RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 NEBLO76041 1014 aa18.69■□□□□ 0.58
PHRF1-201ENST00000264555 TRAPPC10P48553 1259 aa18.69■□□□□ 0.58
PHRF1-201ENST00000264555 INF2Q27J81 1249 aa18.69■□□□□ 0.58
PHRF1-201ENST00000264555 TTC14Q96N46 770 aa18.69■□□□□ 0.58
PHRF1-201ENST00000264555 IQCDQ96DY2 449 aa18.68■□□□□ 0.58
PHRF1-201ENST00000264555 ZSWIM5Q9P217 1185 aa18.68■□□□□ 0.58
PHRF1-201ENST00000264555 LONP1P36776 959 aaKnown RBP18.68■□□□□ 0.58
PHRF1-201ENST00000264555 PTGDRQ13258 359 aa18.68■□□□□ 0.58
PHRF1-201ENST00000264555 LARGE2Q8N3Y3 721 aa18.68■□□□□ 0.58
PHRF1-201ENST00000264555 GTPBP6O43824 516 aaPredicted RBP18.68■□□□□ 0.58
PHRF1-201ENST00000264555 CLEC4GQ6UXB4 293 aa18.68■□□□□ 0.58
PHRF1-201ENST00000264555 JAKMIP2Q96AA8 810 aa18.68■□□□□ 0.58
PHRF1-201ENST00000264555 PKNOX2Q96KN3 472 aa18.68■□□□□ 0.58
PHRF1-201ENST00000264555 FANCLQ9NW38 375 aa18.68■□□□□ 0.58
PHRF1-201ENST00000264555 CDC25BP30305 580 aa18.68■□□□□ 0.58
PHRF1-201ENST00000264555 DYNLL1P63167 89 aaKnown RBP18.68■□□□□ 0.58
PHRF1-201ENST00000264555 NEK8Q86SG6 692 aa18.68■□□□□ 0.58
PHRF1-201ENST00000264555 BBXQ8WY36 941 aaPredicted RBP18.68■□□□□ 0.58
PHRF1-201ENST00000264555 KIF2CQ99661 725 aa18.68■□□□□ 0.58
PHRF1-201ENST00000264555 TCHPQ9BT92 498 aa18.68■□□□□ 0.58
PHRF1-201ENST00000264555 CDHR2Q9BYE9 1310 aa18.68■□□□□ 0.58
PHRF1-201ENST00000264555 GPKOWQ92917 476 aaPredicted RBP eCLIP18.67■□□□□ 0.58
PHRF1-201ENST00000264555 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.67■□□□□ 0.588e-6■■■■□ 25.9
PHRF1-201ENST00000264555 MCTP2Q6DN12 878 aa18.67■□□□□ 0.58
PHRF1-201ENST00000264555 CARD6Q9BX69 1037 aa18.67■□□□□ 0.58
PHRF1-201ENST00000264555 VAV2P52735 878 aa18.67■□□□□ 0.58
PHRF1-201ENST00000264555 SMC1AQ14683 1233 aaKnown RBP18.67■□□□□ 0.58
PHRF1-201ENST00000264555 SYMPKQ92797 1274 aaKnown RBP18.67■□□□□ 0.58
PHRF1-201ENST00000264555 RPAP1Q9BWH6 1393 aaPredicted RBP18.67■□□□□ 0.58
PHRF1-201ENST00000264555 APBA3O96018 575 aa18.67■□□□□ 0.58
PHRF1-201ENST00000264555 OR52Z1P0C646 297 aa18.67■□□□□ 0.58
PHRF1-201ENST00000264555 LRMPQ12912 555 aa18.67■□□□□ 0.58
PHRF1-201ENST00000264555 MMP1P03956 469 aa18.66■□□□□ 0.58
PHRF1-201ENST00000264555 STRBPQ96SI9 672 aaKnown RBP18.66■□□□□ 0.58
PHRF1-201ENST00000264555 BSDC1Q9NW68 430 aaPredicted RBP18.66■□□□□ 0.58
PHRF1-201ENST00000264555 PCDHA5Q9Y5H7 936 aa18.66■□□□□ 0.58
PHRF1-201ENST00000264555 TNNC1P63316 161 aa18.66■□□□□ 0.58
PHRF1-201ENST00000264555 USH1GQ495M9 461 aa18.66■□□□□ 0.58
PHRF1-201ENST00000264555 CLEC17AQ6ZS10 378 aa18.66■□□□□ 0.58
PHRF1-201ENST00000264555 HDXQ7Z353 690 aa18.66■□□□□ 0.58
PHRF1-201ENST00000264555 SPATA1Q5VX52 437 aa18.66■□□□□ 0.58
PHRF1-201ENST00000264555 CCDC155Q8N6L0 562 aa18.66■□□□□ 0.58
PHRF1-201ENST00000264555 ISCA1Q9BUE6 129 aa18.66■□□□□ 0.58
PHRF1-201ENST00000264555 FTOQ9C0B1 505 aaKnown RBP eCLIP18.66■□□□□ 0.58
PHRF1-201ENST00000264555 PKD2L1Q9P0L9 805 aa18.66■□□□□ 0.58
PHRF1-201ENST00000264555 KDM3AQ9Y4C1 1321 aa18.66■□□□□ 0.58
PHRF1-201ENST00000264555 GOLGA8HP0CJ92 632 aa18.66■□□□□ 0.58
PHRF1-201ENST00000264555 ADKP55263 362 aaKnown RBP18.66■□□□□ 0.58
PHRF1-201ENST00000264555 SLC9C1Q4G0N8 1177 aa18.66■□□□□ 0.58
PHRF1-201ENST00000264555 DDX12PQ92771 950 aa18.66■□□□□ 0.58
PHRF1-201ENST00000264555 KCNJ18B7U540 433 aa18.66■□□□□ 0.58
PHRF1-201ENST00000264555 MORC3Q14149 939 aa18.66■□□□□ 0.58
PHRF1-201ENST00000264555 KCNJ12Q14500 433 aa18.66■□□□□ 0.58
PHRF1-201ENST00000264555 ZNF827Q17R98 1081 aa18.66■□□□□ 0.58
PHRF1-201ENST00000264555 USP42Q9H9J4 1324 aaKnown RBP18.66■□□□□ 0.58
PHRF1-201ENST00000264555 PALLDQ8WX93 1383 aa18.66■□□□□ 0.58
PHRF1-201ENST00000264555 ARHGEF35A5YM69 484 aa18.65■□□□□ 0.58
PHRF1-201ENST00000264555 BACH1O14867 736 aa18.65■□□□□ 0.58
PHRF1-201ENST00000264555 EZRP15311 586 aaKnown RBP18.65■□□□□ 0.58
PHRF1-201ENST00000264555 CCDC91Q7Z6B0 441 aa18.65■□□□□ 0.58
PHRF1-201ENST00000264555 CSRNP2Q9H175 543 aa18.65■□□□□ 0.58
PHRF1-201ENST00000264555 PSTPIP2Q9H939 334 aa18.65■□□□□ 0.58
PHRF1-201ENST00000264555 PXDNLA1KZ92 1463 aa18.65■□□□□ 0.58
PHRF1-201ENST00000264555 IBSPP21815 317 aaPredicted RBP18.65■□□□□ 0.58
PHRF1-201ENST00000264555 SECISBP2LQ93073 1101 aaKnown RBP18.65■□□□□ 0.58
PHRF1-201ENST00000264555 H7C1D1 291 aa18.65■□□□□ 0.58
PHRF1-201ENST00000264555 TECP42680 631 aa18.65■□□□□ 0.58
PHRF1-201ENST00000264555 SMTNP53814 917 aa18.65■□□□□ 0.58
PHRF1-201ENST00000264555 TMC4Q7Z404 712 aa18.65■□□□□ 0.58
PHRF1-201ENST00000264555 NLGN1Q8N2Q7 840 aa18.65■□□□□ 0.58
PHRF1-201ENST00000264555 GSDMAQ96QA5 445 aa18.65■□□□□ 0.58
PHRF1-201ENST00000264555 USP32Q8NFA0 1604 aa18.65■□□□□ 0.58
PHRF1-201ENST00000264555 REREQ9P2R6 1566 aa18.64■□□□□ 0.58
PHRF1-201ENST00000264555 DLGAP5Q15398 846 aa18.64■□□□□ 0.58
PHRF1-201ENST00000264555 ASIC2Q16515 512 aa18.64■□□□□ 0.58
PHRF1-201ENST00000264555 IKBKBO14920 756 aa18.64■□□□□ 0.57
PHRF1-201ENST00000264555 ZYXQ15942 572 aaKnown RBP18.64■□□□□ 0.57
PHRF1-201ENST00000264555 ALDH8A1Q9H2A2 487 aaPredicted RBP18.64■□□□□ 0.57
PHRF1-201ENST00000264555 FRMPD2Q68DX3 1309 aaPredicted RBP18.64■□□□□ 0.57
PHRF1-201ENST00000264555 RABL6Q3YEC7 729 aaPredicted RBP18.64■□□□□ 0.57
PHRF1-201ENST00000264555 SYNCQ9H7C4 482 aa18.64■□□□□ 0.57
PHRF1-201ENST00000264555 TECPR2O15040 1411 aa18.64■□□□□ 0.57
PHRF1-201ENST00000264555 VWDEQ8N2E2 1590 aa18.64■□□□□ 0.57
PHRF1-201ENST00000264555 C1orf167Q5SNV9 1468 aa18.64■□□□□ 0.57
PHRF1-201ENST00000264555 NF2P35240 595 aa18.64■□□□□ 0.57
PHRF1-201ENST00000264555 FOXO4P98177 505 aa18.64■□□□□ 0.57
PHRF1-201ENST00000264555 FAM196AQ6ZSG2 479 aa18.64■□□□□ 0.57
PHRF1-201ENST00000264555 LAD1O00515 517 aa18.63■□□□□ 0.57
PHRF1-201ENST00000264555 BBOX1O75936 387 aa18.63■□□□□ 0.57
PHRF1-201ENST00000264555 ELF2Q15723 593 aa18.63■□□□□ 0.57
PHRF1-201ENST00000264555 FRMPD1Q5SYB0 1578 aa18.63■□□□□ 0.57
PHRF1-201ENST00000264555 RNF187Q5TA31 235 aaPredicted RBP18.63■□□□□ 0.57
PHRF1-201ENST00000264555 SLF1Q9BQI6 1058 aa18.63■□□□□ 0.57
PHRF1-201ENST00000264555 PICK1Q9NRD5 415 aa18.63■□□□□ 0.57
PHRF1-201ENST00000264555 NOX5Q96PH1 765 aa18.63■□□□□ 0.57
PHRF1-201ENST00000264555 NUCKS1Q9H1E3 243 aaKnown RBP18.63■□□□□ 0.57
PHRF1-201ENST00000264555 CFBP00751 764 aa18.63■□□□□ 0.57
PHRF1-201ENST00000264555 RPN1P04843 607 aaKnown RBP18.63■□□□□ 0.57
PHRF1-201ENST00000264555 LRRC47Q8N1G4 583 aaKnown RBP18.63■□□□□ 0.57
PHRF1-201ENST00000264555 PCDHA4Q9UN74 947 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms