RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 RGS22Q8NE09 1264 aa21.85■■□□□ 1.09
TRIM47-201ENST00000254816 PI4KBQ9UBF8 816 aa21.85■■□□□ 1.09
TRIM47-201ENST00000254816 AGBL3Q8NEM8 1001 aa21.84■■□□□ 1.09
TRIM47-201ENST00000254816 ANP32BQ92688 251 aaKnown RBP21.84■■□□□ 1.09
TRIM47-201ENST00000254816 MTMR4Q9NYA4 1195 aa21.84■■□□□ 1.09
TRIM47-201ENST00000254816 CLIC4Q9Y696 253 aa21.84■■□□□ 1.09
TRIM47-201ENST00000254816 BTBD18B2RXH4 712 aa21.83■■□□□ 1.09
TRIM47-201ENST00000254816 TOP1P11387 765 aaKnown RBP21.83■■□□□ 1.09
TRIM47-201ENST00000254816 VEGFAP15692 232 aaPredicted RBP21.83■■□□□ 1.09
TRIM47-201ENST00000254816 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.83■■□□□ 1.09
TRIM47-201ENST00000254816 IGKV6D-41A0A0C4DH26 115 aa21.83■■□□□ 1.09
TRIM47-201ENST00000254816 NPM3O75607 178 aaKnown RBP21.83■■□□□ 1.09
TRIM47-201ENST00000254816 DIS3L2Q8IYB7 885 aaKnown RBP21.83■■□□□ 1.09
TRIM47-201ENST00000254816 PPP1R9BQ96SB3 815 aa21.83■■□□□ 1.09
TRIM47-201ENST00000254816 MAP3K14Q99558 947 aa21.83■■□□□ 1.09
TRIM47-201ENST00000254816 ZNF70Q9UC06 446 aaPredicted RBP21.83■■□□□ 1.09
TRIM47-201ENST00000254816 RCOR1Q9UKL0 485 aa21.83■■□□□ 1.09
TRIM47-201ENST00000254816 ESPNB1AK53 854 aa21.82■■□□□ 1.08
TRIM47-201ENST00000254816 NOVP48745 357 aa21.82■■□□□ 1.08
TRIM47-201ENST00000254816 LRRC47Q8N1G4 583 aaKnown RBP21.82■■□□□ 1.08
TRIM47-201ENST00000254816 CPVLQ9H3G5 476 aa21.82■■□□□ 1.08
TRIM47-201ENST00000254816 GOLGA6L4A6NEF3 574 aa21.82■■□□□ 1.08
TRIM47-201ENST00000254816 ENTPD3O75355 529 aa21.82■■□□□ 1.08
TRIM47-201ENST00000254816 U2AF2P26368 475 aaKnown RBP eCLIP21.82■■□□□ 1.08
TRIM47-201ENST00000254816 SLC35G1Q2M3R5 365 aa21.82■■□□□ 1.08
TRIM47-201ENST00000254816 ATL3Q6DD88 541 aa21.82■■□□□ 1.08
TRIM47-201ENST00000254816 USP17L2Q6R6M4 530 aa21.82■■□□□ 1.08
TRIM47-201ENST00000254816 OXER1Q8TDS5 423 aa21.82■■□□□ 1.08
TRIM47-201ENST00000254816 TMOD2Q9NZR1 351 aa21.82■■□□□ 1.08
TRIM47-201ENST00000254816 LIG1P18858 919 aa21.81■■□□□ 1.08
TRIM47-201ENST00000254816 NR5A1Q13285 461 aa21.81■■□□□ 1.08
TRIM47-201ENST00000254816 TRIM34Q9BYJ4 488 aa21.81■■□□□ 1.08
TRIM47-201ENST00000254816 VEZTQ9HBM0 779 aa21.81■■□□□ 1.08
TRIM47-201ENST00000254816 CLIP2Q9UDT6 1046 aa21.81■■□□□ 1.08
TRIM47-201ENST00000254816 PALM3A6NDB9 673 aaPredicted RBP21.81■■□□□ 1.08
TRIM47-201ENST00000254816 SAFBQ15424 915 aaKnown RBP eCLIP21.81■■□□□ 1.08
TRIM47-201ENST00000254816 SPON1Q9HCB6 807 aa21.81■■□□□ 1.08
TRIM47-201ENST00000254816 RTEL1Q9NZ71 1219 aa21.81■■□□□ 1.08
TRIM47-201ENST00000254816 USP17L5A8MUK1 530 aa21.8■■□□□ 1.08
TRIM47-201ENST00000254816 CSRNP1Q96S65 589 aa21.8■■□□□ 1.08
TRIM47-201ENST00000254816 CYTH3O43739 400 aa21.8■■□□□ 1.08
TRIM47-201ENST00000254816 ATP2B2Q01814 1243 aa21.8■■□□□ 1.08
TRIM47-201ENST00000254816 NBPF9Q3BBW0 867 aa21.8■■□□□ 1.08
TRIM47-201ENST00000254816 SPDYE2Q495Y8 402 aa21.8■■□□□ 1.08
TRIM47-201ENST00000254816 CERKLQ49MI3 558 aaPredicted RBP21.8■■□□□ 1.08
TRIM47-201ENST00000254816 SYAP1Q96A49 352 aaPredicted RBP21.8■■□□□ 1.08
TRIM47-201ENST00000254816 ATRNL1Q5VV63 1379 aa21.8■■□□□ 1.08
TRIM47-201ENST00000254816 SCG2P13521 617 aa21.79■■□□□ 1.08
TRIM47-201ENST00000254816 FOXP4Q8IVH2 680 aaPredicted RBP21.79■■□□□ 1.08
TRIM47-201ENST00000254816 NOSTRINQ8IVI9 506 aa21.79■■□□□ 1.08
TRIM47-201ENST00000254816 RNF214Q8ND24 703 aa21.79■■□□□ 1.08
TRIM47-201ENST00000254816 BICD2Q8TD16 824 aa21.79■■□□□ 1.08
TRIM47-201ENST00000254816 PHF20Q9BVI0 1012 aa21.79■■□□□ 1.08
TRIM47-201ENST00000254816 SCAF8Q9UPN6 1271 aaKnown RBP21.79■■□□□ 1.08
TRIM47-201ENST00000254816 LTBP3Q9NS15 1303 aa21.79■■□□□ 1.08
TRIM47-201ENST00000254816 CNTNAP1P78357 1384 aa21.79■■□□□ 1.08
TRIM47-201ENST00000254816 KLRF2D3W0D1 207 aa21.78■■□□□ 1.08
TRIM47-201ENST00000254816 GDF11O95390 407 aa21.78■■□□□ 1.08
TRIM47-201ENST00000254816 TTLL1O95922 423 aa21.78■■□□□ 1.08
TRIM47-201ENST00000254816 PARP1P09874 1014 aaKnown RBP21.78■■□□□ 1.08
TRIM47-201ENST00000254816 XBP1P17861 261 aa21.78■■□□□ 1.08
TRIM47-201ENST00000254816 CLCN1P35523 988 aa21.78■■□□□ 1.08
TRIM47-201ENST00000254816 TNIP1Q15025 636 aa21.78■■□□□ 1.08
TRIM47-201ENST00000254816 STK38Q15208 465 aa21.78■■□□□ 1.08
TRIM47-201ENST00000254816 PFKFB3Q16875 520 aaPredicted RBP21.78■■□□□ 1.08
TRIM47-201ENST00000254816 LINC00301Q8NCQ3 95 aa21.78■■□□□ 1.08
TRIM47-201ENST00000254816 POLR3EQ9NVU0 708 aa21.78■■□□□ 1.08
TRIM47-201ENST00000254816 FRMPD2Q68DX3 1309 aaPredicted RBP21.78■■□□□ 1.08
TRIM47-201ENST00000254816 GNAQP50148 359 aa21.78■■□□□ 1.08
TRIM47-201ENST00000254816 RBM26Q5T8P6 1007 aaKnown RBP21.78■■□□□ 1.08
TRIM47-201ENST00000254816 ANO1Q5XXA6 986 aa21.78■■□□□ 1.08
TRIM47-201ENST00000254816 TATDN1Q6P1N9 297 aa21.78■■□□□ 1.08
TRIM47-201ENST00000254816 MYOZ2Q9NPC6 264 aa21.78■■□□□ 1.08
TRIM47-201ENST00000254816 GJA3Q9Y6H8 435 aa21.78■■□□□ 1.08
TRIM47-201ENST00000254816 WNT10BO00744 389 aa21.77■■□□□ 1.08
TRIM47-201ENST00000254816 EGFRP00533 1210 aa21.77■■□□□ 1.08
TRIM47-201ENST00000254816 ME1P48163 572 aa21.77■■□□□ 1.08
TRIM47-201ENST00000254816 CDAN1Q8IWY9 1227 aa21.77■■□□□ 1.08
TRIM47-201ENST00000254816 MTMR14Q8NCE2 650 aa21.77■■□□□ 1.08
TRIM47-201ENST00000254816 GPKOWQ92917 476 aaPredicted RBP eCLIP21.77■■□□□ 1.08
TRIM47-201ENST00000254816 CCDC17Q96LX7 622 aa21.77■■□□□ 1.08
TRIM47-201ENST00000254816 FOXP1Q9H334 677 aaPredicted RBP21.77■■□□□ 1.08
TRIM47-201ENST00000254816 PDHBP11177 359 aa21.77■■□□□ 1.08
TRIM47-201ENST00000254816 SF3A1Q15459 793 aaKnown RBP21.77■■□□□ 1.08
TRIM47-201ENST00000254816 CCDC183Q5T5S1 534 aa21.77■■□□□ 1.08
TRIM47-201ENST00000254816 COL2A1P02458 1487 aaPredicted RBP21.77■■□□□ 1.07
TRIM47-201ENST00000254816 RRP1BQ14684 758 aaKnown RBP21.76■■□□□ 1.07
TRIM47-201ENST00000254816 FAM151AQ8WW52 585 aa21.76■■□□□ 1.07
TRIM47-201ENST00000254816 ZBED3Q96IU2 234 aaPredicted RBP21.76■■□□□ 1.07
TRIM47-201ENST00000254816 FHDC1Q9C0D6 1143 aaPredicted RBP21.76■■□□□ 1.07
TRIM47-201ENST00000254816 TMEM39BQ9GZU3 492 aa21.76■■□□□ 1.07
TRIM47-201ENST00000254816 PCDHA7Q9UN72 937 aa21.76■■□□□ 1.07
TRIM47-201ENST00000254816 FAM205CA6NFA0 338 aa21.76■■□□□ 1.07
TRIM47-201ENST00000254816 JAG1P78504 1218 aa21.76■■□□□ 1.07
TRIM47-201ENST00000254816 METTL16Q86W50 562 aaKnown RBP21.76■■□□□ 1.07
TRIM47-201ENST00000254816 UBA5Q9GZZ9 404 aa21.76■■□□□ 1.07
TRIM47-201ENST00000254816 ADAMTS3O15072 1205 aa21.75■■□□□ 1.07
TRIM47-201ENST00000254816 KRT2P35908 639 aa21.75■■□□□ 1.07
TRIM47-201ENST00000254816 SEPT2Q15019 361 aa21.75■■□□□ 1.07
TRIM47-201ENST00000254816 NPY5RQ15761 445 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms