RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 FOXP1Q9H334 677 aaPredicted RBP14.17□□□□□ -0.14
UBXN4-201ENST00000272638 DCP1AQ9NPI6 582 aaPredicted RBP14.17□□□□□ -0.14
UBXN4-201ENST00000272638 BMP2KQ9NSY1 1161 aaPredicted RBP14.17□□□□□ -0.14
UBXN4-201ENST00000272638 BSDC1Q9NW68 430 aaPredicted RBP14.17□□□□□ -0.14
UBXN4-201ENST00000272638 MYO1BO43795 1136 aa14.17□□□□□ -0.14
UBXN4-201ENST00000272638 NTSR2O95665 410 aa14.17□□□□□ -0.14
UBXN4-201ENST00000272638 STAG2Q8N3U4 1231 aa14.17□□□□□ -0.14
UBXN4-201ENST00000272638 WDR66Q8TBY9 1149 aa14.17□□□□□ -0.14
UBXN4-201ENST00000272638 NBPF3Q9H094 633 aa14.17□□□□□ -0.14
UBXN4-201ENST00000272638 IMPACTQ9P2X3 320 aa14.17□□□□□ -0.14
UBXN4-201ENST00000272638 GNAQP50148 359 aa14.16□□□□□ -0.14
UBXN4-201ENST00000272638 GPS2Q13227 327 aa14.16□□□□□ -0.14
UBXN4-201ENST00000272638 TCERG1LQ5VWI1 586 aa14.16□□□□□ -0.14
UBXN4-201ENST00000272638 RESP18Q5W5W9 173 aa14.16□□□□□ -0.14
UBXN4-201ENST00000272638 C6orf50Q9HD87 102 aa14.16□□□□□ -0.14
UBXN4-201ENST00000272638 CAMTA1Q9Y6Y1 1673 aa14.16□□□□□ -0.14
UBXN4-201ENST00000272638 SMCO2A6NFE2 343 aa14.16□□□□□ -0.14
UBXN4-201ENST00000272638 TMEM266Q2M3C6 531 aa14.16□□□□□ -0.14
UBXN4-201ENST00000272638 CLEC10AQ8IUN9 316 aa14.16□□□□□ -0.14
UBXN4-201ENST00000272638 ARHGEF1Q92888 912 aaKnown RBP14.16□□□□□ -0.14
UBXN4-201ENST00000272638 TCEAL9Q9UHQ7 104 aa14.16□□□□□ -0.14
UBXN4-201ENST00000272638 PTPREP23469 700 aa14.16□□□□□ -0.14
UBXN4-201ENST00000272638 NFIXQ14938 502 aa14.16□□□□□ -0.14
UBXN4-201ENST00000272638 CCDC43Q96MW1 224 aaKnown RBP14.16□□□□□ -0.14
UBXN4-201ENST00000272638 SRRTQ9BXP5 876 aaKnown RBP14.16□□□□□ -0.14
UBXN4-201ENST00000272638 JADE2Q9NQC1 790 aa14.16□□□□□ -0.14
UBXN4-201ENST00000272638 GDAQ9Y2T3 454 aa14.16□□□□□ -0.14
UBXN4-201ENST00000272638 COL5A2P05997 1499 aaPredicted RBP14.16□□□□□ -0.14
UBXN4-201ENST00000272638 FOXP2O15409 715 aa14.15□□□□□ -0.14
UBXN4-201ENST00000272638 TEX33O43247 280 aa14.15□□□□□ -0.14
UBXN4-201ENST00000272638 CACNB3P54284 484 aa14.15□□□□□ -0.14
UBXN4-201ENST00000272638 PPARDQ03181 441 aa14.15□□□□□ -0.14
UBXN4-201ENST00000272638 FMR1Q06787 632 aaKnown RBP eCLIP14.15□□□□□ -0.142e-11■□□□□ 10.8
UBXN4-201ENST00000272638 PAK1Q13153 545 aa14.15□□□□□ -0.14
UBXN4-201ENST00000272638 CCDC40Q4G0X9 1142 aa14.15□□□□□ -0.14
UBXN4-201ENST00000272638 WWC2Q6AWC2 1192 aa14.15□□□□□ -0.14
UBXN4-201ENST00000272638 SGMS1Q86VZ5 419 aa14.15□□□□□ -0.14
UBXN4-201ENST00000272638 SPTLC3Q9NUV7 552 aa14.15□□□□□ -0.14
UBXN4-201ENST00000272638 PPP2R2CQ9Y2T4 447 aa14.15□□□□□ -0.14
UBXN4-201ENST00000272638 CASP14P31944 242 aa14.15□□□□□ -0.14
UBXN4-201ENST00000272638 GTF2F1P35269 517 aaKnown RBP eCLIP14.15□□□□□ -0.14
UBXN4-201ENST00000272638 ETF1P62495 437 aaKnown RBP14.15□□□□□ -0.14
UBXN4-201ENST00000272638 ERO1AQ96HE7 468 aa14.15□□□□□ -0.14
UBXN4-201ENST00000272638 GDAP1L1Q96MZ0 367 aa14.15□□□□□ -0.14
UBXN4-201ENST00000272638 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.15□□□□□ -0.14
UBXN4-201ENST00000272638 MACROD2A1Z1Q3 448 aa14.15□□□□□ -0.14
UBXN4-201ENST00000272638 SOWAHDA6NJG2 315 aa14.15□□□□□ -0.14
UBXN4-201ENST00000272638 FAM196BA6NMK8 535 aa14.15□□□□□ -0.14
UBXN4-201ENST00000272638 SLC16A2P36021 539 aa14.15□□□□□ -0.14
UBXN4-201ENST00000272638 ZYXQ15942 572 aaKnown RBP14.15□□□□□ -0.14
UBXN4-201ENST00000272638 KIAA0825Q8IV33 1275 aa14.15□□□□□ -0.14
UBXN4-201ENST00000272638 ZNF397Q8NF99 534 aaPredicted RBP14.15□□□□□ -0.14
UBXN4-201ENST00000272638 IRX2Q9BZI1 471 aaPredicted RBP14.15□□□□□ -0.14
UBXN4-201ENST00000272638 ARPP21Q9UBL0 812 aaPredicted RBP14.15□□□□□ -0.14
UBXN4-201ENST00000272638 CTDP1Q9Y5B0 961 aaPredicted RBP14.15□□□□□ -0.14
UBXN4-201ENST00000272638 RGPD2P0DJD1 1756 aa14.14□□□□□ -0.15
UBXN4-201ENST00000272638 ARHGAP6O43182 974 aa14.14□□□□□ -0.15
UBXN4-201ENST00000272638 NCBP1Q09161 790 aaKnown RBP14.14□□□□□ -0.15
UBXN4-201ENST00000272638 SRBD1Q8N5C6 995 aaKnown RBP14.14□□□□□ -0.15
UBXN4-201ENST00000272638 CSGALNACT2Q8N6G5 542 aa14.14□□□□□ -0.15
UBXN4-201ENST00000272638 PLEKHA4Q9H4M7 779 aa14.14□□□□□ -0.15
UBXN4-201ENST00000272638 SEPT11Q9NVA2 429 aaKnown RBP14.14□□□□□ -0.15
UBXN4-201ENST00000272638 AKR1B10O60218 316 aa14.14□□□□□ -0.15
UBXN4-201ENST00000272638 TBC1D8BQ0IIM8 1120 aa14.14□□□□□ -0.15
UBXN4-201ENST00000272638 MTF1Q14872 753 aa14.14□□□□□ -0.15
UBXN4-201ENST00000272638 COA7Q96BR5 231 aa14.14□□□□□ -0.15
UBXN4-201ENST00000272638 AGXT2Q9BYV1 514 aa14.14□□□□□ -0.15
UBXN4-201ENST00000272638 TRIM37O94972 964 aa14.14□□□□□ -0.15
UBXN4-201ENST00000272638 SPA17Q15506 151 aa14.14□□□□□ -0.15
UBXN4-201ENST00000272638 CCDC181Q5TID7 509 aa14.14□□□□□ -0.15
UBXN4-201ENST00000272638 KRT222Q8N1A0 295 aa14.14□□□□□ -0.15
UBXN4-201ENST00000272638 RMND1Q9NWS8 449 aa14.14□□□□□ -0.15
UBXN4-201ENST00000272638 TTF2Q9UNY4 1162 aaKnown RBP14.14□□□□□ -0.15
UBXN4-201ENST00000272638 SRPRBQ9Y5M8 271 aaKnown RBP14.14□□□□□ -0.15
UBXN4-201ENST00000272638 ABCC12Q96J65 1359 aa14.14□□□□□ -0.15
UBXN4-201ENST00000272638 FMN2Q9NZ56 1722 aa14.14□□□□□ -0.15
UBXN4-201ENST00000272638 CCDC70Q6NSX1 233 aa14.13□□□□□ -0.15
UBXN4-201ENST00000272638 FERMT2Q96AC1 680 aa14.13□□□□□ -0.15
UBXN4-201ENST00000272638 IL17RAQ96F46 866 aa14.13□□□□□ -0.15
UBXN4-201ENST00000272638 CTAGE1Q96RT6 745 aa14.13□□□□□ -0.15
UBXN4-201ENST00000272638 LUC7L2Q9Y383 392 aaKnown RBP14.13□□□□□ -0.15
UBXN4-201ENST00000272638 CUL4BQ13620 913 aa14.13□□□□□ -0.15
UBXN4-201ENST00000272638 SARM1Q6SZW1 724 aa14.13□□□□□ -0.15
UBXN4-201ENST00000272638 DPP8Q6V1X1 898 aaPredicted RBP14.13□□□□□ -0.15
UBXN4-201ENST00000272638 RASGRP2Q7LDG7 609 aa14.13□□□□□ -0.15
UBXN4-201ENST00000272638 PAGE5Q96GU1 130 aa14.13□□□□□ -0.15
UBXN4-201ENST00000272638 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.13□□□□□ -0.153e-7■■■■■ 26.8
UBXN4-201ENST00000272638 TRIM49BA6NDI0 452 aa14.13□□□□□ -0.15
UBXN4-201ENST00000272638 PPP2R3AQ06190 1150 aa14.13□□□□□ -0.15
UBXN4-201ENST00000272638 RBL2Q08999 1139 aa14.13□□□□□ -0.15
UBXN4-201ENST00000272638 HLA-DOAP06340 250 aa14.12□□□□□ -0.15
UBXN4-201ENST00000272638 CCZ1BP86790 482 aa14.12□□□□□ -0.15
UBXN4-201ENST00000272638 CCZ1P86791 482 aaPredicted RBP14.12□□□□□ -0.15
UBXN4-201ENST00000272638 USH1GQ495M9 461 aa14.12□□□□□ -0.15
UBXN4-201ENST00000272638 EARS2Q5JPH6 523 aaKnown RBP14.12□□□□□ -0.15
UBXN4-201ENST00000272638 TMTC3Q6ZXV5 915 aa14.12□□□□□ -0.15
UBXN4-201ENST00000272638 SLC51AQ86UW1 340 aa14.12□□□□□ -0.15
UBXN4-201ENST00000272638 FCHSD1Q86WN1 690 aa14.12□□□□□ -0.15
UBXN4-201ENST00000272638 SLF2Q8IX21 1173 aa14.12□□□□□ -0.15
UBXN4-201ENST00000272638 NELFCDQ8IXH7 590 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms