RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 ABCC10Q5T3U5 1492 aa13.17□□□□□ -0.3
SHPRH-201ENST00000275233 KCNQ4P56696 695 aa13.16□□□□□ -0.3
SHPRH-201ENST00000275233 CEP85LQ5SZL2 805 aa13.16□□□□□ -0.3
SHPRH-201ENST00000275233 CLRN2A0PK11 232 aa13.16□□□□□ -0.3
SHPRH-201ENST00000275233 MYCP01106 439 aaPredicted RBP13.16□□□□□ -0.3
SHPRH-201ENST00000275233 GLT8D2Q9H1C3 349 aa13.16□□□□□ -0.3
SHPRH-201ENST00000275233 SUGCTQ9HAC7 445 aa13.16□□□□□ -0.3
SHPRH-201ENST00000275233 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.16□□□□□ -0.3
SHPRH-201ENST00000275233 BCRP11274 1271 aa13.16□□□□□ -0.3
SHPRH-201ENST00000275233 ABCB4P21439 1286 aa13.16□□□□□ -0.3
SHPRH-201ENST00000275233 TRIM14Q14142 442 aa13.16□□□□□ -0.3
SHPRH-201ENST00000275233 OTUD6AQ7L8S5 288 aa13.16□□□□□ -0.3
SHPRH-201ENST00000275233 CARD6Q9BX69 1037 aa13.16□□□□□ -0.3
SHPRH-201ENST00000275233 CCDC105Q8IYK2 499 aa13.16□□□□□ -0.3
SHPRH-201ENST00000275233 SFMBT2Q5VUG0 894 aa13.16□□□□□ -0.3
SHPRH-201ENST00000275233 ZNF654Q8IZM8 581 aa13.16□□□□□ -0.3
SHPRH-201ENST00000275233 TAB3Q8N5C8 712 aaPredicted RBP13.16□□□□□ -0.3
SHPRH-201ENST00000275233 NFE2L3Q9Y4A8 694 aa13.16□□□□□ -0.3
SHPRH-201ENST00000275233 SYNJ2BP-COX16A0A087WUM0 186 aa13.15□□□□□ -0.3
SHPRH-201ENST00000275233 CHL1O00533 1208 aa13.15□□□□□ -0.3
SHPRH-201ENST00000275233 TBC1D8O95759 1140 aa13.15□□□□□ -0.3
SHPRH-201ENST00000275233 CERKLQ49MI3 558 aaPredicted RBP13.15□□□□□ -0.3
SHPRH-201ENST00000275233 LRRC24Q50LG9 513 aa13.15□□□□□ -0.3
SHPRH-201ENST00000275233 APOL6Q9BWW8 343 aa13.15□□□□□ -0.3
SHPRH-201ENST00000275233 COX16Q9P0S2 106 aa13.15□□□□□ -0.3
SHPRH-201ENST00000275233 SEPT10Q9P0V9 454 aa13.15□□□□□ -0.3
SHPRH-201ENST00000275233 GIPC1O14908 333 aa13.15□□□□□ -0.3
SHPRH-201ENST00000275233 ACTN4O43707 911 aaKnown RBP13.15□□□□□ -0.3
SHPRH-201ENST00000275233 BTDP43251 543 aa13.15□□□□□ -0.3
SHPRH-201ENST00000275233 TMCO4Q5TGY1 634 aa13.15□□□□□ -0.3
SHPRH-201ENST00000275233 CCDC89Q8N998 374 aa13.15□□□□□ -0.3
SHPRH-201ENST00000275233 PIK3C2GO75747 1445 aa13.15□□□□□ -0.3
SHPRH-201ENST00000275233 COBLO75128 1261 aa13.15□□□□□ -0.3
SHPRH-201ENST00000275233 ZNF131P52739 623 aa13.15□□□□□ -0.3
SHPRH-201ENST00000275233 SEPT14Q6ZU15 432 aa13.15□□□□□ -0.3
SHPRH-201ENST00000275233 GSDMBQ8TAX9 411 aa13.15□□□□□ -0.3
SHPRH-201ENST00000275233 MGARPQ8TDB4 240 aa13.15□□□□□ -0.3
SHPRH-201ENST00000275233 ZSCAN10Q96SZ4 725 aaPredicted RBP13.15□□□□□ -0.3
SHPRH-201ENST00000275233 PSTPIP2Q9H939 334 aa13.15□□□□□ -0.3
SHPRH-201ENST00000275233 AS3MTQ9HBK9 375 aa13.15□□□□□ -0.3
SHPRH-201ENST00000275233 CIB2O75838 187 aa13.15□□□□□ -0.3
SHPRH-201ENST00000275233 UBXN2AP68543 259 aa13.15□□□□□ -0.3
SHPRH-201ENST00000275233 ITKQ08881 620 aa13.15□□□□□ -0.3
SHPRH-201ENST00000275233 NAA25Q14CX7 972 aa13.15□□□□□ -0.3
SHPRH-201ENST00000275233 GKAP1Q5VSY0 366 aaPredicted RBP13.15□□□□□ -0.3
SHPRH-201ENST00000275233 DCPSQ96C86 337 aaKnown RBP13.15□□□□□ -0.3
SHPRH-201ENST00000275233 LZTS2Q9BRK4 669 aa13.15□□□□□ -0.3
SHPRH-201ENST00000275233 ARPP21Q9UBL0 812 aaPredicted RBP13.15□□□□□ -0.3
SHPRH-201ENST00000275233 MAGEA1P43355 309 aa13.15□□□□□ -0.3
SHPRH-201ENST00000275233 XKR9Q5GH70 373 aa13.15□□□□□ -0.3
SHPRH-201ENST00000275233 U2AF1L4Q8WU68 220 aaKnown RBP13.15□□□□□ -0.3
SHPRH-201ENST00000275233 SPDYE16A6NNV3 312 aaPredicted RBP13.14□□□□□ -0.31
SHPRH-201ENST00000275233 ATP5DP30049 168 aa13.14□□□□□ -0.31
SHPRH-201ENST00000275233 ADKP55263 362 aaKnown RBP13.14□□□□□ -0.31
SHPRH-201ENST00000275233 POLA2Q14181 598 aa13.14□□□□□ -0.31
SHPRH-201ENST00000275233 SPDYE2Q495Y8 402 aa13.14□□□□□ -0.31
SHPRH-201ENST00000275233 C4orf50Q6ZRC1 276 aa13.14□□□□□ -0.31
SHPRH-201ENST00000275233 SPICE1Q8N0Z3 855 aa13.14□□□□□ -0.31
SHPRH-201ENST00000275233 ANKRD35Q8N283 1001 aa13.14□□□□□ -0.31
SHPRH-201ENST00000275233 SPC25Q9HBM1 224 aa13.14□□□□□ -0.31
SHPRH-201ENST00000275233 TBC1D22AQ8WUA7 517 aa13.14□□□□□ -0.31
SHPRH-201ENST00000275233 LIG4P49917 911 aa13.14□□□□□ -0.31
SHPRH-201ENST00000275233 FYB2Q5VWT5 728 aa13.14□□□□□ -0.31
SHPRH-201ENST00000275233 DPY19L2Q6NUT2 758 aa13.14□□□□□ -0.31
SHPRH-201ENST00000275233 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.14□□□□□ -0.31
SHPRH-201ENST00000275233 STMN2Q93045 179 aa13.14□□□□□ -0.31
SHPRH-201ENST00000275233 NOL3O60936 208 aaKnown RBP13.14□□□□□ -0.31
SHPRH-201ENST00000275233 CUL4BQ13620 913 aa13.14□□□□□ -0.31
SHPRH-201ENST00000275233 USPL1Q5W0Q7 1092 aa13.14□□□□□ -0.31
SHPRH-201ENST00000275233 STIM2Q9P246 746 aa13.14□□□□□ -0.31
SHPRH-201ENST00000275233 ANKFY1Q9P2R3 1169 aa13.14□□□□□ -0.31
SHPRH-201ENST00000275233 K7ENM7 598 aa13.14□□□□□ -0.31
SHPRH-201ENST00000275233 MKRN3Q13064 507 aaKnown RBP13.14□□□□□ -0.31
SHPRH-201ENST00000275233 ME3Q16798 604 aa13.14□□□□□ -0.31
SHPRH-201ENST00000275233 CHURC1Q8WUH1 139 aa13.14□□□□□ -0.31
SHPRH-201ENST00000275233 NUP58Q9BVL2 599 aa13.14□□□□□ -0.31
SHPRH-201ENST00000275233 STK24Q9Y6E0 443 aa13.14□□□□□ -0.31
SHPRH-201ENST00000275233 TRIM37O94972 964 aa13.13□□□□□ -0.31
SHPRH-201ENST00000275233 DLATP10515 647 aaKnown RBP13.13□□□□□ -0.31
SHPRH-201ENST00000275233 KRT81Q14533 505 aa13.13□□□□□ -0.31
SHPRH-201ENST00000275233 PEX26Q7Z412 305 aa13.13□□□□□ -0.31
SHPRH-201ENST00000275233 RPUSD2Q8IZ73 545 aaKnown RBP13.13□□□□□ -0.31
SHPRH-201ENST00000275233 IFNL3Q8IZI9 196 aa13.13□□□□□ -0.31
SHPRH-201ENST00000275233 GDAP1L1Q96MZ0 367 aa13.13□□□□□ -0.31
SHPRH-201ENST00000275233 MKRN1Q9UHC7 482 aaKnown RBP13.13□□□□□ -0.31
SHPRH-201ENST00000275233 GTF2A1P52655 376 aaPredicted RBP13.13□□□□□ -0.31
SHPRH-201ENST00000275233 CHRNDQ07001 517 aa13.13□□□□□ -0.31
SHPRH-201ENST00000275233 ADAT2Q7Z6V5 191 aaKnown RBP13.13□□□□□ -0.31
SHPRH-201ENST00000275233 MLKLQ8NB16 471 aa13.13□□□□□ -0.31
SHPRH-201ENST00000275233 FLOT1O75955 427 aa13.13□□□□□ -0.31
SHPRH-201ENST00000275233 ZNF75DP51815 510 aa13.13□□□□□ -0.31
SHPRH-201ENST00000275233 Q3C1V9 767 aa13.13□□□□□ -0.31
SHPRH-201ENST00000275233 CAPN12Q6ZSI9 719 aa13.13□□□□□ -0.31
SHPRH-201ENST00000275233 CERS3Q8IU89 383 aa13.13□□□□□ -0.31
SHPRH-201ENST00000275233 A0A0D9SFI3 127 aa13.13□□□□□ -0.31
SHPRH-201ENST00000275233 PTH1RQ03431 593 aa13.13□□□□□ -0.31
SHPRH-201ENST00000275233 VPS37BQ9H9H4 285 aa13.13□□□□□ -0.31
SHPRH-201ENST00000275233 AFAP1L1Q8TED9 768 aa13.13□□□□□ -0.31
SHPRH-201ENST00000275233 POLR2MP0CAP2 368 aa13.13□□□□□ -0.31
SHPRH-201ENST00000275233 PANK4Q9NVE7 773 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms