RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 OXER1Q8TDS5 423 aa25.82■■□□□ 1.72
SIX3-201ENST00000260653 GRPEL1Q9HAV7 217 aa25.82■■□□□ 1.72
SIX3-201ENST00000260653 GOLGA8HP0CJ92 632 aa25.82■■□□□ 1.72
SIX3-201ENST00000260653 XBP1P17861 261 aa25.82■■□□□ 1.72
SIX3-201ENST00000260653 NASPP49321 788 aaPredicted RBP25.82■■□□□ 1.72
SIX3-201ENST00000260653 NR5A1Q13285 461 aa25.82■■□□□ 1.72
SIX3-201ENST00000260653 LRSAM1Q6UWE0 723 aa25.82■■□□□ 1.72
SIX3-201ENST00000260653 NLGN2Q8NFZ4 835 aa25.82■■□□□ 1.72
SIX3-201ENST00000260653 VEGFAP15692 232 aaPredicted RBP25.81■■□□□ 1.72
SIX3-201ENST00000260653 ME1P48163 572 aa25.81■■□□□ 1.72
SIX3-201ENST00000260653 STK38Q15208 465 aa25.81■■□□□ 1.72
SIX3-201ENST00000260653 DLGAP5Q15398 846 aa25.81■■□□□ 1.72
SIX3-201ENST00000260653 SLC35G1Q2M3R5 365 aa25.81■■□□□ 1.72
SIX3-201ENST00000260653 ANO1Q5XXA6 986 aa25.81■■□□□ 1.72
SIX3-201ENST00000260653 JDP2Q8WYK2 163 aa25.81■■□□□ 1.72
SIX3-201ENST00000260653 PHF20Q9BVI0 1012 aa25.81■■□□□ 1.72
SIX3-201ENST00000260653 FOXP1Q9H334 677 aaPredicted RBP25.81■■□□□ 1.72
SIX3-201ENST00000260653 GREB1LQ9C091 1923 aaPredicted RBP25.81■■□□□ 1.72
SIX3-201ENST00000260653 CLRN2A0PK11 232 aa25.81■■□□□ 1.72
SIX3-201ENST00000260653 PALM3A6NDB9 673 aaPredicted RBP25.81■■□□□ 1.72
SIX3-201ENST00000260653 YEATS4O95619 227 aa25.81■■□□□ 1.72
SIX3-201ENST00000260653 AGBL3Q8NEM8 1001 aa25.81■■□□□ 1.72
SIX3-201ENST00000260653 MPHOSPH10O00566 681 aaKnown RBP25.8■■□□□ 1.72
SIX3-201ENST00000260653 ENTPD3O75355 529 aa25.8■■□□□ 1.72
SIX3-201ENST00000260653 SCG2P13521 617 aa25.8■■□□□ 1.72
SIX3-201ENST00000260653 XRCC6P12956 609 aaKnown RBP eCLIP25.8■■□□□ 1.72
SIX3-201ENST00000260653 MRE11P49959 708 aa25.8■■□□□ 1.72
SIX3-201ENST00000260653 GNAQP50148 359 aa25.8■■□□□ 1.72
SIX3-201ENST00000260653 PFKFB3Q16875 520 aaPredicted RBP25.8■■□□□ 1.72
SIX3-201ENST00000260653 LRRC47Q8N1G4 583 aaKnown RBP25.8■■□□□ 1.72
SIX3-201ENST00000260653 DACT1Q9NYF0 836 aa25.8■■□□□ 1.72
SIX3-201ENST00000260653 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.8■■□□□ 1.72
SIX3-201ENST00000260653 ATRNL1Q5VV63 1379 aa25.79■■□□□ 1.72
SIX3-201ENST00000260653 RASSF7Q02833 373 aa25.79■■□□□ 1.72
SIX3-201ENST00000260653 USP17L2Q6R6M4 530 aa25.79■■□□□ 1.72
SIX3-201ENST00000260653 PCDHA7Q9UN72 937 aa25.79■■□□□ 1.72
SIX3-201ENST00000260653 TCP10L2B9ZVM9 353 aa25.79■■□□□ 1.72
SIX3-201ENST00000260653 CYTH3O43739 400 aa25.79■■□□□ 1.72
SIX3-201ENST00000260653 SF3A1Q15459 793 aaKnown RBP25.79■■□□□ 1.72
SIX3-201ENST00000260653 CIAPIN1Q6FI81 312 aa25.79■■□□□ 1.72
SIX3-201ENST00000260653 TMOD2Q9NZR1 351 aa25.79■■□□□ 1.72
SIX3-201ENST00000260653 SPTLC2O15270 562 aa25.78■■□□□ 1.72
SIX3-201ENST00000260653 NR1I2O75469 434 aa25.78■■□□□ 1.72
SIX3-201ENST00000260653 SHROOM1Q2M3G4 852 aaPredicted RBP25.78■■□□□ 1.72
SIX3-201ENST00000260653 KCNG4Q8TDN1 519 aa25.78■■□□□ 1.72
SIX3-201ENST00000260653 CPVLQ9H3G5 476 aa25.78■■□□□ 1.72
SIX3-201ENST00000260653 CLIP2Q9UDT6 1046 aa25.78■■□□□ 1.72
SIX3-201ENST00000260653 KLRF2D3W0D1 207 aa25.78■■□□□ 1.72
SIX3-201ENST00000260653 PARP1P09874 1014 aaKnown RBP25.78■■□□□ 1.72
SIX3-201ENST00000260653 ZNF70Q9UC06 446 aaPredicted RBP25.78■■□□□ 1.72
SIX3-201ENST00000260653 TTLL1O95922 423 aa25.77■■□□□ 1.72
SIX3-201ENST00000260653 CCDC17Q96LX7 622 aa25.77■■□□□ 1.72
SIX3-201ENST00000260653 TRIM34Q9BYJ4 488 aa25.77■■□□□ 1.72
SIX3-201ENST00000260653 USP17L5A8MUK1 530 aa25.77■■□□□ 1.72
SIX3-201ENST00000260653 NPY5RQ15761 445 aa25.77■■□□□ 1.72
SIX3-201ENST00000260653 FOXP4Q8IVH2 680 aaPredicted RBP25.76■■□□□ 1.71
SIX3-201ENST00000260653 CCAR1Q8IX12 1150 aaKnown RBP25.76■■□□□ 1.71
SIX3-201ENST00000260653 CSRNP1Q96S65 589 aa25.76■■□□□ 1.71
SIX3-201ENST00000260653 GOLPH3LQ9H4A5 285 aa25.76■■□□□ 1.71
SIX3-201ENST00000260653 COL2A1P02458 1487 aaPredicted RBP25.76■■□□□ 1.71
SIX3-201ENST00000260653 SHTN1A0MZ66 631 aa25.76■■□□□ 1.71
SIX3-201ENST00000260653 PDHBP11177 359 aa25.76■■□□□ 1.71
SIX3-201ENST00000260653 KRT2P35908 639 aa25.76■■□□□ 1.71
SIX3-201ENST00000260653 TOB1P50616 345 aaPredicted RBP25.76■■□□□ 1.71
SIX3-201ENST00000260653 CERKLQ49MI3 558 aaPredicted RBP25.76■■□□□ 1.71
SIX3-201ENST00000260653 GPKOWQ92917 476 aaPredicted RBP eCLIP25.76■■□□□ 1.71
SIX3-201ENST00000260653 MYH4Q9Y623 1939 aa25.76■■□□□ 1.71
SIX3-201ENST00000260653 PRELPP51888 382 aa25.75■■□□□ 1.71
SIX3-201ENST00000260653 SLC39A14Q15043 492 aa25.75■■□□□ 1.71
SIX3-201ENST00000260653 SPDYE2Q495Y8 402 aa25.75■■□□□ 1.71
SIX3-201ENST00000260653 TATDN1Q6P1N9 297 aa25.75■■□□□ 1.71
SIX3-201ENST00000260653 PTPAQ15257 358 aa25.75■■□□□ 1.71
SIX3-201ENST00000260653 METTL16Q86W50 562 aaKnown RBP25.75■■□□□ 1.71
SIX3-201ENST00000260653 PANK2Q9BZ23 570 aa25.75■■□□□ 1.71
SIX3-201ENST00000260653 NUP62CLQ9H1M0 184 aa25.75■■□□□ 1.71
SIX3-201ENST00000260653 LTBP3Q9NS15 1303 aa25.74■■□□□ 1.71
SIX3-201ENST00000260653 FAM205CA6NFA0 338 aa25.74■■□□□ 1.71
SIX3-201ENST00000260653 CAMK4Q16566 473 aa25.74■■□□□ 1.71
SIX3-201ENST00000260653 LZTS2Q9BRK4 669 aa25.74■■□□□ 1.71
SIX3-201ENST00000260653 ARFGEF1Q9Y6D6 1849 aa25.74■■□□□ 1.71
SIX3-201ENST00000260653 MARCKSP29966 332 aaPredicted RBP25.74■■□□□ 1.71
SIX3-201ENST00000260653 ATP2B2Q01814 1243 aa25.74■■□□□ 1.71
SIX3-201ENST00000260653 ADALQ6DHV7 355 aa25.74■■□□□ 1.71
SIX3-201ENST00000260653 MTMR14Q8NCE2 650 aa25.74■■□□□ 1.71
SIX3-201ENST00000260653 SPZ1Q9BXG8 430 aa25.74■■□□□ 1.71
SIX3-201ENST00000260653 RBSNQ9H1K0 784 aa25.74■■□□□ 1.71
SIX3-201ENST00000260653 VEZTQ9HBM0 779 aa25.74■■□□□ 1.71
SIX3-201ENST00000260653 CABP5Q9NP86 173 aa25.74■■□□□ 1.71
SIX3-201ENST00000260653 DDX19AQ9NUU7 478 aaKnown RBP25.74■■□□□ 1.71
SIX3-201ENST00000260653 FRMPD2Q68DX3 1309 aaPredicted RBP25.73■■□□□ 1.71
SIX3-201ENST00000260653 LETM1O95202 739 aaPredicted RBP25.73■■□□□ 1.71
SIX3-201ENST00000260653 EARS2Q5JPH6 523 aaKnown RBP25.73■■□□□ 1.71
SIX3-201ENST00000260653 SRCAPQ6ZRS2 3230 aa25.73■■□□□ 1.71
SIX3-201ENST00000260653 CNTNAP1P78357 1384 aa25.73■■□□□ 1.71
SIX3-201ENST00000260653 RILPL1Q5EBL4 403 aa25.73■■□□□ 1.71
SIX3-201ENST00000260653 FSIP1Q8NA03 581 aa25.73■■□□□ 1.71
SIX3-201ENST00000260653 GDF11O95390 407 aa25.72■■□□□ 1.71
SIX3-201ENST00000260653 NLRP5P59047 1200 aa25.72■■□□□ 1.71
SIX3-201ENST00000260653 TNIP1Q15025 636 aa25.72■■□□□ 1.71
SIX3-201ENST00000260653 BRMS1Q9HCU9 246 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms