RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 FANCLQ9NW38 375 aa10.52□□□□□ -0.73
RPA1-201ENST00000254719 TFCP2L1Q9NZI6 479 aa10.52□□□□□ -0.73
RPA1-201ENST00000254719 JAG2Q9Y219 1238 aa10.52□□□□□ -0.73
RPA1-201ENST00000254719 TMEM67Q5HYA8 995 aa10.51□□□□□ -0.73
RPA1-201ENST00000254719 CCDC82Q8N4S0 544 aa10.51□□□□□ -0.73
RPA1-201ENST00000254719 CCDC112Q8NEF3 446 aa10.51□□□□□ -0.73
RPA1-201ENST00000254719 PRIMPOLQ96LW4 560 aa10.51□□□□□ -0.73
RPA1-201ENST00000254719 BRIP1Q9BX63 1249 aa10.51□□□□□ -0.73
RPA1-201ENST00000254719 NARFQ9UHQ1 456 aa10.51□□□□□ -0.73
RPA1-201ENST00000254719 MAD2L2Q9UI95 211 aa10.51□□□□□ -0.73
RPA1-201ENST00000254719 SMC2O95347 1197 aa10.51□□□□□ -0.73
RPA1-201ENST00000254719 TFRCP02786 760 aaKnown RBP10.51□□□□□ -0.73
RPA1-201ENST00000254719 MAP3K12Q12852 859 aa10.51□□□□□ -0.73
RPA1-201ENST00000254719 PARP10Q53GL7 1025 aa10.51□□□□□ -0.73
RPA1-201ENST00000254719 DIS3L2Q8IYB7 885 aaKnown RBP10.51□□□□□ -0.73
RPA1-201ENST00000254719 AIDAQ96BJ3 306 aa10.51□□□□□ -0.73
RPA1-201ENST00000254719 FOXP1Q9H334 677 aaPredicted RBP10.51□□□□□ -0.73
RPA1-201ENST00000254719 VPS54Q9P1Q0 977 aa10.51□□□□□ -0.73
RPA1-201ENST00000254719 FLT1P17948 1338 aa10.51□□□□□ -0.73
RPA1-201ENST00000254719 GSDMDP57764 484 aa10.51□□□□□ -0.73
RPA1-201ENST00000254719 SLC26A6Q9BXS9 759 aa10.51□□□□□ -0.73
RPA1-201ENST00000254719 SRPRBQ9Y5M8 271 aaKnown RBP10.51□□□□□ -0.73
RPA1-201ENST00000254719 VWA3AA6NCI4 1184 aa10.5□□□□□ -0.73
RPA1-201ENST00000254719 IKBKBO14920 756 aa10.5□□□□□ -0.73
RPA1-201ENST00000254719 COBLO75128 1261 aa10.5□□□□□ -0.73
RPA1-201ENST00000254719 UBE4AQ14139 1066 aa10.5□□□□□ -0.73
RPA1-201ENST00000254719 IFNKQ9P0W0 207 aa10.5□□□□□ -0.73
RPA1-201ENST00000254719 USP17L8P0C7I0 530 aa10.5□□□□□ -0.73
RPA1-201ENST00000254719 RHBDL3P58872 404 aa10.5□□□□□ -0.73
RPA1-201ENST00000254719 CDKAL1Q5VV42 579 aa10.5□□□□□ -0.73
RPA1-201ENST00000254719 KIFC2Q96AC6 838 aa10.5□□□□□ -0.73
RPA1-201ENST00000254719 UBAC1Q9BSL1 405 aa10.5□□□□□ -0.73
RPA1-201ENST00000254719 MTA3Q9BTC8 594 aa10.5□□□□□ -0.73
RPA1-201ENST00000254719 TEX33O43247 280 aa10.5□□□□□ -0.73
RPA1-201ENST00000254719 PMS1P54277 932 aaKnown RBP10.5□□□□□ -0.73
RPA1-201ENST00000254719 NR1I3Q14994 352 aa10.5□□□□□ -0.73
RPA1-201ENST00000254719 PPP1R13BQ96KQ4 1090 aa10.5□□□□□ -0.73
RPA1-201ENST00000254719 ZSCAN10Q96SZ4 725 aaPredicted RBP10.5□□□□□ -0.73
RPA1-201ENST00000254719 RTFDC1Q9BY42 306 aaPredicted RBP10.5□□□□□ -0.73
RPA1-201ENST00000254719 SAMSN1Q9NSI8 373 aaKnown RBP10.5□□□□□ -0.73
RPA1-201ENST00000254719 FECHP22830 423 aa10.49□□□□□ -0.73
RPA1-201ENST00000254719 MTF1Q14872 753 aa10.49□□□□□ -0.73
RPA1-201ENST00000254719 SHROOM1Q2M3G4 852 aaPredicted RBP10.49□□□□□ -0.73
RPA1-201ENST00000254719 TMTC3Q6ZXV5 915 aa10.49□□□□□ -0.73
RPA1-201ENST00000254719 SLC44A5Q8NCS7 719 aa10.49□□□□□ -0.73
RPA1-201ENST00000254719 TRMT1Q9NXH9 659 aaKnown RBP10.49□□□□□ -0.73
RPA1-201ENST00000254719 CCDC152Q4G0S7 254 aa10.49□□□□□ -0.73
RPA1-201ENST00000254719 FAM47AQ5JRC9 791 aa10.49□□□□□ -0.73
RPA1-201ENST00000254719 RC3H1Q5TC82 1133 aaKnown RBP10.49□□□□□ -0.73
RPA1-201ENST00000254719 DYNLL2Q96FJ2 89 aa10.49□□□□□ -0.73
RPA1-201ENST00000254719 P2RX7Q99572 595 aaKnown RBP10.49□□□□□ -0.73
RPA1-201ENST00000254719 SERTAD1Q9UHV2 236 aa10.49□□□□□ -0.73
RPA1-201ENST00000254719 KLRG2A4D1S0 409 aaPredicted RBP10.49□□□□□ -0.73
RPA1-201ENST00000254719 USP17L12C9JPN9 530 aa10.49□□□□□ -0.73
RPA1-201ENST00000254719 USP17L21D6R901 530 aa10.49□□□□□ -0.73
RPA1-201ENST00000254719 RGL2O15211 777 aa10.49□□□□□ -0.73
RPA1-201ENST00000254719 KLRC4O43908 158 aa10.49□□□□□ -0.73
RPA1-201ENST00000254719 RCAN1P53805 252 aa10.49□□□□□ -0.73
RPA1-201ENST00000254719 PES1O00541 588 aaKnown RBP10.49□□□□□ -0.73
RPA1-201ENST00000254719 ORC4O43929 436 aa10.49□□□□□ -0.73
RPA1-201ENST00000254719 SERPINC1P01008 464 aa10.49□□□□□ -0.73
RPA1-201ENST00000254719 TDO2P48775 406 aa10.49□□□□□ -0.73
RPA1-201ENST00000254719 KMT5BQ4FZB7 885 aa10.49□□□□□ -0.73
RPA1-201ENST00000254719 SMYD4Q8IYR2 804 aaPredicted RBP10.49□□□□□ -0.73
RPA1-201ENST00000254719 ANKS1AQ92625 1134 aa10.49□□□□□ -0.73
RPA1-201ENST00000254719 KCNH3Q9ULD8 1083 aa10.49□□□□□ -0.73
RPA1-201ENST00000254719 PARP14Q460N5 1801 aa10.49□□□□□ -0.73
RPA1-201ENST00000254719 TUBB4AP04350 444 aa10.48□□□□□ -0.73
RPA1-201ENST00000254719 LMOD1P29536 600 aaPredicted RBP10.48□□□□□ -0.73
RPA1-201ENST00000254719 ZNF579Q8NAF0 562 aaKnown RBP10.48□□□□□ -0.73
RPA1-201ENST00000254719 PYM1Q9BRP8 204 aaKnown RBP10.48□□□□□ -0.73
RPA1-201ENST00000254719 IFIT3O14879 490 aaKnown RBP10.48□□□□□ -0.73
RPA1-201ENST00000254719 RPS6KA4O75676 772 aa10.48□□□□□ -0.73
RPA1-201ENST00000254719 CYP7A1P22680 504 aa10.48□□□□□ -0.73
RPA1-201ENST00000254719 VSTM4Q8IW00 320 aa10.48□□□□□ -0.73
RPA1-201ENST00000254719 SH3RF3Q8TEJ3 882 aaPredicted RBP10.48□□□□□ -0.73
RPA1-201ENST00000254719 WDR81Q562E7 1941 aa10.48□□□□□ -0.73
RPA1-201ENST00000254719 GOLGA8AA7E2F4 631 aa10.48□□□□□ -0.73
RPA1-201ENST00000254719 PRPF3O43395 683 aaKnown RBP10.48□□□□□ -0.73
RPA1-201ENST00000254719 DDR1Q08345 913 aa10.48□□□□□ -0.73
RPA1-201ENST00000254719 STIM1Q13586 685 aa10.48□□□□□ -0.73
RPA1-201ENST00000254719 SBK1Q52WX2 424 aa10.48□□□□□ -0.73
RPA1-201ENST00000254719 CREBRFQ8IUR6 639 aa10.48□□□□□ -0.73
RPA1-201ENST00000254719 TMEM60Q9H2L4 133 aa10.48□□□□□ -0.73
RPA1-201ENST00000254719 CPVLQ9H3G5 476 aa10.48□□□□□ -0.73
RPA1-201ENST00000254719 POLR2DO15514 142 aaKnown RBP10.47□□□□□ -0.73
RPA1-201ENST00000254719 ADRA2BP18089 450 aa10.47□□□□□ -0.73
RPA1-201ENST00000254719 FANCCQ00597 558 aa10.47□□□□□ -0.73
RPA1-201ENST00000254719 DIXDC1Q155Q3 683 aa10.47□□□□□ -0.73
RPA1-201ENST00000254719 MFSD6Q6ZSS7 791 aa10.47□□□□□ -0.73
RPA1-201ENST00000254719 TRMT44Q8IYL2 757 aaKnown RBP10.47□□□□□ -0.73
RPA1-201ENST00000254719 TMTC2Q8N394 836 aa10.47□□□□□ -0.73
RPA1-201ENST00000254719 NAPBQ9H115 298 aa10.47□□□□□ -0.73
RPA1-201ENST00000254719 AATFQ9NY61 560 aaKnown RBP eCLIP10.47□□□□□ -0.73
RPA1-201ENST00000254719 IARSP41252 1262 aaKnown RBP10.47□□□□□ -0.73
RPA1-201ENST00000254719 C12orf60Q5U649 245 aa10.47□□□□□ -0.73
RPA1-201ENST00000254719 TXLNBQ8N3L3 684 aa10.47□□□□□ -0.73
RPA1-201ENST00000254719 CDCA7Q9BWT1 371 aaPredicted RBP10.47□□□□□ -0.73
RPA1-201ENST00000254719 RNF26Q9BY78 433 aaPredicted RBP10.47□□□□□ -0.73
RPA1-201ENST00000254719 POLLQ9UGP5 575 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms