RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 CDR1P51861 262 aa13.36□□□□□ -0.27
CCNA1-201ENST00000255465 FOXO4P98177 505 aa13.36□□□□□ -0.27
CCNA1-201ENST00000255465 SNCBQ16143 134 aa13.36□□□□□ -0.27
CCNA1-201ENST00000255465 SLC51AQ86UW1 340 aa13.36□□□□□ -0.27
CCNA1-201ENST00000255465 ZNF396Q96N95 335 aaPredicted RBP13.36□□□□□ -0.27
CCNA1-201ENST00000255465 SLX1AQ9BQ83 275 aa13.36□□□□□ -0.27
CCNA1-201ENST00000255465 MAF1Q9H063 256 aa13.36□□□□□ -0.27
CCNA1-201ENST00000255465 GOPCQ9HD26 462 aa13.36□□□□□ -0.27
CCNA1-201ENST00000255465 ERICH2A1L162 156 aa13.36□□□□□ -0.27
CCNA1-201ENST00000255465 ZSCAN9O15535 394 aaPredicted RBP13.36□□□□□ -0.27
CCNA1-201ENST00000255465 CSF1RP07333 972 aa13.36□□□□□ -0.27
CCNA1-201ENST00000255465 MCM3P25205 808 aa13.36□□□□□ -0.27
CCNA1-201ENST00000255465 GCLCP48506 637 aaPredicted RBP13.36□□□□□ -0.27
CCNA1-201ENST00000255465 GREM2Q9H772 168 aa13.36□□□□□ -0.27
CCNA1-201ENST00000255465 ATP6V0A2Q9Y487 856 aa13.36□□□□□ -0.27
CCNA1-201ENST00000255465 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.36□□□□□ -0.27
CCNA1-201ENST00000255465 SNED1Q8TER0 1413 aa13.35□□□□□ -0.27
CCNA1-201ENST00000255465 RTL9Q8NET4 1388 aa13.35□□□□□ -0.27
CCNA1-201ENST00000255465 GOLGA6L10A6NI86 522 aa13.35□□□□□ -0.27
CCNA1-201ENST00000255465 MEFVO15553 781 aaPredicted RBP13.35□□□□□ -0.27
CCNA1-201ENST00000255465 PPFIA3O75145 1194 aa13.35□□□□□ -0.27
CCNA1-201ENST00000255465 SFPQP23246 707 aaKnown RBP eCLIP13.35□□□□□ -0.27
CCNA1-201ENST00000255465 RPS8P62241 208 aaKnown RBP13.35□□□□□ -0.27
CCNA1-201ENST00000255465 RASA3Q14644 834 aa13.35□□□□□ -0.27
CCNA1-201ENST00000255465 EPHA10Q5JZY3 1008 aa13.35□□□□□ -0.27
CCNA1-201ENST00000255465 DNAJC14Q6Y2X3 702 aaPredicted RBP13.35□□□□□ -0.27
CCNA1-201ENST00000255465 SP8Q8IXZ3 490 aa13.35□□□□□ -0.27
CCNA1-201ENST00000255465 RTKN2Q8IZC4 609 aa13.35□□□□□ -0.27
CCNA1-201ENST00000255465 PARD3BQ8TEW8 1205 aa13.35□□□□□ -0.27
CCNA1-201ENST00000255465 EZH1Q92800 747 aaPredicted RBP13.35□□□□□ -0.27
CCNA1-201ENST00000255465 SUCLG2Q96I99 432 aa13.35□□□□□ -0.27
CCNA1-201ENST00000255465 ACTR5Q9H9F9 607 aaPredicted RBP13.35□□□□□ -0.27
CCNA1-201ENST00000255465 LTBP3Q9NS15 1303 aa13.34□□□□□ -0.27
CCNA1-201ENST00000255465 FIBPO43427 364 aa13.34□□□□□ -0.27
CCNA1-201ENST00000255465 OPA1O60313 960 aa13.34□□□□□ -0.27
CCNA1-201ENST00000255465 ZEB2O60315 1214 aa13.34□□□□□ -0.27
CCNA1-201ENST00000255465 FERP16591 822 aa13.34□□□□□ -0.27
CCNA1-201ENST00000255465 PRELPP51888 382 aa13.34□□□□□ -0.27
CCNA1-201ENST00000255465 ROR2Q01974 943 aaKnown RBP13.34□□□□□ -0.27
CCNA1-201ENST00000255465 PPFIA1Q13136 1202 aa13.34□□□□□ -0.27
CCNA1-201ENST00000255465 GNL2Q13823 731 aaKnown RBP13.34□□□□□ -0.27
CCNA1-201ENST00000255465 NAA25Q14CX7 972 aa13.34□□□□□ -0.27
CCNA1-201ENST00000255465 IFFO2Q5TF58 517 aa13.34□□□□□ -0.27
CCNA1-201ENST00000255465 CWF19L1Q69YN2 538 aaKnown RBP13.34□□□□□ -0.27
CCNA1-201ENST00000255465 SDR16C5Q8N3Y7 309 aa13.34□□□□□ -0.27
CCNA1-201ENST00000255465 KAZALD1Q96I82 304 aa13.34□□□□□ -0.27
CCNA1-201ENST00000255465 TAOK3Q9H2K8 898 aa13.34□□□□□ -0.27
CCNA1-201ENST00000255465 VCPKMTQ9H867 229 aa13.34□□□□□ -0.27
CCNA1-201ENST00000255465 CD248Q9HCU0 757 aa13.34□□□□□ -0.27
CCNA1-201ENST00000255465 CORO1CQ9ULV4 474 aaPredicted RBP13.34□□□□□ -0.27
CCNA1-201ENST00000255465 GOLGA6L7A0A1B0GV03 622 aa13.33□□□□□ -0.27
CCNA1-201ENST00000255465 ANKRD65E5RJM6 399 aa13.33□□□□□ -0.27
CCNA1-201ENST00000255465 PRPF6O94906 941 aaKnown RBP13.33□□□□□ -0.27
CCNA1-201ENST00000255465 GNAI3P08754 354 aa13.33□□□□□ -0.27
CCNA1-201ENST00000255465 SYT1P21579 422 aa13.33□□□□□ -0.27
CCNA1-201ENST00000255465 YY1P25490 414 aa13.33□□□□□ -0.27
CCNA1-201ENST00000255465 CCT5P48643 541 aa13.33□□□□□ -0.27
CCNA1-201ENST00000255465 KRT85P78386 507 aa13.33□□□□□ -0.27
CCNA1-201ENST00000255465 STX1AQ16623 288 aa13.33□□□□□ -0.27
CCNA1-201ENST00000255465 LMBR1LQ6UX01 489 aa13.33□□□□□ -0.27
CCNA1-201ENST00000255465 TMC4Q7Z404 712 aa13.33□□□□□ -0.27
CCNA1-201ENST00000255465 FAM81AQ8TBF8 368 aa13.33□□□□□ -0.27
CCNA1-201ENST00000255465 LMBR1Q8WVP7 490 aa13.33□□□□□ -0.27
CCNA1-201ENST00000255465 CCDC47Q96A33 483 aaKnown RBP13.33□□□□□ -0.27
CCNA1-201ENST00000255465 SPDL1Q96EA4 605 aa13.33□□□□□ -0.27
CCNA1-201ENST00000255465 SUN2Q9UH99 717 aa13.33□□□□□ -0.27
CCNA1-201ENST00000255465 TIAM2Q8IVF5 1701 aa13.33□□□□□ -0.27
CCNA1-201ENST00000255465 SRRM3A6NNA2 597 aaPredicted RBP13.33□□□□□ -0.28
CCNA1-201ENST00000255465 LMNB1P20700 586 aa13.33□□□□□ -0.28
CCNA1-201ENST00000255465 ITGA6P23229 1130 aa13.33□□□□□ -0.28
CCNA1-201ENST00000255465 GBP2P32456 591 aaPredicted RBP13.33□□□□□ -0.28
CCNA1-201ENST00000255465 FKBP4Q02790 459 aaKnown RBP eCLIP13.33□□□□□ -0.28
CCNA1-201ENST00000255465 CASP8Q14790 479 aa13.33□□□□□ -0.28
CCNA1-201ENST00000255465 C9orf131Q5VYM1 1079 aa13.33□□□□□ -0.28
CCNA1-201ENST00000255465 SLC30A9Q6PML9 568 aa13.33□□□□□ -0.28
CCNA1-201ENST00000255465 PIK3R5Q8WYR1 880 aa13.33□□□□□ -0.28
CCNA1-201ENST00000255465 AGAP3Q96P47 875 aa13.33□□□□□ -0.28
CCNA1-201ENST00000255465 ALS2CR12Q96Q35 445 aa13.33□□□□□ -0.28
CCNA1-201ENST00000255465 CDC5LQ99459 802 aaKnown RBP13.33□□□□□ -0.28
CCNA1-201ENST00000255465 IRX2Q9BZI1 471 aaPredicted RBP13.33□□□□□ -0.28
CCNA1-201ENST00000255465 SCAND2PQ9GZW5 306 aaPredicted RBP13.33□□□□□ -0.28
CCNA1-201ENST00000255465 UBA5Q9GZZ9 404 aa13.33□□□□□ -0.28
CCNA1-201ENST00000255465 LMCD1Q9NZU5 365 aa13.33□□□□□ -0.28
CCNA1-201ENST00000255465 ZBTB7BO15156 539 aaPredicted RBP13.32□□□□□ -0.28
CCNA1-201ENST00000255465 ACTN3Q08043 901 aaPredicted RBP13.32□□□□□ -0.28
CCNA1-201ENST00000255465 LAMB3Q13751 1172 aa13.32□□□□□ -0.28
CCNA1-201ENST00000255465 MYBPC2Q14324 1141 aa13.32□□□□□ -0.28
CCNA1-201ENST00000255465 CAPRIN2Q6IMN6 1127 aaKnown RBP13.32□□□□□ -0.28
CCNA1-201ENST00000255465 SRGAP1Q7Z6B7 1085 aa13.32□□□□□ -0.28
CCNA1-201ENST00000255465 SPDYE1Q8NFV5 336 aaPredicted RBP13.32□□□□□ -0.28
CCNA1-201ENST00000255465 CCDC102AQ96A19 550 aa13.32□□□□□ -0.28
CCNA1-201ENST00000255465 RNF181Q9P0P0 153 aa13.32□□□□□ -0.28
CCNA1-201ENST00000255465 DDX20Q9UHI6 824 aaKnown RBP13.32□□□□□ -0.28
CCNA1-201ENST00000255465 CHMP3Q9Y3E7 222 aa13.32□□□□□ -0.28
CCNA1-201ENST00000255465 LTBP1Q14766 1721 aa13.32□□□□□ -0.28
CCNA1-201ENST00000255465 RNF40O75150 1001 aa13.31□□□□□ -0.28
CCNA1-201ENST00000255465 NAP1L1P55209 391 aaKnown RBP13.31□□□□□ -0.28
CCNA1-201ENST00000255465 CCDC40Q4G0X9 1142 aa13.31□□□□□ -0.28
CCNA1-201ENST00000255465 CCDC178Q5BJE1 867 aa13.31□□□□□ -0.28
CCNA1-201ENST00000255465 TRIM58Q8NG06 486 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms