RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 NEURL1BA8MQ27 555 aa8.1□□□□□ -1.11
CSDE1-201ENST00000261443 PDE2AO00408 941 aaPredicted RBP8.1□□□□□ -1.11
CSDE1-201ENST00000261443 ACTN4O43707 911 aaKnown RBP8.1□□□□□ -1.11
CSDE1-201ENST00000261443 PTPREP23469 700 aa8.1□□□□□ -1.11
CSDE1-201ENST00000261443 AFMP43652 599 aa8.1□□□□□ -1.11
CSDE1-201ENST00000261443 RFX5P48382 616 aaPredicted RBP8.1□□□□□ -1.11
CSDE1-201ENST00000261443 NNTQ13423 1086 aa8.1□□□□□ -1.11
CSDE1-201ENST00000261443 GCKRQ14397 625 aa8.1□□□□□ -1.11
CSDE1-201ENST00000261443 SMYD4Q8IYR2 804 aaPredicted RBP8.1□□□□□ -1.11
CSDE1-201ENST00000261443 EHBP1Q8NDI1 1231 aa8.1□□□□□ -1.11
CSDE1-201ENST00000261443 SPATA20Q8TB22 786 aa8.1□□□□□ -1.11
CSDE1-201ENST00000261443 CCDC114Q96M63 670 aa8.1□□□□□ -1.11
CSDE1-201ENST00000261443 PAGR1Q9BTK6 254 aa8.1□□□□□ -1.11
CSDE1-201ENST00000261443 DDX20Q9UHI6 824 aaKnown RBP8.1□□□□□ -1.11
CSDE1-201ENST00000261443 FBXO2Q9UK22 296 aaPredicted RBP8.1□□□□□ -1.11
CSDE1-201ENST00000261443 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.1□□□□□ -1.11
CSDE1-201ENST00000261443 GOLGA6L7A0A1B0GV03 622 aa8.1□□□□□ -1.11
CSDE1-201ENST00000261443 COBLO75128 1261 aa8.1□□□□□ -1.11
CSDE1-201ENST00000261443 SSBP05455 408 aaKnown RBP eCLIP8.1□□□□□ -1.11
CSDE1-201ENST00000261443 PDHBP11177 359 aa8.1□□□□□ -1.11
CSDE1-201ENST00000261443 GUCY1A3Q02108 690 aa8.1□□□□□ -1.11
CSDE1-201ENST00000261443 KRT31Q15323 416 aa8.1□□□□□ -1.11
CSDE1-201ENST00000261443 MPRIPQ6WCQ1 1025 aa8.1□□□□□ -1.11
CSDE1-201ENST00000261443 PARP9Q8IXQ6 854 aa8.1□□□□□ -1.11
CSDE1-201ENST00000261443 TSEN2Q8NCE0 465 aaKnown RBP8.1□□□□□ -1.11
CSDE1-201ENST00000261443 NGDNQ8NEJ9 315 aaKnown RBP8.1□□□□□ -1.11
CSDE1-201ENST00000261443 RNF217Q8TC41 542 aa8.1□□□□□ -1.11
CSDE1-201ENST00000261443 HDAC7Q8WUI4 952 aa8.1□□□□□ -1.11
CSDE1-201ENST00000261443 SCLT1Q96NL6 688 aa8.1□□□□□ -1.11
CSDE1-201ENST00000261443 POLD4Q9HCU8 107 aa8.1□□□□□ -1.11
CSDE1-201ENST00000261443 RBM28Q9NW13 759 aaKnown RBP8.1□□□□□ -1.11
CSDE1-201ENST00000261443 OVOS2A0A0G2JMS6 1433 aa8.1□□□□□ -1.11
CSDE1-201ENST00000261443 TRPM3Q9HCF6 1732 aaPredicted RBP8.1□□□□□ -1.11
CSDE1-201ENST00000261443 PXDNQ92626 1479 aa8.1□□□□□ -1.11
CSDE1-201ENST00000261443 ADAMTS7Q9UKP4 1686 aa8.1□□□□□ -1.11
CSDE1-201ENST00000261443 KRT86O43790 486 aa8.1□□□□□ -1.11
CSDE1-201ENST00000261443 IDEP14735 1019 aa8.1□□□□□ -1.11
CSDE1-201ENST00000261443 TRHP20396 242 aaPredicted RBP8.1□□□□□ -1.11
CSDE1-201ENST00000261443 IARSP41252 1262 aaKnown RBP8.1□□□□□ -1.11
CSDE1-201ENST00000261443 EPHB4P54760 987 aa8.1□□□□□ -1.11
CSDE1-201ENST00000261443 HERVK_113P62684 666 aa8.1□□□□□ -1.11
CSDE1-201ENST00000261443 IRX1P78414 480 aaPredicted RBP8.1□□□□□ -1.11
CSDE1-201ENST00000261443 SARNPP82979 210 aaKnown RBP8.1□□□□□ -1.11
CSDE1-201ENST00000261443 BIRC2Q13490 618 aa8.1□□□□□ -1.11
CSDE1-201ENST00000261443 EZH2Q15910 746 aaKnown RBP8.1□□□□□ -1.11
CSDE1-201ENST00000261443 TSR1Q2NL82 804 aaKnown RBP8.1□□□□□ -1.11
CSDE1-201ENST00000261443 NOSTRINQ8IVI9 506 aa8.1□□□□□ -1.11
CSDE1-201ENST00000261443 CCDC50Q8IVM0 306 aa8.1□□□□□ -1.11
CSDE1-201ENST00000261443 RNPC3Q96LT9 517 aaKnown RBP8.1□□□□□ -1.11
CSDE1-201ENST00000261443 LRRC1Q9BTT6 524 aa8.1□□□□□ -1.11
CSDE1-201ENST00000261443 CTNND2Q9UQB3 1225 aa8.1□□□□□ -1.11
CSDE1-201ENST00000261443 RGPD5Q99666 1765 aa8.09□□□□□ -1.11
CSDE1-201ENST00000261443 KRT14P02533 472 aa8.09□□□□□ -1.11
CSDE1-201ENST00000261443 FGAP02671 866 aa8.09□□□□□ -1.11
CSDE1-201ENST00000261443 SLC7A5Q01650 507 aa8.09□□□□□ -1.11
CSDE1-201ENST00000261443 WASHC4Q2M389 1173 aa8.09□□□□□ -1.11
CSDE1-201ENST00000261443 CCDC121Q6ZUS5 278 aa8.09□□□□□ -1.11
CSDE1-201ENST00000261443 OSBP2Q969R2 916 aa8.09□□□□□ -1.11
CSDE1-201ENST00000261443 RBM33Q96EV2 1170 aaKnown RBP8.09□□□□□ -1.11
CSDE1-201ENST00000261443 ZIM3Q96PE6 472 aa8.09□□□□□ -1.11
CSDE1-201ENST00000261443 CCT8L2Q96SF2 557 aa8.09□□□□□ -1.11
CSDE1-201ENST00000261443 MYD88Q99836 296 aa8.09□□□□□ -1.11
CSDE1-201ENST00000261443 ESF1Q9H501 851 aaKnown RBP8.09□□□□□ -1.11
CSDE1-201ENST00000261443 DDX21Q9NR30 783 aaKnown RBP eCLIP8.09□□□□□ -1.11
CSDE1-201ENST00000261443 TAB2Q9NYJ8 693 aa8.09□□□□□ -1.11
CSDE1-201ENST00000261443 DMGDHQ9UI17 866 aaKnown RBP8.09□□□□□ -1.11
CSDE1-201ENST00000261443 C4AP0C0L4 1744 aa8.09□□□□□ -1.11
CSDE1-201ENST00000261443 C4BP0C0L5 1744 aa8.09□□□□□ -1.11
CSDE1-201ENST00000261443 ZNF213O14771 459 aa8.09□□□□□ -1.11
CSDE1-201ENST00000261443 PPP1R37O75864 691 aa8.09□□□□□ -1.11
CSDE1-201ENST00000261443 IFIT1P09914 478 aaKnown RBP8.09□□□□□ -1.11
CSDE1-201ENST00000261443 CASP1P29466 404 aa8.09□□□□□ -1.11
CSDE1-201ENST00000261443 COPB1P53618 953 aaKnown RBP8.09□□□□□ -1.11
CSDE1-201ENST00000261443 SEC24CP53992 1094 aa8.09□□□□□ -1.11
CSDE1-201ENST00000261443 TIMM10P62072 90 aa8.09□□□□□ -1.11
CSDE1-201ENST00000261443 KRT83P78385 493 aa8.09□□□□□ -1.11
CSDE1-201ENST00000261443 MRPS25P82663 173 aaKnown RBP8.09□□□□□ -1.11
CSDE1-201ENST00000261443 HDLBPQ00341 1268 aaKnown RBP8.09□□□□□ -1.11
CSDE1-201ENST00000261443 DRP2Q13474 957 aa8.09□□□□□ -1.11
CSDE1-201ENST00000261443 NAA25Q14CX7 972 aa8.09□□□□□ -1.11
CSDE1-201ENST00000261443 E2F5Q15329 346 aa8.09□□□□□ -1.11
CSDE1-201ENST00000261443 PTGISQ16647 500 aa8.09□□□□□ -1.11
CSDE1-201ENST00000261443 CYB5D1Q6P9G0 228 aa8.09□□□□□ -1.11
CSDE1-201ENST00000261443 EMBQ6PCB8 327 aa8.09□□□□□ -1.11
CSDE1-201ENST00000261443 KDM7AQ6ZMT4 941 aa8.09□□□□□ -1.11
CSDE1-201ENST00000261443 USP49Q70CQ1 688 aa8.09□□□□□ -1.11
CSDE1-201ENST00000261443 NLRP14Q86W24 1093 aa8.09□□□□□ -1.11
CSDE1-201ENST00000261443 MMGT1Q8N4V1 131 aa8.09□□□□□ -1.11
CSDE1-201ENST00000261443 OR8K1Q8NGG5 319 aa8.09□□□□□ -1.11
CSDE1-201ENST00000261443 LIMA1Q9UHB6 759 aaKnown RBP8.09□□□□□ -1.11
CSDE1-201ENST00000261443 SETD1BQ9UPS6 1966 aaKnown RBP8.09□□□□□ -1.11
CSDE1-201ENST00000261443 ANO9A1A5B4 782 aa8.08□□□□□ -1.12
CSDE1-201ENST00000261443 BTBD18B2RXH4 712 aa8.08□□□□□ -1.12
CSDE1-201ENST00000261443 PPP1R3GB7ZBB8 358 aa8.08□□□□□ -1.12
CSDE1-201ENST00000261443 GBP2P32456 591 aaPredicted RBP8.08□□□□□ -1.12
CSDE1-201ENST00000261443 MATR3P43243 847 aaKnown RBP eCLIP8.08□□□□□ -1.12
CSDE1-201ENST00000261443 TOB1P50616 345 aaPredicted RBP8.08□□□□□ -1.12
CSDE1-201ENST00000261443 HDGFP51858 240 aaKnown RBP8.08□□□□□ -1.12
CSDE1-201ENST00000261443 UBXN1Q04323 297 aa8.08□□□□□ -1.12
CSDE1-201ENST00000261443 SAFBQ15424 915 aaKnown RBP eCLIP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms