RNA–Protein interactions for RNA: ENST00000263598.6

LCN1-201, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-201ENST00000263598 MB21D1Q8N884 522 aa10.86□□□□□ -0.67
LCN1-201ENST00000263598 SHCBP1Q8NEM2 672 aa10.86□□□□□ -0.67
LCN1-201ENST00000263598 TRPV1Q8NER1 839 aa10.86□□□□□ -0.67
LCN1-201ENST00000263598 GUCD1Q96NT3 240 aa10.86□□□□□ -0.67
LCN1-201ENST00000263598 RIOK1Q9BRS2 568 aaKnown RBP10.86□□□□□ -0.67
LCN1-201ENST00000263598 COL25A1Q9BXS0 654 aaPredicted RBP10.86□□□□□ -0.67
LCN1-201ENST00000263598 MOV10L1Q9BXT6 1211 aaKnown RBP10.86□□□□□ -0.67
LCN1-201ENST00000263598 SPATC1LQ9H0A9 340 aa10.86□□□□□ -0.67
LCN1-201ENST00000263598 MROH8Q9H579 483 aa10.86□□□□□ -0.67
LCN1-201ENST00000263598 MCM9Q9NXL9 1143 aa10.86□□□□□ -0.67
LCN1-201ENST00000263598 UNC80Q8N2C7 3258 aa10.85□□□□□ -0.67
LCN1-201ENST00000263598 ERCC3P19447 782 aa10.85□□□□□ -0.67
LCN1-201ENST00000263598 GABPAQ06546 454 aa10.85□□□□□ -0.67
LCN1-201ENST00000263598 PLS1Q14651 629 aa10.85□□□□□ -0.67
LCN1-201ENST00000263598 HSP90AB4PQ58FF6 505 aa10.85□□□□□ -0.67
LCN1-201ENST00000263598 SLC9C2Q5TAH2 1124 aa10.85□□□□□ -0.67
LCN1-201ENST00000263598 TMEM179Q6ZVK1 233 aa10.85□□□□□ -0.67
LCN1-201ENST00000263598 ABRAQ8N0Z2 381 aa10.85□□□□□ -0.67
LCN1-201ENST00000263598 PRDM5Q9NQX1 630 aaPredicted RBP10.85□□□□□ -0.67
LCN1-201ENST00000263598 MYH1P12882 1939 aa10.85□□□□□ -0.67
LCN1-201ENST00000263598 FRMPD3Q5JV73 1810 aa10.84□□□□□ -0.67
LCN1-201ENST00000263598 A0A1W2PRG0 241 aa10.84□□□□□ -0.67
LCN1-201ENST00000263598 FLOT1O75955 427 aa10.84□□□□□ -0.67
LCN1-201ENST00000263598 SHHQ15465 462 aa10.84□□□□□ -0.67
LCN1-201ENST00000263598 TRIM60Q495X7 471 aa10.84□□□□□ -0.67
LCN1-201ENST00000263598 ANO1Q5XXA6 986 aa10.84□□□□□ -0.67
LCN1-201ENST00000263598 NCAPG2Q86XI2 1143 aa10.84□□□□□ -0.67
LCN1-201ENST00000263598 SH2D4AQ9H788 454 aa10.84□□□□□ -0.67
LCN1-201ENST00000263598 ARHGEF10LQ9HCE6 1279 aa10.84□□□□□ -0.67
LCN1-201ENST00000263598 SWAP70Q9UH65 585 aa10.84□□□□□ -0.67
LCN1-201ENST00000263598 EXOC6BQ9Y2D4 811 aa10.84□□□□□ -0.67
LCN1-201ENST00000263598 DNAH12Q6ZR08 3092 aa10.84□□□□□ -0.67
LCN1-201ENST00000263598 MYO5AQ9Y4I1 1855 aaKnown RBP10.83□□□□□ -0.68
LCN1-201ENST00000263598 COBLO75128 1261 aa10.83□□□□□ -0.68
LCN1-201ENST00000263598 SLC25A27O95847 323 aa10.83□□□□□ -0.68
LCN1-201ENST00000263598 FCER1AP12319 257 aa10.83□□□□□ -0.68
LCN1-201ENST00000263598 PDE6AP16499 860 aa10.83□□□□□ -0.68
LCN1-201ENST00000263598 DSG3P32926 999 aa10.83□□□□□ -0.68
LCN1-201ENST00000263598 ADCYAP1R1P41586 468 aa10.83□□□□□ -0.68
LCN1-201ENST00000263598 SNX17Q15036 470 aa10.83□□□□□ -0.68
LCN1-201ENST00000263598 LRRC41Q15345 812 aa10.83□□□□□ -0.68
LCN1-201ENST00000263598 C1orf53Q5VUE5 145 aa10.83□□□□□ -0.68
LCN1-201ENST00000263598 CEP85Q6P2H3 762 aa10.83□□□□□ -0.68
LCN1-201ENST00000263598 BADQ92934 168 aa10.83□□□□□ -0.68
LCN1-201ENST00000263598 ZNF236Q9UL36 1845 aa10.83□□□□□ -0.68
LCN1-201ENST00000263598 ZNF532Q9HCE3 1301 aa10.83□□□□□ -0.68
LCN1-201ENST00000263598 RARBP10826 455 aa10.82□□□□□ -0.68
LCN1-201ENST00000263598 SMAD3P84022 425 aaKnown RBP10.82□□□□□ -0.68
LCN1-201ENST00000263598 ICA1Q05084 483 aa10.82□□□□□ -0.68
LCN1-201ENST00000263598 PRAMEF19Q5SWL8 479 aa10.82□□□□□ -0.68
LCN1-201ENST00000263598 AMOTL1Q8IY63 956 aa10.82□□□□□ -0.68
LCN1-201ENST00000263598 CLASRPQ8N2M8 674 aaKnown RBP10.82□□□□□ -0.68
LCN1-201ENST00000263598 SDR42E1Q8WUS8 393 aa10.82□□□□□ -0.68
LCN1-201ENST00000263598 FERMT2Q96AC1 680 aa10.82□□□□□ -0.68
LCN1-201ENST00000263598 MAML3Q96JK9 1138 aa10.82□□□□□ -0.68
LCN1-201ENST00000263598 CDX2Q99626 313 aaPredicted RBP10.82□□□□□ -0.68
LCN1-201ENST00000263598 SEMA6BQ9H3T3 888 aa10.82□□□□□ -0.68
LCN1-201ENST00000263598 VCPKMTQ9H867 229 aa10.82□□□□□ -0.68
LCN1-201ENST00000263598 IL1RAPL2Q9NP60 686 aa10.82□□□□□ -0.68
LCN1-201ENST00000263598 DCP1AQ9NPI6 582 aaPredicted RBP10.82□□□□□ -0.68
LCN1-201ENST00000263598 XPNPEP3Q9NQH7 507 aa10.82□□□□□ -0.68
LCN1-201ENST00000263598 PDLIM7Q9NR12 457 aa10.82□□□□□ -0.68
LCN1-201ENST00000263598 NRBP1Q9UHY1 535 aa10.82□□□□□ -0.68
LCN1-201ENST00000263598 TMX2Q9Y320 296 aa10.82□□□□□ -0.68
LCN1-201ENST00000263598 TACC3Q9Y6A5 838 aa10.82□□□□□ -0.68
LCN1-201ENST00000263598 LAMA2P24043 3122 aaKnown RBP10.81□□□□□ -0.68
LCN1-201ENST00000263598 GOLIM4O00461 696 aa10.81□□□□□ -0.68
LCN1-201ENST00000263598 WDR46O15213 610 aaKnown RBP10.81□□□□□ -0.68
LCN1-201ENST00000263598 IFIT2P09913 472 aaKnown RBP10.81□□□□□ -0.68
LCN1-201ENST00000263598 RLBP1P12271 317 aa10.81□□□□□ -0.68
LCN1-201ENST00000263598 EVX2Q03828 476 aa10.81□□□□□ -0.68
LCN1-201ENST00000263598 FAM47AQ5JRC9 791 aa10.81□□□□□ -0.68
LCN1-201ENST00000263598 KIAA1755Q5JYT7 1200 aa10.81□□□□□ -0.68
LCN1-201ENST00000263598 C9orf50Q5SZB4 431 aa10.81□□□□□ -0.68
LCN1-201ENST00000263598 SAMD1Q6SPF0 538 aaPredicted RBP10.81□□□□□ -0.68
LCN1-201ENST00000263598 RNF180Q86T96 592 aa10.81□□□□□ -0.68
LCN1-201ENST00000263598 SPICE1Q8N0Z3 855 aa10.81□□□□□ -0.68
LCN1-201ENST00000263598 LCORLQ8N3X6 602 aa10.81□□□□□ -0.68
LCN1-201ENST00000263598 SLC44A5Q8NCS7 719 aa10.81□□□□□ -0.68
LCN1-201ENST00000263598 MAFAQ8NHW3 353 aaPredicted RBP10.81□□□□□ -0.68
LCN1-201ENST00000263598 RHPN1Q8TCX5 695 aa10.81□□□□□ -0.68
LCN1-201ENST00000263598 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.81□□□□□ -0.68
LCN1-201ENST00000263598 ATG4CQ96DT6 458 aa10.81□□□□□ -0.68
LCN1-201ENST00000263598 DDRGK1Q96HY6 314 aa10.81□□□□□ -0.68
LCN1-201ENST00000263598 CCDC17Q96LX7 622 aa10.81□□□□□ -0.68
LCN1-201ENST00000263598 MMP19Q99542 508 aa10.81□□□□□ -0.68
LCN1-201ENST00000263598 DNAJC2Q99543 621 aaKnown RBP10.81□□□□□ -0.68
LCN1-201ENST00000263598 ATP8A2Q9NTI2 1148 aa10.81□□□□□ -0.68
LCN1-201ENST00000263598 LTBP2Q14767 1821 aa10.8□□□□□ -0.68
LCN1-201ENST00000263598 TCRBV5S4A2TA0A5A2 114 aa10.8□□□□□ -0.68
LCN1-201ENST00000263598 TRIM43BA6NCK2 446 aa10.8□□□□□ -0.68
LCN1-201ENST00000263598 CYP2D6P10635 497 aa10.8□□□□□ -0.68
LCN1-201ENST00000263598 AKR1B1P15121 316 aa10.8□□□□□ -0.68
LCN1-201ENST00000263598 KCTD2Q14681 263 aa10.8□□□□□ -0.68
LCN1-201ENST00000263598 TMEM132BQ14DG7 1078 aa10.8□□□□□ -0.68
LCN1-201ENST00000263598 SH3RF1Q7Z6J0 888 aa10.8□□□□□ -0.68
LCN1-201ENST00000263598 TRIM43Q96BQ3 446 aaPredicted RBP10.8□□□□□ -0.68
LCN1-201ENST00000263598 KIF1BPQ96EK5 621 aa10.8□□□□□ -0.68
LCN1-201ENST00000263598 DYNLL2Q96FJ2 89 aa10.8□□□□□ -0.68
LCN1-201ENST00000263598 ARMT1Q9H993 441 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms