RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 USP4Q13107 963 aa7.46□□□□□ -1.22
PDGFRA-201ENST00000257290 RASA3Q14644 834 aa7.46□□□□□ -1.22
PDGFRA-201ENST00000257290 RRS1Q15050 365 aaKnown RBP7.46□□□□□ -1.22
PDGFRA-201ENST00000257290 CUL5Q93034 780 aa7.46□□□□□ -1.22
PDGFRA-201ENST00000257290 TESK2Q96S53 571 aa7.46□□□□□ -1.22
PDGFRA-201ENST00000257290 PHF8Q9UPP1 1060 aa7.46□□□□□ -1.22
PDGFRA-201ENST00000257290 PPIP5K1Q6PFW1 1433 aa7.46□□□□□ -1.22
PDGFRA-201ENST00000257290 IQGAP3Q86VI3 1631 aa7.46□□□□□ -1.22
PDGFRA-201ENST00000257290 TTC21AQ8NDW8 1320 aa7.46□□□□□ -1.22
PDGFRA-201ENST00000257290 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.46□□□□□ -1.22
PDGFRA-201ENST00000257290 MEFVO15553 781 aaPredicted RBP7.46□□□□□ -1.22
PDGFRA-201ENST00000257290 CYTH3O43739 400 aa7.46□□□□□ -1.22
PDGFRA-201ENST00000257290 ZNF75DP51815 510 aa7.46□□□□□ -1.22
PDGFRA-201ENST00000257290 RALYLQ86SE5 291 aaKnown RBP7.46□□□□□ -1.22
PDGFRA-201ENST00000257290 IQUBQ8NA54 791 aa7.46□□□□□ -1.22
PDGFRA-201ENST00000257290 WDR60Q8WVS4 1066 aa7.46□□□□□ -1.22
PDGFRA-201ENST00000257290 GIMAP4Q9NUV9 329 aa7.46□□□□□ -1.22
PDGFRA-201ENST00000257290 TMED5Q9Y3A6 229 aa7.46□□□□□ -1.22
PDGFRA-201ENST00000257290 MYOM2P54296 1465 aa7.46□□□□□ -1.22
PDGFRA-201ENST00000257290 OLR1P78380 273 aa7.46□□□□□ -1.22
PDGFRA-201ENST00000257290 DHX9Q08211 1270 aaKnown RBP7.46□□□□□ -1.22
PDGFRA-201ENST00000257290 SNX1Q13596 522 aa7.46□□□□□ -1.22
PDGFRA-201ENST00000257290 SF3B3Q15393 1217 aaKnown RBP7.46□□□□□ -1.22
PDGFRA-201ENST00000257290 TRIM50Q86XT4 487 aa7.46□□□□□ -1.22
PDGFRA-201ENST00000257290 ARHGAP24Q8N264 748 aa7.46□□□□□ -1.22
PDGFRA-201ENST00000257290 EFHD2Q96C19 240 aaPredicted RBP7.46□□□□□ -1.22
PDGFRA-201ENST00000257290 ZCCHC17Q9NP64 241 aaKnown RBP7.46□□□□□ -1.22
PDGFRA-201ENST00000257290 SPG7Q9UQ90 795 aa7.46□□□□□ -1.22
PDGFRA-201ENST00000257290 NUGGCQ68CJ6 796 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 NCAPG2Q86XI2 1143 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 NME9Q86XW9 330 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 ERMNQ8TAM6 284 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 ZSCAN16Q9H4T2 348 aaPredicted RBP7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 C10orf88Q9H8K7 445 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 UNC13BO14795 1591 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 PTPRCP08575 1304 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 TBC1D12O60347 775 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 TRPA1O75762 1119 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 PMS2P54278 862 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 MTTPP55157 894 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 THEMIS2Q5TEJ8 643 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 PANK1Q8TE04 598 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 IQCDQ96DY2 449 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 OMA1Q96E52 524 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 ARHGEF10LQ9HCE6 1279 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 A1CFQ9NQ94 594 aaKnown RBP7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 C9orf78Q9NZ63 289 aaPredicted RBP7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 INTUQ9ULD6 942 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 TTC41PQ6P2S7 1318 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 TMPOP42166 694 aaKnown RBP7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 PDE6CP51160 858 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 LMBRD1Q9NUN5 540 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 MTRF1LQ9UGC7 380 aaKnown RBP7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 LCMT1Q9UIC8 334 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 PIK3C2GO75747 1445 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 NPATQ14207 1427 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 PRC1O43663 620 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 PYGBP11216 843 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 NDUFA5Q16718 116 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 TAF4BQ92750 862 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 EURLQ9NYK6 297 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 NKTRP30414 1462 aaKnown RBP7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 TET3O43151 1660 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 GOLGA8AA7E2F4 631 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 SART1O43290 800 aaKnown RBP7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 PDHA1P08559 390 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 SYT1P21579 422 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 CCDC102BQ68D86 513 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 ARHGEF25Q86VW2 580 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 SUN5Q8TC36 379 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 NLRP4Q96MN2 994 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 ZBED2Q9BTP6 218 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 LRRC27Q9C0I9 530 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 Q9H521 79 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 DNAAF2Q9NVR5 837 aaKnown RBP7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 KIAA1468Q9P260 1216 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 ATXN10Q9UBB4 475 aa7.45□□□□□ -1.22
PDGFRA-201ENST00000257290 B3GALNT1O75752 331 aa7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 GSTA2P09210 222 aa7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 HARSP12081 509 aaKnown RBP7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 ETF1P62495 437 aaKnown RBP7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 PHEXP78562 749 aa7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 TYRO3Q06418 890 aa7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 PRPF40BQ6NWY9 871 aaKnown RBP7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 MYO1HQ8N1T3 1032 aa7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 NSMCE1Q8WV22 266 aa7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 ANTXR1Q9H6X2 564 aa7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 ZFYVE9O95405 1425 aa7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 CCDC144BQ3MJ40 725 aa7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 PRR16Q569H4 304 aa7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 KLC3Q6P597 504 aa7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 CALML6Q8TD86 181 aa7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 RSPH1Q8WYR4 309 aa7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 DHTKD1Q96HY7 919 aaPredicted RBP7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 PARD6BQ9BYG5 372 aa7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 CARD9Q9H257 536 aa7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 FBXO2Q9UK22 296 aaPredicted RBP7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 RPS6KL1Q9Y6S9 549 aa7.44□□□□□ -1.22
PDGFRA-201ENST00000257290 PTPRTO14522 1441 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms