RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 MKNK2Q9HBH9 465 aa15.28■□□□□ 0.04
VHL-201ENST00000256474 USP17L8P0C7I0 530 aa15.28■□□□□ 0.04
VHL-201ENST00000256474 EIF5P55010 431 aaKnown RBP15.28■□□□□ 0.04
VHL-201ENST00000256474 RASGRP2Q7LDG7 609 aa15.28■□□□□ 0.04
VHL-201ENST00000256474 SRBD1Q8N5C6 995 aaKnown RBP15.28■□□□□ 0.04
VHL-201ENST00000256474 COL5A2P05997 1499 aaPredicted RBP15.28■□□□□ 0.04
VHL-201ENST00000256474 DDB1Q16531 1140 aa15.27■□□□□ 0.04
VHL-201ENST00000256474 NCAPH2Q6IBW4 605 aa15.27■□□□□ 0.04
VHL-201ENST00000256474 DZIP1Q86YF9 867 aaKnown RBP15.27■□□□□ 0.04
VHL-201ENST00000256474 IQUBQ8NA54 791 aa15.27■□□□□ 0.04
VHL-201ENST00000256474 TRIM47Q96LD4 638 aa15.27■□□□□ 0.04
VHL-201ENST00000256474 PSMB7Q99436 277 aa15.27■□□□□ 0.04
VHL-201ENST00000256474 VPS18Q9P253 973 aa15.27■□□□□ 0.04
VHL-201ENST00000256474 LOC102724428A0A0B4J2F2 783 aa15.27■□□□□ 0.03
VHL-201ENST00000256474 CCDC194A0A1B0GVG4 234 aa15.27■□□□□ 0.03
VHL-201ENST00000256474 FAM170AA1A519 330 aa15.27■□□□□ 0.03
VHL-201ENST00000256474 SIK1P57059 783 aa15.27■□□□□ 0.03
VHL-201ENST00000256474 ZNF34Q8IZ26 560 aa15.27■□□□□ 0.03
VHL-201ENST00000256474 PPARDQ03181 441 aa15.27■□□□□ 0.03
VHL-201ENST00000256474 NR1I3Q14994 352 aa15.27■□□□□ 0.03
VHL-201ENST00000256474 KRT31Q15323 416 aa15.27■□□□□ 0.03
VHL-201ENST00000256474 ALX1Q15699 326 aa15.27■□□□□ 0.03
VHL-201ENST00000256474 PKN1Q16512 942 aa15.27■□□□□ 0.03
VHL-201ENST00000256474 CCDC178Q5BJE1 867 aa15.27■□□□□ 0.03
VHL-201ENST00000256474 PCNTO95613 3336 aa15.26■□□□□ 0.03
VHL-201ENST00000256474 TXLNAP40222 546 aa15.26■□□□□ 0.03
VHL-201ENST00000256474 ENOX2Q16206 610 aaKnown RBP15.26■□□□□ 0.03
VHL-201ENST00000256474 CC2D1AQ6P1N0 951 aaPredicted RBP15.26■□□□□ 0.03
VHL-201ENST00000256474 SLC44A5Q8NCS7 719 aa15.26■□□□□ 0.03
VHL-201ENST00000256474 CHP1Q99653 195 aa15.26■□□□□ 0.03
VHL-201ENST00000256474 SRRTQ9BXP5 876 aaKnown RBP15.26■□□□□ 0.03
VHL-201ENST00000256474 ADGRG1Q9Y653 693 aa15.26■□□□□ 0.03
VHL-201ENST00000256474 CTAGE9A4FU28 777 aa15.26■□□□□ 0.03
VHL-201ENST00000256474 ZNF18P17022 549 aa15.26■□□□□ 0.03
VHL-201ENST00000256474 UBA7P41226 1012 aa15.26■□□□□ 0.03
VHL-201ENST00000256474 INF2Q27J81 1249 aa15.26■□□□□ 0.03
VHL-201ENST00000256474 RGS22Q8NE09 1264 aa15.26■□□□□ 0.03
VHL-201ENST00000256474 CAGE1Q8TC20 777 aa15.26■□□□□ 0.03
VHL-201ENST00000256474 RNF26Q9BY78 433 aaPredicted RBP15.26■□□□□ 0.03
VHL-201ENST00000256474 PLEKHA4Q9H4M7 779 aa15.26■□□□□ 0.03
VHL-201ENST00000256474 KAT14Q9H8E8 782 aa15.26■□□□□ 0.03
VHL-201ENST00000256474 MRFAP1Q9Y605 127 aa15.26■□□□□ 0.03
VHL-201ENST00000256474 RNF225M0QZC1 329 aaPredicted RBP15.26■□□□□ 0.03
VHL-201ENST00000256474 SRGAP2O75044 1071 aa15.26■□□□□ 0.03
VHL-201ENST00000256474 MATR3P43243 847 aaKnown RBP eCLIP15.26■□□□□ 0.03
VHL-201ENST00000256474 TFAP4Q01664 338 aa15.26■□□□□ 0.03
VHL-201ENST00000256474 HDAC6Q9UBN7 1215 aa15.26■□□□□ 0.03
VHL-201ENST00000256474 RTL9Q8NET4 1388 aa15.25■□□□□ 0.03
VHL-201ENST00000256474 SIPA1L3O60292 1781 aaPredicted RBP15.25■□□□□ 0.03
VHL-201ENST00000256474 GOLGA6L9A6NEM1 432 aa15.25■□□□□ 0.03
VHL-201ENST00000256474 ITPK1Q13572 414 aa15.25■□□□□ 0.03
VHL-201ENST00000256474 KIAA1328Q86T90 577 aa15.25■□□□□ 0.03
VHL-201ENST00000256474 STAG2Q8N3U4 1231 aa15.25■□□□□ 0.03
VHL-201ENST00000256474 TRIM34Q9BYJ4 488 aa15.25■□□□□ 0.03
VHL-201ENST00000256474 PDE11AQ9HCR9 933 aa15.25■□□□□ 0.03
VHL-201ENST00000256474 STK36Q9NRP7 1315 aa15.25■□□□□ 0.03
VHL-201ENST00000256474 USP17L3A6NCW0 530 aa15.25■□□□□ 0.03
VHL-201ENST00000256474 USP17L4A6NCW7 530 aa15.25■□□□□ 0.03
VHL-201ENST00000256474 PAK1Q13153 545 aa15.25■□□□□ 0.03
VHL-201ENST00000256474 LONRF2Q1L5Z9 754 aa15.25■□□□□ 0.03
VHL-201ENST00000256474 CTR9Q6PD62 1173 aa15.25■□□□□ 0.03
VHL-201ENST00000256474 USP17L1Q7RTZ2 530 aa15.25■□□□□ 0.03
VHL-201ENST00000256474 HPS3Q969F9 1004 aa15.25■□□□□ 0.03
VHL-201ENST00000256474 KCNJ18B7U540 433 aa15.25■□□□□ 0.03
VHL-201ENST00000256474 MAP3K9P80192 1104 aa15.25■□□□□ 0.03
VHL-201ENST00000256474 KCNJ12Q14500 433 aa15.25■□□□□ 0.03
VHL-201ENST00000256474 RABEP2Q9H5N1 569 aa15.25■□□□□ 0.03
VHL-201ENST00000256474 ANKIB1Q9P2G1 1089 aa15.25■□□□□ 0.03
VHL-201ENST00000256474 KCPQ6ZWJ8 1503 aa15.24■□□□□ 0.03
VHL-201ENST00000256474 MACROD2A1Z1Q3 448 aa15.24■□□□□ 0.03
VHL-201ENST00000256474 GYPCP04921 128 aa15.24■□□□□ 0.03
VHL-201ENST00000256474 HNRNPH2P55795 449 aaKnown RBP15.24■□□□□ 0.03
VHL-201ENST00000256474 MECOMQ03112 1051 aa15.24■□□□□ 0.03
VHL-201ENST00000256474 DIXDC1Q155Q3 683 aa15.24■□□□□ 0.03
VHL-201ENST00000256474 MAGEC2Q9UBF1 373 aaPredicted RBP15.24■□□□□ 0.03
VHL-201ENST00000256474 A0A1B0GTH6 734 aa15.24■□□□□ 0.03
VHL-201ENST00000256474 MFAP3LO75121 409 aa15.24■□□□□ 0.03
VHL-201ENST00000256474 TBC1D8O95759 1140 aa15.24■□□□□ 0.03
VHL-201ENST00000256474 SCG2P13521 617 aa15.24■□□□□ 0.03
VHL-201ENST00000256474 TBX2Q13207 712 aaPredicted RBP15.24■□□□□ 0.03
VHL-201ENST00000256474 LETM2Q2VYF4 491 aa15.24■□□□□ 0.03
VHL-201ENST00000256474 GPR161Q8N6U8 529 aaKnown RBP15.24■□□□□ 0.03
VHL-201ENST00000256474 ADD3Q9UEY8 706 aaKnown RBP15.24■□□□□ 0.03
VHL-201ENST00000256474 VGLL3A8MV65 326 aa15.23■□□□□ 0.03
VHL-201ENST00000256474 TRIM21P19474 475 aaKnown RBP15.23■□□□□ 0.03
VHL-201ENST00000256474 ERCC5P28715 1186 aaPredicted RBP15.23■□□□□ 0.03
VHL-201ENST00000256474 SARSP49591 514 aaKnown RBP15.23■□□□□ 0.03
VHL-201ENST00000256474 SEC23AQ15436 765 aa15.23■□□□□ 0.03
VHL-201ENST00000256474 SRP68Q9UHB9 627 aaKnown RBP15.23■□□□□ 0.03
VHL-201ENST00000256474 NWD2Q9ULI1 1742 aa15.23■□□□□ 0.03
VHL-201ENST00000256474 ABCC6O95255 1503 aa15.23■□□□□ 0.03
VHL-201ENST00000256474 ANKRD65E5RJM6 399 aa15.23■□□□□ 0.03
VHL-201ENST00000256474 N4BP1O75113 896 aaKnown RBP15.23■□□□□ 0.03
VHL-201ENST00000256474 PRCPP42785 496 aa15.23■□□□□ 0.03
VHL-201ENST00000256474 COPB1P53618 953 aaKnown RBP15.23■□□□□ 0.03
VHL-201ENST00000256474 ZNF512BQ96KM6 892 aaPredicted RBP15.23■□□□□ 0.03
VHL-201ENST00000256474 PHF20Q9BVI0 1012 aa15.23■□□□□ 0.03
VHL-201ENST00000256474 CRNKL1Q9BZJ0 848 aaKnown RBP15.23■□□□□ 0.03
VHL-201ENST00000256474 XDHP47989 1333 aa15.23■□□□□ 0.03
VHL-201ENST00000256474 PPP1R3GB7ZBB8 358 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms