RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 PRAMEF18Q5VWM3 479 aa14.5□□□□□ -0.09
PRPF6-201ENST00000266079 CCAR2Q8N163 923 aaKnown RBP14.5□□□□□ -0.09
PRPF6-201ENST00000266079 LEO1Q8WVC0 666 aaPredicted RBP14.5□□□□□ -0.09
PRPF6-201ENST00000266079 MYL10Q9BUA6 226 aa14.5□□□□□ -0.09
PRPF6-201ENST00000266079 OSBPL5Q9H0X9 879 aaPredicted RBP14.5□□□□□ -0.09
PRPF6-201ENST00000266079 KCND1Q9NSA2 647 aa14.5□□□□□ -0.09
PRPF6-201ENST00000266079 TFIP11Q9UBB9 837 aaKnown RBP14.5□□□□□ -0.09
PRPF6-201ENST00000266079 ZNF70Q9UC06 446 aaPredicted RBP14.5□□□□□ -0.09
PRPF6-201ENST00000266079 CCDC69A6NI79 296 aa14.5□□□□□ -0.09
PRPF6-201ENST00000266079 NR1I2O75469 434 aa14.5□□□□□ -0.09
PRPF6-201ENST00000266079 HNRNPH2P55795 449 aaKnown RBP14.5□□□□□ -0.09
PRPF6-201ENST00000266079 CCZ1BP86790 482 aa14.5□□□□□ -0.09
PRPF6-201ENST00000266079 CCZ1P86791 482 aaPredicted RBP14.5□□□□□ -0.09
PRPF6-201ENST00000266079 TRPM4Q8TD43 1214 aa14.5□□□□□ -0.09
PRPF6-201ENST00000266079 TMEM39BQ9GZU3 492 aa14.5□□□□□ -0.09
PRPF6-201ENST00000266079 TMOD2Q9NZR1 351 aa14.5□□□□□ -0.09
PRPF6-201ENST00000266079 CCT2P78371 535 aaKnown RBP14.49□□□□□ -0.09
PRPF6-201ENST00000266079 HDLBPQ00341 1268 aaKnown RBP14.49□□□□□ -0.09
PRPF6-201ENST00000266079 STAG1Q8WVM7 1258 aa14.49□□□□□ -0.09
PRPF6-201ENST00000266079 TRMT1Q9NXH9 659 aaKnown RBP14.49□□□□□ -0.09
PRPF6-201ENST00000266079 IFIT3O14879 490 aaKnown RBP14.49□□□□□ -0.09
PRPF6-201ENST00000266079 TSPY2A6NKD2 308 aa14.48□□□□□ -0.09
PRPF6-201ENST00000266079 EXOSC10Q01780 885 aaKnown RBP14.48□□□□□ -0.09
PRPF6-201ENST00000266079 DLK2Q6UY11 383 aa14.48□□□□□ -0.09
PRPF6-201ENST00000266079 SH3BP5LQ7L8J4 393 aa14.48□□□□□ -0.09
PRPF6-201ENST00000266079 RNF41Q9H4P4 317 aaPredicted RBP14.48□□□□□ -0.09
PRPF6-201ENST00000266079 NCOA5Q9HCD5 579 aaKnown RBP14.48□□□□□ -0.09
PRPF6-201ENST00000266079 FHOD1Q9Y613 1164 aa14.48□□□□□ -0.09
PRPF6-201ENST00000266079 ZMYM6O95789 1325 aa14.48□□□□□ -0.09
PRPF6-201ENST00000266079 H7C1D1 291 aa14.48□□□□□ -0.09
PRPF6-201ENST00000266079 MYO1BO43795 1136 aa14.48□□□□□ -0.09
PRPF6-201ENST00000266079 HMGB1P09429 215 aaKnown RBP14.48□□□□□ -0.09
PRPF6-201ENST00000266079 PDE4BQ07343 736 aa14.48□□□□□ -0.09
PRPF6-201ENST00000266079 SHROOM1Q2M3G4 852 aaPredicted RBP14.48□□□□□ -0.09
PRPF6-201ENST00000266079 KIF4BQ2VIQ3 1234 aa14.48□□□□□ -0.09
PRPF6-201ENST00000266079 TMEM67Q5HYA8 995 aa14.48□□□□□ -0.09
PRPF6-201ENST00000266079 TMED8Q6PL24 325 aaPredicted RBP14.48□□□□□ -0.09
PRPF6-201ENST00000266079 NFXL1Q6ZNB6 911 aa14.48□□□□□ -0.09
PRPF6-201ENST00000266079 CLEC10AQ8IUN9 316 aa14.48□□□□□ -0.09
PRPF6-201ENST00000266079 PLCD3Q8N3E9 789 aa14.48□□□□□ -0.09
PRPF6-201ENST00000266079 CRACR2BQ8N4Y2 399 aaPredicted RBP14.48□□□□□ -0.09
PRPF6-201ENST00000266079 BICD2Q8TD16 824 aa14.48□□□□□ -0.09
PRPF6-201ENST00000266079 L2HGDHQ9H9P8 463 aa14.48□□□□□ -0.09
PRPF6-201ENST00000266079 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.48□□□□□ -0.09
PRPF6-201ENST00000266079 SLC3A2P08195 630 aaKnown RBP14.47□□□□□ -0.09
PRPF6-201ENST00000266079 MIGA2Q7L4E1 593 aa14.47□□□□□ -0.09
PRPF6-201ENST00000266079 GPC2Q8N158 579 aa14.47□□□□□ -0.09
PRPF6-201ENST00000266079 ESR2Q92731 530 aa14.47□□□□□ -0.09
PRPF6-201ENST00000266079 PGBD1Q96JS3 809 aa14.47□□□□□ -0.09
PRPF6-201ENST00000266079 CDK8P49336 464 aa14.47□□□□□ -0.09
PRPF6-201ENST00000266079 TFAP4Q01664 338 aa14.47□□□□□ -0.09
PRPF6-201ENST00000266079 SBK1Q52WX2 424 aa14.47□□□□□ -0.09
PRPF6-201ENST00000266079 GTF3C6Q969F1 213 aa14.47□□□□□ -0.09
PRPF6-201ENST00000266079 CSRNP1Q96S65 589 aa14.47□□□□□ -0.09
PRPF6-201ENST00000266079 UBAC1Q9BSL1 405 aa14.47□□□□□ -0.09
PRPF6-201ENST00000266079 KRT23Q9C075 422 aa14.47□□□□□ -0.09
PRPF6-201ENST00000266079 ERCC6LQ2NKX8 1250 aa14.47□□□□□ -0.09
PRPF6-201ENST00000266079 CERS3Q8IU89 383 aa14.47□□□□□ -0.09
PRPF6-201ENST00000266079 MRIQ9BWK5 157 aa14.47□□□□□ -0.09
PRPF6-201ENST00000266079 CNNM2Q9H8M5 875 aa14.47□□□□□ -0.09
PRPF6-201ENST00000266079 GPRC5DQ9NZD1 345 aa14.47□□□□□ -0.09
PRPF6-201ENST00000266079 ANAPC4Q9UJX5 808 aa14.47□□□□□ -0.09
PRPF6-201ENST00000266079 ZNF646O15015 1829 aaPredicted RBP14.46□□□□□ -0.09
PRPF6-201ENST00000266079 KLF18A0A0U1RQI7 1052 aa14.46□□□□□ -0.09
PRPF6-201ENST00000266079 MPHOSPH10O00566 681 aaKnown RBP14.46□□□□□ -0.09
PRPF6-201ENST00000266079 FILIP1Q7Z7B0 1213 aa14.46□□□□□ -0.09
PRPF6-201ENST00000266079 MICU3Q86XE3 530 aa14.46□□□□□ -0.09
PRPF6-201ENST00000266079 ZNF444Q8N0Y2 327 aaPredicted RBP14.46□□□□□ -0.09
PRPF6-201ENST00000266079 ZNF526Q8TF50 670 aaPredicted RBP14.46□□□□□ -0.09
PRPF6-201ENST00000266079 FZD1Q9UP38 647 aa14.46□□□□□ -0.09
PRPF6-201ENST00000266079 GRIN3BO60391 1043 aa14.46□□□□□ -0.1
PRPF6-201ENST00000266079 HLA-DOAP06340 250 aa14.46□□□□□ -0.1
PRPF6-201ENST00000266079 RPS12P25398 132 aaKnown RBP14.46□□□□□ -0.1
PRPF6-201ENST00000266079 CLCN6P51797 869 aa14.46□□□□□ -0.1
PRPF6-201ENST00000266079 SPDYE2Q495Y8 402 aa14.46□□□□□ -0.1
PRPF6-201ENST00000266079 C11orf57Q6ZUT1 292 aaPredicted RBP14.46□□□□□ -0.1
PRPF6-201ENST00000266079 TRIM34Q9BYJ4 488 aa14.46□□□□□ -0.1
PRPF6-201ENST00000266079 FEZ2Q9UHY8 353 aaPredicted RBP14.46□□□□□ -0.1
PRPF6-201ENST00000266079 SERPINB13Q9UIV8 391 aa14.46□□□□□ -0.1
PRPF6-201ENST00000266079 HACL1Q9UJ83 578 aa14.46□□□□□ -0.1
PRPF6-201ENST00000266079 SBF1O95248 1867 aa14.45□□□□□ -0.1
PRPF6-201ENST00000266079 TSPY3P0CV98 308 aa14.45□□□□□ -0.1
PRPF6-201ENST00000266079 TSPY8P0CW00 308 aa14.45□□□□□ -0.1
PRPF6-201ENST00000266079 PNMA6AP0CW24 399 aaPredicted RBP14.45□□□□□ -0.1
PRPF6-201ENST00000266079 PLA2G4AP47712 749 aa14.45□□□□□ -0.1
PRPF6-201ENST00000266079 MAPK8IP2Q13387 824 aaPredicted RBP14.45□□□□□ -0.1
PRPF6-201ENST00000266079 ANGEL2Q5VTE6 544 aaKnown RBP14.45□□□□□ -0.1
PRPF6-201ENST00000266079 DPF2Q92785 391 aa14.45□□□□□ -0.1
PRPF6-201ENST00000266079 TRERF1Q96PN7 1200 aa14.45□□□□□ -0.1
PRPF6-201ENST00000266079 TNKSO95271 1327 aa14.45□□□□□ -0.1
PRPF6-201ENST00000266079 HIRAP54198 1017 aaPredicted RBP14.45□□□□□ -0.1
PRPF6-201ENST00000266079 RASA3Q14644 834 aa14.45□□□□□ -0.1
PRPF6-201ENST00000266079 CCDC82Q8N4S0 544 aa14.45□□□□□ -0.1
PRPF6-201ENST00000266079 NUP133Q8WUM0 1156 aa14.45□□□□□ -0.1
PRPF6-201ENST00000266079 IDI2Q9BXS1 227 aa14.45□□□□□ -0.1
PRPF6-201ENST00000266079 STX8Q9UNK0 236 aa14.45□□□□□ -0.1
PRPF6-201ENST00000266079 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.45□□□□□ -0.1
PRPF6-201ENST00000266079 GOLGA8BA8MQT2 603 aa14.44□□□□□ -0.1
PRPF6-201ENST00000266079 GDF11O95390 407 aa14.44□□□□□ -0.1
PRPF6-201ENST00000266079 ZNF280AP59817 542 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms