RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 TRMT1Q9NXH9 659 aaKnown RBP14.79□□□□□ -0.04
C9orf3-201ENST00000277198 HACL1Q9UJ83 578 aa14.79□□□□□ -0.04
C9orf3-201ENST00000277198 DENND2AQ9ULE3 1009 aa14.79□□□□□ -0.04
C9orf3-201ENST00000277198 ZBTB12Q9Y330 459 aaPredicted RBP14.79□□□□□ -0.04
C9orf3-201ENST00000277198 ECE2O60344 883 aa14.78□□□□□ -0.04
C9orf3-201ENST00000277198 MMP1P03956 469 aa14.78□□□□□ -0.04
C9orf3-201ENST00000277198 IGHMBP2P38935 993 aaKnown RBP14.78□□□□□ -0.04
C9orf3-201ENST00000277198 GMPSP49915 693 aaPredicted RBP14.78□□□□□ -0.04
C9orf3-201ENST00000277198 UBASH3AP57075 661 aa14.78□□□□□ -0.04
C9orf3-201ENST00000277198 NT5DC1Q5TFE4 455 aa14.78□□□□□ -0.04
C9orf3-201ENST00000277198 TXNRD3Q86VQ6 643 aa14.78□□□□□ -0.04
C9orf3-201ENST00000277198 ARID3AQ99856 593 aa14.78□□□□□ -0.04
C9orf3-201ENST00000277198 VPS33BQ9H267 617 aa14.78□□□□□ -0.04
C9orf3-201ENST00000277198 TMX1Q9H3N1 280 aa14.78□□□□□ -0.04
C9orf3-201ENST00000277198 EPB41L4AQ9HCS5 686 aaPredicted RBP14.78□□□□□ -0.04
C9orf3-201ENST00000277198 DACH1Q9UI36 760 aa14.78□□□□□ -0.04
C9orf3-201ENST00000277198 DDX41Q9UJV9 622 aaKnown RBP14.78□□□□□ -0.04
C9orf3-201ENST00000277198 ZNF215Q9UL58 517 aaPredicted RBP14.78□□□□□ -0.04
C9orf3-201ENST00000277198 ARAP2Q8WZ64 1704 aa14.78□□□□□ -0.04
C9orf3-201ENST00000277198 GSG1L2A8MUP6 293 aa14.78□□□□□ -0.04
C9orf3-201ENST00000277198 LMOD1P29536 600 aaPredicted RBP14.78□□□□□ -0.04
C9orf3-201ENST00000277198 CT47A1Q5JQC4 288 aaPredicted RBP14.78□□□□□ -0.04
C9orf3-201ENST00000277198 KANK3Q6NY19 840 aa14.78□□□□□ -0.04
C9orf3-201ENST00000277198 MAGEB6Q8N7X4 407 aa14.78□□□□□ -0.04
C9orf3-201ENST00000277198 TRIML1Q8N9V2 468 aa14.78□□□□□ -0.04
C9orf3-201ENST00000277198 SMC1BQ8NDV3 1235 aa14.78□□□□□ -0.04
C9orf3-201ENST00000277198 SLC26A6Q9BXS9 759 aa14.78□□□□□ -0.04
C9orf3-201ENST00000277198 PRDM4Q9UKN5 801 aa14.78□□□□□ -0.04
C9orf3-201ENST00000277198 CEP131Q9UPN4 1083 aa14.78□□□□□ -0.04
C9orf3-201ENST00000277198 SCN9AQ15858 1988 aa14.77□□□□□ -0.04
C9orf3-201ENST00000277198 ERICH2A1L162 156 aa14.77□□□□□ -0.04
C9orf3-201ENST00000277198 IQCA1LA6NCM1 817 aa14.77□□□□□ -0.04
C9orf3-201ENST00000277198 PSMD14O00487 310 aa14.77□□□□□ -0.04
C9orf3-201ENST00000277198 MBD4O95243 580 aa14.77□□□□□ -0.04
C9orf3-201ENST00000277198 DEXIO95424 95 aa14.77□□□□□ -0.04
C9orf3-201ENST00000277198 SERPINC1P01008 464 aa14.77□□□□□ -0.04
C9orf3-201ENST00000277198 PTPREP23469 700 aa14.77□□□□□ -0.04
C9orf3-201ENST00000277198 RASGRF1Q13972 1273 aa14.77□□□□□ -0.04
C9orf3-201ENST00000277198 CIAPIN1Q6FI81 312 aa14.77□□□□□ -0.04
C9orf3-201ENST00000277198 METTL16Q86W50 562 aaKnown RBP14.77□□□□□ -0.04
C9orf3-201ENST00000277198 PKNOX2Q96KN3 472 aa14.77□□□□□ -0.04
C9orf3-201ENST00000277198 MPHOSPH8Q99549 860 aa14.77□□□□□ -0.04
C9orf3-201ENST00000277198 SENP2Q9HC62 589 aa14.77□□□□□ -0.04
C9orf3-201ENST00000277198 RXRAP19793 462 aa14.76□□□□□ -0.05
C9orf3-201ENST00000277198 MDM2Q00987 491 aaPredicted RBP14.76□□□□□ -0.05
C9orf3-201ENST00000277198 CHRNDQ07001 517 aa14.76□□□□□ -0.05
C9orf3-201ENST00000277198 FSTL1Q12841 308 aa14.76□□□□□ -0.05
C9orf3-201ENST00000277198 RTN1Q16799 776 aa14.76□□□□□ -0.05
C9orf3-201ENST00000277198 LONRF3Q496Y0 759 aa14.76□□□□□ -0.05
C9orf3-201ENST00000277198 VSTM4Q8IW00 320 aa14.76□□□□□ -0.05
C9orf3-201ENST00000277198 MLKLQ8NB16 471 aa14.76□□□□□ -0.05
C9orf3-201ENST00000277198 NKX2-3Q8TAU0 364 aa14.76□□□□□ -0.05
C9orf3-201ENST00000277198 CCDC34Q96HJ3 373 aa14.76□□□□□ -0.05
C9orf3-201ENST00000277198 ZC3H12CQ9C0D7 883 aaKnown RBP14.76□□□□□ -0.05
C9orf3-201ENST00000277198 PHLPP2Q6ZVD8 1323 aa14.76□□□□□ -0.05
C9orf3-201ENST00000277198 PNOCQ13519 176 aa14.76□□□□□ -0.05
C9orf3-201ENST00000277198 WTAPQ15007 396 aa14.76□□□□□ -0.05
C9orf3-201ENST00000277198 EYA3Q99504 573 aa14.76□□□□□ -0.05
C9orf3-201ENST00000277198 SRRTQ9BXP5 876 aaKnown RBP14.76□□□□□ -0.05
C9orf3-201ENST00000277198 PCDHA5Q9Y5H7 936 aa14.76□□□□□ -0.05
C9orf3-201ENST00000277198 SCN4AP35499 1836 aa14.76□□□□□ -0.05
C9orf3-201ENST00000277198 ATP1A3P13637 1013 aa14.75□□□□□ -0.05
C9orf3-201ENST00000277198 ATP2B4P23634 1241 aa14.75□□□□□ -0.05
C9orf3-201ENST00000277198 ETF1P62495 437 aaKnown RBP14.75□□□□□ -0.05
C9orf3-201ENST00000277198 CFAP100Q494V2 611 aa14.75□□□□□ -0.05
C9orf3-201ENST00000277198 MAP1SQ66K74 1059 aaPredicted RBP14.75□□□□□ -0.05
C9orf3-201ENST00000277198 DIS3L2Q8IYB7 885 aaKnown RBP14.75□□□□□ -0.05
C9orf3-201ENST00000277198 CRACR2BQ8N4Y2 399 aaPredicted RBP14.75□□□□□ -0.05
C9orf3-201ENST00000277198 GPRC5DQ9NZD1 345 aa14.75□□□□□ -0.05
C9orf3-201ENST00000277198 GOLGA6L9A6NEM1 432 aa14.74□□□□□ -0.05
C9orf3-201ENST00000277198 ZSCAN12O43309 604 aa14.74□□□□□ -0.05
C9orf3-201ENST00000277198 EGFRP00533 1210 aa14.74□□□□□ -0.05
C9orf3-201ENST00000277198 TOP1P11387 765 aaKnown RBP14.74□□□□□ -0.05
C9orf3-201ENST00000277198 SARSP49591 514 aaKnown RBP14.74□□□□□ -0.05
C9orf3-201ENST00000277198 CHADLQ6NUI6 762 aa14.74□□□□□ -0.05
C9orf3-201ENST00000277198 FOXP4Q8IVH2 680 aaPredicted RBP14.74□□□□□ -0.05
C9orf3-201ENST00000277198 STK11IPQ8N1F8 1099 aa14.74□□□□□ -0.05
C9orf3-201ENST00000277198 ENOX1Q8TC92 643 aaKnown RBP14.74□□□□□ -0.05
C9orf3-201ENST00000277198 TRPM4Q8TD43 1214 aa14.74□□□□□ -0.05
C9orf3-201ENST00000277198 CLIC6Q96NY7 704 aa14.74□□□□□ -0.05
C9orf3-201ENST00000277198 MXD3Q9BW11 206 aa14.74□□□□□ -0.05
C9orf3-201ENST00000277198 ARMT1Q9H993 441 aa14.74□□□□□ -0.05
C9orf3-201ENST00000277198 ANAPC4Q9UJX5 808 aa14.74□□□□□ -0.05
C9orf3-201ENST00000277198 FBXO2Q9UK22 296 aaPredicted RBP14.74□□□□□ -0.05
C9orf3-201ENST00000277198 SRPRBQ9Y5M8 271 aaKnown RBP14.74□□□□□ -0.05
C9orf3-201ENST00000277198 ADAMTSL1Q8N6G6 1762 aa14.74□□□□□ -0.05
C9orf3-201ENST00000277198 BTBD18B2RXH4 712 aa14.74□□□□□ -0.05
C9orf3-201ENST00000277198 ARHGAP6O43182 974 aa14.74□□□□□ -0.05
C9orf3-201ENST00000277198 TDO2P48775 406 aa14.74□□□□□ -0.05
C9orf3-201ENST00000277198 TOB1P50616 345 aaPredicted RBP14.74□□□□□ -0.05
C9orf3-201ENST00000277198 CTDSPL2Q05D32 466 aa14.74□□□□□ -0.05
C9orf3-201ENST00000277198 GABPB1Q06547 395 aaPredicted RBP14.74□□□□□ -0.05
C9orf3-201ENST00000277198 FMR1Q06787 632 aaKnown RBP eCLIP14.74□□□□□ -0.05
C9orf3-201ENST00000277198 POSTNQ15063 836 aa14.74□□□□□ -0.05
C9orf3-201ENST00000277198 LDHDQ86WU2 507 aa14.74□□□□□ -0.05
C9orf3-201ENST00000277198 RNF26Q9BY78 433 aaPredicted RBP14.74□□□□□ -0.05
C9orf3-201ENST00000277198 CLEC11AQ9Y240 323 aa14.74□□□□□ -0.05
C9orf3-201ENST00000277198 ZNF804BA4D1E1 1349 aa14.74□□□□□ -0.05
C9orf3-201ENST00000277198 DOCK2Q92608 1830 aa14.73□□□□□ -0.05
C9orf3-201ENST00000277198 KIF20AO95235 890 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms