RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 PRDM10Q9NQV6 1147 aa12.57□□□□□ -0.4
LRTM1-201ENST00000273286 MYBBP1AQ9BQG0 1328 aaKnown RBP12.57□□□□□ -0.4
LRTM1-201ENST00000273286 CDHR2Q9BYE9 1310 aa12.57□□□□□ -0.4
LRTM1-201ENST00000273286 PPIP5K2O43314 1243 aa12.56□□□□□ -0.4
LRTM1-201ENST00000273286 MICAL2O94851 1124 aa12.56□□□□□ -0.4
LRTM1-201ENST00000273286 CTCFP49711 727 aaPredicted RBP12.56□□□□□ -0.4
LRTM1-201ENST00000273286 MAP2K1Q02750 393 aaPredicted RBP12.56□□□□□ -0.4
LRTM1-201ENST00000273286 SWI5Q1ZZU3 235 aa12.56□□□□□ -0.4
LRTM1-201ENST00000273286 DEFB115Q30KQ5 88 aa12.56□□□□□ -0.4
LRTM1-201ENST00000273286 NUDT8Q8WV74 236 aa12.56□□□□□ -0.4
LRTM1-201ENST00000273286 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.56□□□□□ -0.4
LRTM1-201ENST00000273286 DDX21Q9NR30 783 aaKnown RBP eCLIP12.56□□□□□ -0.4
LRTM1-201ENST00000273286 TRIM28Q13263 835 aaKnown RBP12.55□□□□□ -0.4
LRTM1-201ENST00000273286 MAP1SQ66K74 1059 aaPredicted RBP12.55□□□□□ -0.4
LRTM1-201ENST00000273286 KRT25Q7Z3Z0 450 aa12.55□□□□□ -0.4
LRTM1-201ENST00000273286 RTFDC1Q9BY42 306 aaPredicted RBP12.55□□□□□ -0.4
LRTM1-201ENST00000273286 NAGPAQ9UK23 515 aa12.55□□□□□ -0.4
LRTM1-201ENST00000273286 LRFN2Q9ULH4 789 aa12.55□□□□□ -0.4
LRTM1-201ENST00000273286 SH3TC1Q8TE82 1336 aa12.55□□□□□ -0.4
LRTM1-201ENST00000273286 ANKRD36CQ5JPF3 1778 aa12.55□□□□□ -0.4
LRTM1-201ENST00000273286 ABCC4O15439 1325 aa12.54□□□□□ -0.4
LRTM1-201ENST00000273286 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.54□□□□□ -0.4
LRTM1-201ENST00000273286 CHL1O00533 1208 aa12.54□□□□□ -0.4
LRTM1-201ENST00000273286 PRMT3O60678 531 aa12.54□□□□□ -0.4
LRTM1-201ENST00000273286 ECE1P42892 770 aa12.54□□□□□ -0.4
LRTM1-201ENST00000273286 TCIRG1Q13488 830 aa12.54□□□□□ -0.4
LRTM1-201ENST00000273286 WDR43Q15061 677 aaKnown RBP eCLIP12.54□□□□□ -0.4
LRTM1-201ENST00000273286 PSAPL1Q6NUJ1 521 aa12.54□□□□□ -0.4
LRTM1-201ENST00000273286 DPP8Q6V1X1 898 aaPredicted RBP12.54□□□□□ -0.4
LRTM1-201ENST00000273286 DDX46Q7L014 1031 aaKnown RBP12.54□□□□□ -0.4
LRTM1-201ENST00000273286 COPS6Q7L5N1 327 aa12.54□□□□□ -0.4
LRTM1-201ENST00000273286 NLRP10Q86W26 655 aa12.54□□□□□ -0.4
LRTM1-201ENST00000273286 SP8Q8IXZ3 490 aa12.54□□□□□ -0.4
LRTM1-201ENST00000273286 STK32AQ8WU08 396 aa12.54□□□□□ -0.4
LRTM1-201ENST00000273286 TRMT112Q9UI30 125 aaKnown RBP12.54□□□□□ -0.4
LRTM1-201ENST00000273286 ZNRF3Q9ULT6 936 aa12.54□□□□□ -0.4
LRTM1-201ENST00000273286 GATA4P43694 442 aa12.54□□□□□ -0.4
LRTM1-201ENST00000273286 ELOAQ14241 798 aaKnown RBP12.54□□□□□ -0.4
LRTM1-201ENST00000273286 AOC3Q16853 763 aa12.54□□□□□ -0.4
LRTM1-201ENST00000273286 XAGE3Q8WTP9 111 aa12.54□□□□□ -0.4
LRTM1-201ENST00000273286 RUNDC1Q96C34 613 aa12.54□□□□□ -0.4
LRTM1-201ENST00000273286 IFT43Q96FT9 208 aa12.54□□□□□ -0.4
LRTM1-201ENST00000273286 ADARB2Q9NS39 739 aaKnown RBP12.54□□□□□ -0.4
LRTM1-201ENST00000273286 GPRC5DQ9NZD1 345 aa12.54□□□□□ -0.4
LRTM1-201ENST00000273286 DBF4Q9UBU7 674 aaPredicted RBP12.54□□□□□ -0.4
LRTM1-201ENST00000273286 ABT1Q9ULW3 272 aaKnown RBP12.54□□□□□ -0.4
LRTM1-201ENST00000273286 COL4A5P29400 1685 aa12.53□□□□□ -0.4
LRTM1-201ENST00000273286 TCERG1O14776 1098 aaKnown RBP12.53□□□□□ -0.4
LRTM1-201ENST00000273286 FOXN1O15353 648 aa12.53□□□□□ -0.4
LRTM1-201ENST00000273286 EPS15P42566 896 aa12.53□□□□□ -0.4
LRTM1-201ENST00000273286 KIAA2012Q0VF49 1180 aa12.53□□□□□ -0.4
LRTM1-201ENST00000273286 AIMP1Q12904 312 aaKnown RBP12.53□□□□□ -0.4
LRTM1-201ENST00000273286 GRAPQ13588 217 aa12.53□□□□□ -0.4
LRTM1-201ENST00000273286 TNIP1Q15025 636 aa12.53□□□□□ -0.4
LRTM1-201ENST00000273286 PROSER3Q2NL68 480 aa12.53□□□□□ -0.4
LRTM1-201ENST00000273286 PLBD2Q8NHP8 589 aa12.53□□□□□ -0.4
LRTM1-201ENST00000273286 GRAPLQ8TC17 118 aaPredicted RBP12.53□□□□□ -0.4
LRTM1-201ENST00000273286 CHMP4AQ9BY43 222 aa12.53□□□□□ -0.4
LRTM1-201ENST00000273286 WDR33Q9C0J8 1336 aaKnown RBP12.52□□□□□ -0.41
LRTM1-201ENST00000273286 HSP90B1P14625 803 aaKnown RBP12.52□□□□□ -0.41
LRTM1-201ENST00000273286 DOC2BQ14184 412 aa12.52□□□□□ -0.41
LRTM1-201ENST00000273286 CIAPIN1Q6FI81 312 aa12.52□□□□□ -0.41
LRTM1-201ENST00000273286 HYPKQ9NX55 129 aa12.52□□□□□ -0.41
LRTM1-201ENST00000273286 ZFATQ9P243 1243 aa12.52□□□□□ -0.41
LRTM1-201ENST00000273286 LTBP1Q14766 1721 aa12.51□□□□□ -0.41
LRTM1-201ENST00000273286 MAP3K6O95382 1288 aa12.51□□□□□ -0.41
LRTM1-201ENST00000273286 ANXA1P04083 346 aa12.51□□□□□ -0.41
LRTM1-201ENST00000273286 RARAP10276 462 aa12.51□□□□□ -0.41
LRTM1-201ENST00000273286 CALD1Q05682 793 aaKnown RBP12.51□□□□□ -0.41
LRTM1-201ENST00000273286 CXCL9Q07325 125 aa12.51□□□□□ -0.41
LRTM1-201ENST00000273286 OCLNQ16625 522 aa12.51□□□□□ -0.41
LRTM1-201ENST00000273286 USP20Q9Y2K6 914 aa12.51□□□□□ -0.41
LRTM1-201ENST00000273286 HCLS1P14317 486 aaPredicted RBP12.5□□□□□ -0.41
LRTM1-201ENST00000273286 TARSP26639 723 aaKnown RBP12.5□□□□□ -0.41
LRTM1-201ENST00000273286 GRIK4Q16099 956 aa12.5□□□□□ -0.41
LRTM1-201ENST00000273286 COX20Q5RI15 118 aa12.5□□□□□ -0.41
LRTM1-201ENST00000273286 FAM35AQ86V20 835 aa12.5□□□□□ -0.41
LRTM1-201ENST00000273286 TREML1Q86YW5 311 aa12.5□□□□□ -0.41
LRTM1-201ENST00000273286 HHIPL1Q96JK4 782 aa12.5□□□□□ -0.41
LRTM1-201ENST00000273286 NACC1Q96RE7 527 aa12.5□□□□□ -0.41
LRTM1-201ENST00000273286 ZMYND15Q9H091 742 aa12.5□□□□□ -0.41
LRTM1-201ENST00000273286 CHPF2Q9P2E5 772 aa12.5□□□□□ -0.41
LRTM1-201ENST00000273286 TRPM7Q96QT4 1865 aa12.5□□□□□ -0.41
LRTM1-201ENST00000273286 LAMB2P55268 1798 aa12.49□□□□□ -0.41
LRTM1-201ENST00000273286 RGS9O75916 674 aaPredicted RBP12.49□□□□□ -0.41
LRTM1-201ENST00000273286 SASH3O75995 380 aa12.49□□□□□ -0.41
LRTM1-201ENST00000273286 CPB1P15086 417 aa12.49□□□□□ -0.41
LRTM1-201ENST00000273286 SF3B3Q15393 1217 aaKnown RBP12.49□□□□□ -0.41
LRTM1-201ENST00000273286 PCSK7Q16549 785 aa12.49□□□□□ -0.41
LRTM1-201ENST00000273286 DHX32Q7L7V1 743 aaKnown RBP12.49□□□□□ -0.41
LRTM1-201ENST00000273286 BCL2L13Q9BXK5 485 aa12.49□□□□□ -0.41
LRTM1-201ENST00000273286 PGAP2Q9UHJ9 254 aa12.49□□□□□ -0.41
LRTM1-201ENST00000273286 LAS1LQ9Y4W2 734 aaKnown RBP12.49□□□□□ -0.41
LRTM1-201ENST00000273286 THSD7BQ9C0I4 1608 aa12.49□□□□□ -0.41
LRTM1-201ENST00000273286 LRRC37AA6NMS7 1700 aa12.49□□□□□ -0.41
LRTM1-201ENST00000273286 H7C1D1 291 aa12.48□□□□□ -0.41
LRTM1-201ENST00000273286 OPLAHO14841 1288 aa12.48□□□□□ -0.41
LRTM1-201ENST00000273286 MAP2K2P36507 400 aa12.48□□□□□ -0.41
LRTM1-201ENST00000273286 GMPSP49915 693 aaPredicted RBP12.48□□□□□ -0.41
LRTM1-201ENST00000273286 AFF1P51825 1210 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms