RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 NBPF3Q9H094 633 aa13.73□□□□□ -0.21
PFDN1-201ENST00000261813 PHIPQ8WWQ0 1821 aa13.73□□□□□ -0.21
PFDN1-201ENST00000261813 PRDM1O75626 825 aa13.72□□□□□ -0.21
PFDN1-201ENST00000261813 ASNSP08243 561 aa13.72□□□□□ -0.21
PFDN1-201ENST00000261813 RASA1P20936 1047 aa13.72□□□□□ -0.21
PFDN1-201ENST00000261813 GUCY1A2P33402 732 aa13.72□□□□□ -0.21
PFDN1-201ENST00000261813 ABCB5Q2M3G0 1257 aa13.72□□□□□ -0.21
PFDN1-201ENST00000261813 LSG1Q9H089 658 aaKnown RBP13.72□□□□□ -0.21
PFDN1-201ENST00000261813 INCENPQ9NQS7 918 aa13.72□□□□□ -0.21
PFDN1-201ENST00000261813 GINM1Q9NU53 330 aa13.72□□□□□ -0.21
PFDN1-201ENST00000261813 KCNH4Q9UQ05 1017 aa13.72□□□□□ -0.21
PFDN1-201ENST00000261813 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.72□□□□□ -0.21
PFDN1-201ENST00000261813 AFG3L2Q9Y4W6 797 aa13.72□□□□□ -0.21
PFDN1-201ENST00000261813 ZHX2Q9Y6X8 837 aa13.72□□□□□ -0.21
PFDN1-201ENST00000261813 USP17L5A8MUK1 530 aa13.71□□□□□ -0.21
PFDN1-201ENST00000261813 SEPT2Q15019 361 aa13.71□□□□□ -0.21
PFDN1-201ENST00000261813 TBC1D10CQ8IV04 446 aa13.71□□□□□ -0.21
PFDN1-201ENST00000261813 MAP4K1Q92918 833 aa13.71□□□□□ -0.21
PFDN1-201ENST00000261813 MCOLN1Q9GZU1 580 aa13.71□□□□□ -0.21
PFDN1-201ENST00000261813 MKNK2Q9HBH9 465 aa13.71□□□□□ -0.21
PFDN1-201ENST00000261813 LHX6Q9UPM6 363 aa13.71□□□□□ -0.21
PFDN1-201ENST00000261813 LAMA4Q16363 1823 aa13.71□□□□□ -0.22
PFDN1-201ENST00000261813 MANSC4A6NHS7 340 aaPredicted RBP13.71□□□□□ -0.22
PFDN1-201ENST00000261813 MPHOSPH10O00566 681 aaKnown RBP13.71□□□□□ -0.22
PFDN1-201ENST00000261813 SLC3A2P08195 630 aaKnown RBP13.71□□□□□ -0.22
PFDN1-201ENST00000261813 FGRP09769 529 aa13.71□□□□□ -0.22
PFDN1-201ENST00000261813 PDE4BQ07343 736 aa13.71□□□□□ -0.22
PFDN1-201ENST00000261813 RAB3GAP1Q15042 981 aa13.71□□□□□ -0.22
PFDN1-201ENST00000261813 TMEM179Q6ZVK1 233 aa13.71□□□□□ -0.22
PFDN1-201ENST00000261813 CCDC17Q96LX7 622 aa13.71□□□□□ -0.22
PFDN1-201ENST00000261813 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.71□□□□□ -0.22
PFDN1-201ENST00000261813 CABP5Q9NP86 173 aa13.71□□□□□ -0.22
PFDN1-201ENST00000261813 CTNNA3Q9UI47 895 aa13.71□□□□□ -0.22
PFDN1-201ENST00000261813 MYH8P13535 1937 aa13.7□□□□□ -0.22
PFDN1-201ENST00000261813 GREB1LQ9C091 1923 aaPredicted RBP13.7□□□□□ -0.22
PFDN1-201ENST00000261813 TESPA1A2RU30 521 aaPredicted RBP13.7□□□□□ -0.22
PFDN1-201ENST00000261813 TRIM75PA6NK02 468 aa13.7□□□□□ -0.22
PFDN1-201ENST00000261813 CXCL11O14625 94 aa13.7□□□□□ -0.22
PFDN1-201ENST00000261813 ZNF213O14771 459 aa13.7□□□□□ -0.22
PFDN1-201ENST00000261813 TM4SF4P48230 202 aa13.7□□□□□ -0.22
PFDN1-201ENST00000261813 GTF2A2P52657 109 aa13.7□□□□□ -0.22
PFDN1-201ENST00000261813 SPP2Q13103 211 aa13.7□□□□□ -0.22
PFDN1-201ENST00000261813 SNAPC2Q13487 334 aa13.7□□□□□ -0.22
PFDN1-201ENST00000261813 DGKZQ13574 1117 aa13.7□□□□□ -0.22
PFDN1-201ENST00000261813 MOGSQ13724 837 aa13.7□□□□□ -0.22
PFDN1-201ENST00000261813 CLEC10AQ8IUN9 316 aa13.7□□□□□ -0.22
PFDN1-201ENST00000261813 ZNF280CQ8ND82 737 aa13.7□□□□□ -0.22
PFDN1-201ENST00000261813 NKX2-3Q8TAU0 364 aa13.7□□□□□ -0.22
PFDN1-201ENST00000261813 STAG1Q8WVM7 1258 aa13.7□□□□□ -0.22
PFDN1-201ENST00000261813 BRI3BPQ8WY22 251 aa13.7□□□□□ -0.22
PFDN1-201ENST00000261813 WDR18Q9BV38 432 aa13.7□□□□□ -0.22
PFDN1-201ENST00000261813 TBC1D2Q9BYX2 928 aa13.7□□□□□ -0.22
PFDN1-201ENST00000261813 AS3MTQ9HBK9 375 aa13.7□□□□□ -0.22
PFDN1-201ENST00000261813 ZNF287Q9HBT7 754 aa13.7□□□□□ -0.22
PFDN1-201ENST00000261813 ANO2Q9NQ90 1003 aa13.7□□□□□ -0.22
PFDN1-201ENST00000261813 RBM8AQ9Y5S9 174 aaKnown RBP13.7□□□□□ -0.22
PFDN1-201ENST00000261813 NEDD4P46934 1319 aa13.69□□□□□ -0.22
PFDN1-201ENST00000261813 CCL15-CCL14A0A0B4J2E2 113 aa13.69□□□□□ -0.22
PFDN1-201ENST00000261813 A0A0G2JLL6 359 aaPredicted RBP13.69□□□□□ -0.22
PFDN1-201ENST00000261813 IGF2BP3O00425 579 aaKnown RBP eCLIP13.69□□□□□ -0.22
PFDN1-201ENST00000261813 ORC4O43929 436 aa13.69□□□□□ -0.22
PFDN1-201ENST00000261813 CYP21A2P08686 494 aa13.69□□□□□ -0.22
PFDN1-201ENST00000261813 MCCP23508 829 aa13.69□□□□□ -0.22
PFDN1-201ENST00000261813 SREBF2Q12772 1141 aa13.69□□□□□ -0.22
PFDN1-201ENST00000261813 CCL15Q16663 113 aa13.69□□□□□ -0.22
PFDN1-201ENST00000261813 IMMTQ16891 758 aaKnown RBP13.69□□□□□ -0.22
PFDN1-201ENST00000261813 FAM47AQ5JRC9 791 aa13.69□□□□□ -0.22
PFDN1-201ENST00000261813 AKNAD1Q5T1N1 836 aa13.69□□□□□ -0.22
PFDN1-201ENST00000261813 PRRT2Q7Z6L0 340 aaPredicted RBP13.69□□□□□ -0.22
PFDN1-201ENST00000261813 ZNF444Q8N0Y2 327 aaPredicted RBP13.69□□□□□ -0.22
PFDN1-201ENST00000261813 PTPN18Q99952 460 aa13.69□□□□□ -0.22
PFDN1-201ENST00000261813 TAF6LQ9Y6J9 622 aa13.69□□□□□ -0.22
PFDN1-201ENST00000261813 PLIN4Q96Q06 1357 aa13.68□□□□□ -0.22
PFDN1-201ENST00000261813 IGKV6D-41A0A0C4DH26 115 aa13.68□□□□□ -0.22
PFDN1-201ENST00000261813 CETPP11597 493 aa13.68□□□□□ -0.22
PFDN1-201ENST00000261813 TFAP4Q01664 338 aa13.68□□□□□ -0.22
PFDN1-201ENST00000261813 MTMR2Q13614 643 aa13.68□□□□□ -0.22
PFDN1-201ENST00000261813 SIAH1Q8IUQ4 282 aa13.68□□□□□ -0.22
PFDN1-201ENST00000261813 ZNF687Q8N1G0 1237 aa13.68□□□□□ -0.22
PFDN1-201ENST00000261813 IL27Q8NEV9 243 aa13.68□□□□□ -0.22
PFDN1-201ENST00000261813 NEDD1Q8NHV4 660 aa13.68□□□□□ -0.22
PFDN1-201ENST00000261813 ACER1Q8TDN7 264 aa13.68□□□□□ -0.22
PFDN1-201ENST00000261813 A0A1W2PRG0 241 aa13.67□□□□□ -0.22
PFDN1-201ENST00000261813 PCP11498 1178 aaKnown RBP13.67□□□□□ -0.22
PFDN1-201ENST00000261813 INHBEP58166 350 aa13.67□□□□□ -0.22
PFDN1-201ENST00000261813 ICA1Q05084 483 aa13.67□□□□□ -0.22
PFDN1-201ENST00000261813 SH3D19Q5HYK7 790 aa13.67□□□□□ -0.22
PFDN1-201ENST00000261813 RRP12Q5JTH9 1297 aaKnown RBP13.67□□□□□ -0.22
PFDN1-201ENST00000261813 MFSD6Q6ZSS7 791 aa13.67□□□□□ -0.22
PFDN1-201ENST00000261813 C22orf23Q9BZE7 217 aa13.67□□□□□ -0.22
PFDN1-201ENST00000261813 RNF41Q9H4P4 317 aaPredicted RBP13.67□□□□□ -0.22
PFDN1-201ENST00000261813 TOMM22Q9NS69 142 aa13.67□□□□□ -0.22
PFDN1-201ENST00000261813 ARIH1Q9Y4X5 557 aaPredicted RBP13.67□□□□□ -0.22
PFDN1-201ENST00000261813 PTPRFP10586 1907 aa13.67□□□□□ -0.22
PFDN1-201ENST00000261813 TSPY2A6NKD2 308 aa13.66□□□□□ -0.22
PFDN1-201ENST00000261813 BTBD19C9JJ37 291 aa13.66□□□□□ -0.22
PFDN1-201ENST00000261813 USP17L10C9JJH3 530 aa13.66□□□□□ -0.22
PFDN1-201ENST00000261813 RANBP6O60518 1105 aaKnown RBP13.66□□□□□ -0.22
PFDN1-201ENST00000261813 TSPY3P0CV98 308 aa13.66□□□□□ -0.22
PFDN1-201ENST00000261813 TSPY8P0CW00 308 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms