RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 CYP27A1Q02318 531 aa14.56□□□□□ -0.08
COL8A1-202ENST00000273342 PPARAQ07869 468 aa14.56□□□□□ -0.08
COL8A1-202ENST00000273342 LCORLQ8N3X6 602 aa14.56□□□□□ -0.08
COL8A1-202ENST00000273342 SDR42E1Q8WUS8 393 aa14.56□□□□□ -0.08
COL8A1-202ENST00000273342 CTAGE1Q96RT6 745 aa14.56□□□□□ -0.08
COL8A1-202ENST00000273342 GBP3Q9H0R5 595 aa14.56□□□□□ -0.08
COL8A1-202ENST00000273342 JADE2Q9NQC1 790 aa14.56□□□□□ -0.08
COL8A1-202ENST00000273342 CEP131Q9UPN4 1083 aa14.56□□□□□ -0.08
COL8A1-202ENST00000273342 KCNJ18B7U540 433 aa14.56□□□□□ -0.08
COL8A1-202ENST00000273342 NDUFA10O95299 355 aa14.56□□□□□ -0.08
COL8A1-202ENST00000273342 CCT5P48643 541 aa14.56□□□□□ -0.08
COL8A1-202ENST00000273342 KCNJ12Q14500 433 aa14.56□□□□□ -0.08
COL8A1-202ENST00000273342 ZNF654Q8IZM8 581 aa14.56□□□□□ -0.08
COL8A1-202ENST00000273342 UBAC1Q9BSL1 405 aa14.56□□□□□ -0.08
COL8A1-202ENST00000273342 RIPOR2Q9Y4F9 1068 aa14.56□□□□□ -0.08
COL8A1-202ENST00000273342 CYP2D7A0A087X1C5 515 aa14.55□□□□□ -0.08
COL8A1-202ENST00000273342 ERCC3P19447 782 aa14.55□□□□□ -0.08
COL8A1-202ENST00000273342 MCM7P33993 719 aa14.55□□□□□ -0.08
COL8A1-202ENST00000273342 C2orf54Q08AI8 447 aa14.55□□□□□ -0.08
COL8A1-202ENST00000273342 PTGDRQ13258 359 aa14.55□□□□□ -0.08
COL8A1-202ENST00000273342 STIM1Q13586 685 aa14.55□□□□□ -0.08
COL8A1-202ENST00000273342 HLFQ16534 295 aa14.55□□□□□ -0.08
COL8A1-202ENST00000273342 SLC4A8Q2Y0W8 1093 aa14.55□□□□□ -0.08
COL8A1-202ENST00000273342 ICE2Q659A1 982 aa14.55□□□□□ -0.08
COL8A1-202ENST00000273342 KIAA1328Q86T90 577 aa14.55□□□□□ -0.08
COL8A1-202ENST00000273342 GPATCH11Q8N954 259 aa14.55□□□□□ -0.08
COL8A1-202ENST00000273342 IQUBQ8NA54 791 aa14.55□□□□□ -0.08
COL8A1-202ENST00000273342 SPATA20Q8TB22 786 aa14.55□□□□□ -0.08
COL8A1-202ENST00000273342 NELFBQ8WX92 580 aa14.55□□□□□ -0.08
COL8A1-202ENST00000273342 CRACR2AQ9BSW2 395 aa14.55□□□□□ -0.08
COL8A1-202ENST00000273342 ACBD3Q9H3P7 528 aa14.55□□□□□ -0.08
COL8A1-202ENST00000273342 EFCC1Q9HA90 598 aa14.55□□□□□ -0.08
COL8A1-202ENST00000273342 WDR19Q8NEZ3 1342 aa14.55□□□□□ -0.08
COL8A1-202ENST00000273342 PATL2C9JE40 543 aaKnown RBP14.55□□□□□ -0.08
COL8A1-202ENST00000273342 PLEKHA8P1O95397 391 aa14.55□□□□□ -0.08
COL8A1-202ENST00000273342 LIFRP42702 1097 aa14.55□□□□□ -0.08
COL8A1-202ENST00000273342 RASSF8Q8NHQ8 419 aa14.55□□□□□ -0.08
COL8A1-202ENST00000273342 SMCR8Q8TEV9 937 aaPredicted RBP14.55□□□□□ -0.08
COL8A1-202ENST00000273342 PCMTD1Q96MG8 357 aaPredicted RBP14.55□□□□□ -0.08
COL8A1-202ENST00000273342 ARHGAP23Q9P227 1491 aa14.55□□□□□ -0.08
COL8A1-202ENST00000273342 GSG1L2A8MUP6 293 aa14.55□□□□□ -0.08
COL8A1-202ENST00000273342 AMPD2Q01433 879 aa14.55□□□□□ -0.08
COL8A1-202ENST00000273342 EZH2Q15910 746 aaKnown RBP14.55□□□□□ -0.08
COL8A1-202ENST00000273342 SMARCAL1Q9NZC9 954 aa14.55□□□□□ -0.08
COL8A1-202ENST00000273342 HPCAL4Q9UM19 191 aa14.55□□□□□ -0.08
COL8A1-202ENST00000273342 SAR1BQ9Y6B6 198 aa14.55□□□□□ -0.08
COL8A1-202ENST00000273342 KLK7P49862 253 aa14.54□□□□□ -0.08
COL8A1-202ENST00000273342 TTF1Q15361 905 aaPredicted RBP14.54□□□□□ -0.08
COL8A1-202ENST00000273342 UBE3CQ15386 1083 aa14.54□□□□□ -0.08
COL8A1-202ENST00000273342 SAMM50Q9Y512 469 aa14.54□□□□□ -0.08
COL8A1-202ENST00000273342 XDHP47989 1333 aa14.54□□□□□ -0.08
COL8A1-202ENST00000273342 ADAMTS3O15072 1205 aa14.54□□□□□ -0.08
COL8A1-202ENST00000273342 USP14P54578 494 aa14.54□□□□□ -0.08
COL8A1-202ENST00000273342 EVA1CP58658 441 aa14.54□□□□□ -0.08
COL8A1-202ENST00000273342 SLC7A5Q01650 507 aa14.54□□□□□ -0.08
COL8A1-202ENST00000273342 LACRTQ9GZZ8 138 aa14.54□□□□□ -0.08
COL8A1-202ENST00000273342 KAT14Q9H8E8 782 aa14.54□□□□□ -0.08
COL8A1-202ENST00000273342 MTMR7Q9Y216 660 aa14.54□□□□□ -0.08
COL8A1-202ENST00000273342 MYH8P13535 1937 aa14.53□□□□□ -0.08
COL8A1-202ENST00000273342 RCCD1A6NED2 376 aa14.53□□□□□ -0.08
COL8A1-202ENST00000273342 PDE2AO00408 941 aaPredicted RBP14.53□□□□□ -0.08
COL8A1-202ENST00000273342 DNA2P51530 1060 aa14.53□□□□□ -0.08
COL8A1-202ENST00000273342 PAK1Q13153 545 aa14.53□□□□□ -0.08
COL8A1-202ENST00000273342 TCP11X2Q5H9J9 407 aa14.53□□□□□ -0.08
COL8A1-202ENST00000273342 ZNF579Q8NAF0 562 aaKnown RBP14.53□□□□□ -0.08
COL8A1-202ENST00000273342 HDAC7Q8WUI4 952 aa14.53□□□□□ -0.08
COL8A1-202ENST00000273342 JAKMIP2Q96AA8 810 aa14.53□□□□□ -0.08
COL8A1-202ENST00000273342 MTRQ99707 1265 aa14.53□□□□□ -0.08
COL8A1-202ENST00000273342 RGPD5Q99666 1765 aa14.53□□□□□ -0.08
COL8A1-202ENST00000273342 ARFGEF2Q9Y6D5 1785 aa14.53□□□□□ -0.08
COL8A1-202ENST00000273342 KIF13AQ9H1H9 1805 aa14.53□□□□□ -0.08
COL8A1-202ENST00000273342 TCRBV5S4A2TA0A5A2 114 aa14.53□□□□□ -0.08
COL8A1-202ENST00000273342 ANKRD18BA2A2Z9 1011 aa14.53□□□□□ -0.08
COL8A1-202ENST00000273342 VEGFAP15692 232 aaPredicted RBP14.53□□□□□ -0.08
COL8A1-202ENST00000273342 CXCR5P32302 372 aa14.53□□□□□ -0.08
COL8A1-202ENST00000273342 CORO7P57737 925 aa14.53□□□□□ -0.08
COL8A1-202ENST00000273342 KCTD19Q17RG1 926 aaPredicted RBP14.53□□□□□ -0.08
COL8A1-202ENST00000273342 PIK3AP1Q6ZUJ8 805 aa14.53□□□□□ -0.08
COL8A1-202ENST00000273342 ANKRD20A12PQ8NF67 263 aa14.53□□□□□ -0.08
COL8A1-202ENST00000273342 GSDMAQ96QA5 445 aa14.53□□□□□ -0.08
COL8A1-202ENST00000273342 MED4Q9NPJ6 270 aa14.53□□□□□ -0.08
COL8A1-202ENST00000273342 AATFQ9NY61 560 aaKnown RBP eCLIP14.53□□□□□ -0.08
COL8A1-202ENST00000273342 ABCF2Q9UG63 623 aa14.53□□□□□ -0.08
COL8A1-202ENST00000273342 MKRN1Q9UHC7 482 aaKnown RBP14.53□□□□□ -0.08
COL8A1-202ENST00000273342 C4AP0C0L4 1744 aa14.53□□□□□ -0.08
COL8A1-202ENST00000273342 C4BP0C0L5 1744 aa14.53□□□□□ -0.08
COL8A1-202ENST00000273342 PPFIA4O75335 1185 aa14.52□□□□□ -0.08
COL8A1-202ENST00000273342 PRCPP42785 496 aa14.52□□□□□ -0.08
COL8A1-202ENST00000273342 PMS1P54277 932 aaKnown RBP14.52□□□□□ -0.08
COL8A1-202ENST00000273342 RASGRF1Q13972 1273 aa14.52□□□□□ -0.08
COL8A1-202ENST00000273342 TSR1Q2NL82 804 aaKnown RBP14.52□□□□□ -0.08
COL8A1-202ENST00000273342 DNAJC10Q8IXB1 793 aa14.52□□□□□ -0.08
COL8A1-202ENST00000273342 SPATA5Q8NB90 893 aa14.52□□□□□ -0.08
COL8A1-202ENST00000273342 RRP36Q96EU6 259 aaKnown RBP14.52□□□□□ -0.08
COL8A1-202ENST00000273342 ISCA1Q9BUE6 129 aa14.52□□□□□ -0.08
COL8A1-202ENST00000273342 SELENOOQ9BVL4 669 aa14.52□□□□□ -0.08
COL8A1-202ENST00000273342 AGPAT5Q9NUQ2 364 aa14.52□□□□□ -0.08
COL8A1-202ENST00000273342 EHD2Q9NZN4 543 aa14.52□□□□□ -0.08
COL8A1-202ENST00000273342 TRMT112Q9UI30 125 aaKnown RBP14.52□□□□□ -0.08
COL8A1-202ENST00000273342 LUC7L2Q9Y383 392 aaKnown RBP14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms