa12.54□□□□□ -0.4
USP6NL-201ENST00000277575 NCAPD2Q15021 1401 aa12.54□□□□□ -0.4
USP6NL-201ENST00000277575 OPA1O60313 960 aa12.54□□□□□ -0.4
USP6NL-201ENST00000277575 DIXDC1Q155Q3 683 aa12.54□□□□□ -0.4
USP6NL-201ENST00000277575 TRIM6Q9C030 488 aaPredicted RBP12.54□□□□□ -0.4
USP6NL-201ENST00000277575 XPO4Q9C0E2 1151 aaKnown RBP12.54□□□□□ -0.4
USP6NL-201ENST00000277575 MTX1Q13505 466 aa12.53□□□□□ -0.4
USP6NL-201ENST00000277575 GPIHBP1Q8IV16 184 aa12.53□□□□□ -0.4
USP6NL-201ENST00000277575 RDH13Q8NBN7 331 aa12.53□□□□□ -0.4
USP6NL-201ENST00000277575 NSUN7Q8NE18 718 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms