RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 GRIPAP1Q4V328 841 aa13.45□□□□□ -0.26
ERBB2-201ENST00000269571 SYCP3Q8IZU3 236 aa13.45□□□□□ -0.26
ERBB2-201ENST00000269571 TTC14Q96N46 770 aa13.45□□□□□ -0.26
ERBB2-201ENST00000269571 NSRP1Q9H0G5 558 aaKnown RBP13.45□□□□□ -0.26
ERBB2-201ENST00000269571 PRAMEF22A3QJZ6 481 aa13.45□□□□□ -0.26
ERBB2-201ENST00000269571 ST5P78524 1137 aa13.45□□□□□ -0.26
ERBB2-201ENST00000269571 CASP8Q14790 479 aa13.45□□□□□ -0.26
ERBB2-201ENST00000269571 FAM98CQ17RN3 349 aaKnown RBP13.45□□□□□ -0.26
ERBB2-201ENST00000269571 CC2D1AQ6P1N0 951 aaPredicted RBP13.45□□□□□ -0.26
ERBB2-201ENST00000269571 SPATS2Q86XZ4 545 aaKnown RBP13.45□□□□□ -0.26
ERBB2-201ENST00000269571 KSR1Q8IVT5 923 aa13.45□□□□□ -0.26
ERBB2-201ENST00000269571 TBC1D31Q96DN5 1066 aa13.45□□□□□ -0.26
ERBB2-201ENST00000269571 IFIH1Q9BYX4 1025 aaKnown RBP13.45□□□□□ -0.26
ERBB2-201ENST00000269571 DONSONQ9NYP3 566 aa13.45□□□□□ -0.26
ERBB2-201ENST00000269571 NEURL1BA8MQ27 555 aa13.45□□□□□ -0.26
ERBB2-201ENST00000269571 CETN2P41208 172 aa13.45□□□□□ -0.26
ERBB2-201ENST00000269571 SLC39A14Q15043 492 aa13.45□□□□□ -0.26
ERBB2-201ENST00000269571 NOSTRINQ8IVI9 506 aa13.45□□□□□ -0.26
ERBB2-201ENST00000269571 RNF168Q8IYW5 571 aaPredicted RBP13.45□□□□□ -0.26
ERBB2-201ENST00000269571 SWAP70Q9UH65 585 aa13.45□□□□□ -0.26
ERBB2-201ENST00000269571 ARAP3Q8WWN8 1544 aa13.45□□□□□ -0.26
ERBB2-201ENST00000269571 TRIM14Q14142 442 aa13.45□□□□□ -0.26
ERBB2-201ENST00000269571 ARMC2Q8NEN0 867 aa13.45□□□□□ -0.26
ERBB2-201ENST00000269571 PLBD2Q8NHP8 589 aa13.45□□□□□ -0.26
ERBB2-201ENST00000269571 CALR3Q96L12 384 aaKnown RBP13.45□□□□□ -0.26
ERBB2-201ENST00000269571 ARHGAP31Q2M1Z3 1444 aa13.44□□□□□ -0.26
ERBB2-201ENST00000269571 BUB1O43683 1085 aa13.44□□□□□ -0.26
ERBB2-201ENST00000269571 HLA-DOAP06340 250 aa13.44□□□□□ -0.26
ERBB2-201ENST00000269571 ITGA6P23229 1130 aa13.44□□□□□ -0.26
ERBB2-201ENST00000269571 GJC1P36383 396 aa13.44□□□□□ -0.26
ERBB2-201ENST00000269571 TNNI2P48788 182 aa13.44□□□□□ -0.26
ERBB2-201ENST00000269571 EP400NLQ6ZTU2 488 aa13.44□□□□□ -0.26
ERBB2-201ENST00000269571 RRAGAQ7L523 313 aa13.44□□□□□ -0.26
ERBB2-201ENST00000269571 IL25Q9H293 177 aa13.44□□□□□ -0.26
ERBB2-201ENST00000269571 KCNJ18B7U540 433 aa13.44□□□□□ -0.26
ERBB2-201ENST00000269571 LACTBP83111 547 aaPredicted RBP13.44□□□□□ -0.26
ERBB2-201ENST00000269571 TOB2Q14106 344 aaPredicted RBP13.44□□□□□ -0.26
ERBB2-201ENST00000269571 KCNJ12Q14500 433 aa13.44□□□□□ -0.26
ERBB2-201ENST00000269571 KRT71Q3SY84 523 aa13.44□□□□□ -0.26
ERBB2-201ENST00000269571 DYMQ7RTS9 669 aa13.44□□□□□ -0.26
ERBB2-201ENST00000269571 SMARCC2Q8TAQ2 1214 aa13.44□□□□□ -0.26
ERBB2-201ENST00000269571 AATKQ6ZMQ8 1374 aa13.44□□□□□ -0.26
ERBB2-201ENST00000269571 A2ML1A8K2U0 1454 aa13.44□□□□□ -0.26
ERBB2-201ENST00000269571 SYNMO15061 1565 aa13.44□□□□□ -0.26
ERBB2-201ENST00000269571 POTEJP0CG39 1038 aa13.44□□□□□ -0.26
ERBB2-201ENST00000269571 PHKG2P15735 406 aa13.44□□□□□ -0.26
ERBB2-201ENST00000269571 IRX1P78414 480 aaPredicted RBP13.44□□□□□ -0.26
ERBB2-201ENST00000269571 CETN1Q12798 172 aa13.44□□□□□ -0.26
ERBB2-201ENST00000269571 TOGARAM2Q6ZUX3 1019 aa13.44□□□□□ -0.26
ERBB2-201ENST00000269571 IRX2Q9BZI1 471 aaPredicted RBP13.44□□□□□ -0.26
ERBB2-201ENST00000269571 PPP1R12CQ9BZL4 782 aa13.44□□□□□ -0.26
ERBB2-201ENST00000269571 CARMIL3Q8ND23 1372 aa13.44□□□□□ -0.26
ERBB2-201ENST00000269571 LRRIQ1Q96JM4 1722 aa13.44□□□□□ -0.26
ERBB2-201ENST00000269571 IFT88Q13099 833 aa13.43□□□□□ -0.26
ERBB2-201ENST00000269571 LRRC24Q50LG9 513 aa13.43□□□□□ -0.26
ERBB2-201ENST00000269571 DCAF17Q5H9S7 520 aaPredicted RBP13.43□□□□□ -0.26
ERBB2-201ENST00000269571 VSTM4Q8IW00 320 aa13.43□□□□□ -0.26
ERBB2-201ENST00000269571 PIK3R5Q8WYR1 880 aa13.43□□□□□ -0.26
ERBB2-201ENST00000269571 SAAL1Q96ER3 474 aa13.43□□□□□ -0.26
ERBB2-201ENST00000269571 NPHP4O75161 1426 aaPredicted RBP13.43□□□□□ -0.26
ERBB2-201ENST00000269571 ZNF532Q9HCE3 1301 aa13.43□□□□□ -0.26
ERBB2-201ENST00000269571 CALML3P27482 149 aa13.43□□□□□ -0.26
ERBB2-201ENST00000269571 CXCR5P32302 372 aa13.43□□□□□ -0.26
ERBB2-201ENST00000269571 GNAQP50148 359 aa13.43□□□□□ -0.26
ERBB2-201ENST00000269571 NOX5Q96PH1 765 aa13.43□□□□□ -0.26
ERBB2-201ENST00000269571 TBCAO75347 108 aaKnown RBP13.43□□□□□ -0.26
ERBB2-201ENST00000269571 DBN1Q16643 649 aa13.43□□□□□ -0.26
ERBB2-201ENST00000269571 UHMK1Q8TAS1 419 aaKnown RBP13.43□□□□□ -0.26
ERBB2-201ENST00000269571 TSGA10Q9BZW7 698 aa13.43□□□□□ -0.26
ERBB2-201ENST00000269571 IGSF1Q8N6C5 1336 aa13.43□□□□□ -0.26
ERBB2-201ENST00000269571 SASH1O94885 1247 aa13.43□□□□□ -0.26
ERBB2-201ENST00000269571 SARM1Q6SZW1 724 aa13.43□□□□□ -0.26
ERBB2-201ENST00000269571 CCDC24Q8N4L8 307 aa13.43□□□□□ -0.26
ERBB2-201ENST00000269571 MRRFQ96E11 262 aaKnown RBP13.43□□□□□ -0.26
ERBB2-201ENST00000269571 TBC1D7Q9P0N9 293 aa13.43□□□□□ -0.26
ERBB2-201ENST00000269571 PTCH1Q13635 1447 aa13.42□□□□□ -0.26
ERBB2-201ENST00000269571 SHROOM2Q13796 1616 aa13.42□□□□□ -0.26
ERBB2-201ENST00000269571 PAK2Q13177 524 aa13.42□□□□□ -0.26
ERBB2-201ENST00000269571 MORC3Q14149 939 aa13.42□□□□□ -0.26
ERBB2-201ENST00000269571 SPATA1Q5VX52 437 aa13.42□□□□□ -0.26
ERBB2-201ENST00000269571 KRT79Q5XKE5 535 aa13.42□□□□□ -0.26
ERBB2-201ENST00000269571 HOOK3Q86VS8 718 aa13.42□□□□□ -0.26
ERBB2-201ENST00000269571 IKBKBO14920 756 aa13.42□□□□□ -0.26
ERBB2-201ENST00000269571 SH3GL3Q99963 347 aa13.42□□□□□ -0.26
ERBB2-201ENST00000269571 ATP7BP35670 1465 aa13.42□□□□□ -0.26
ERBB2-201ENST00000269571 CLASP1Q7Z460 1538 aa13.42□□□□□ -0.26
ERBB2-201ENST00000269571 PPP1R12AO14974 1030 aaPredicted RBP13.42□□□□□ -0.26
ERBB2-201ENST00000269571 GNPATO15228 680 aa13.42□□□□□ -0.26
ERBB2-201ENST00000269571 CTNNA2P26232 953 aa13.42□□□□□ -0.26
ERBB2-201ENST00000269571 ZBTB16Q05516 673 aa13.42□□□□□ -0.26
ERBB2-201ENST00000269571 ARMCX5Q6P1M9 558 aa13.42□□□□□ -0.26
ERBB2-201ENST00000269571 HAUS7Q99871 368 aa13.42□□□□□ -0.26
ERBB2-201ENST00000269571 RTCBQ9Y3I0 505 aaKnown RBP13.42□□□□□ -0.26
ERBB2-201ENST00000269571 RNF17Q9BXT8 1623 aaKnown RBP13.42□□□□□ -0.26
ERBB2-201ENST00000269571 CDC25AP30304 524 aa13.42□□□□□ -0.26
ERBB2-201ENST00000269571 FAM169AQ9Y6X4 670 aa13.42□□□□□ -0.26
ERBB2-201ENST00000269571 GNAT2P19087 354 aa13.41□□□□□ -0.26
ERBB2-201ENST00000269571 TXKP42681 527 aa13.41□□□□□ -0.26
ERBB2-201ENST00000269571 PLCD1P51178 756 aa13.41□□□□□ -0.26
ERBB2-201ENST00000269571 KIF23Q02241 960 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms