RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 PFKFB1P16118 471 aa20.72■□□□□ 0.91
SMARCC1-201ENST00000254480 NLRX1Q86UT6 975 aa20.72■□□□□ 0.91
SMARCC1-201ENST00000254480 CCT6BQ92526 530 aa20.72■□□□□ 0.91
SMARCC1-201ENST00000254480 BABAM1Q9NWV8 329 aa20.72■□□□□ 0.91
SMARCC1-201ENST00000254480 PZPP20742 1482 aa20.72■□□□□ 0.91
SMARCC1-201ENST00000254480 CHRNDQ07001 517 aa20.72■□□□□ 0.91
SMARCC1-201ENST00000254480 SPICE1Q8N0Z3 855 aa20.72■□□□□ 0.91
SMARCC1-201ENST00000254480 PDE6AP16499 860 aa20.72■□□□□ 0.91
SMARCC1-201ENST00000254480 ALDH1B1P30837 517 aa20.72■□□□□ 0.91
SMARCC1-201ENST00000254480 PPP1R2P41236 205 aa20.72■□□□□ 0.91
SMARCC1-201ENST00000254480 SFMBT2Q5VUG0 894 aa20.72■□□□□ 0.91
SMARCC1-201ENST00000254480 DSCC1Q9BVC3 393 aa20.72■□□□□ 0.91
SMARCC1-201ENST00000254480 BTDP43251 543 aa20.71■□□□□ 0.91
SMARCC1-201ENST00000254480 GADL1Q6ZQY3 521 aa20.71■□□□□ 0.91
SMARCC1-201ENST00000254480 ADAT2Q7Z6V5 191 aaKnown RBP20.71■□□□□ 0.91
SMARCC1-201ENST00000254480 CCDC105Q8IYK2 499 aa20.71■□□□□ 0.91
SMARCC1-201ENST00000254480 CLUL1Q15846 466 aa20.71■□□□□ 0.91
SMARCC1-201ENST00000254480 SPATA24Q86W54 205 aa20.71■□□□□ 0.91
SMARCC1-201ENST00000254480 TLR7Q9NYK1 1049 aaKnown RBP20.71■□□□□ 0.91
SMARCC1-201ENST00000254480 HSPD1P10809 573 aaKnown RBP20.71■□□□□ 0.91
SMARCC1-201ENST00000254480 U2AF1L4Q8WU68 220 aaKnown RBP20.71■□□□□ 0.91
SMARCC1-201ENST00000254480 USP28Q96RU2 1077 aa20.71■□□□□ 0.91
SMARCC1-201ENST00000254480 ABL1P00519 1130 aa20.71■□□□□ 0.91
SMARCC1-201ENST00000254480 DNM2P50570 870 aa20.71■□□□□ 0.91
SMARCC1-201ENST00000254480 PTPN21Q16825 1174 aa20.71■□□□□ 0.91
SMARCC1-201ENST00000254480 TNKSO95271 1327 aa20.71■□□□□ 0.91
SMARCC1-201ENST00000254480 PSMD6Q15008 389 aa20.71■□□□□ 0.91
SMARCC1-201ENST00000254480 PSTPIP2Q9H939 334 aa20.71■□□□□ 0.91
SMARCC1-201ENST00000254480 ARPP21Q9UBL0 812 aaPredicted RBP20.71■□□□□ 0.91
SMARCC1-201ENST00000254480 ASAP1Q9ULH1 1129 aa20.71■□□□□ 0.91
SMARCC1-201ENST00000254480 TRPC6Q9Y210 931 aa20.71■□□□□ 0.91
SMARCC1-201ENST00000254480 ZMYM4Q5VZL5 1548 aa20.7■□□□□ 0.9
SMARCC1-201ENST00000254480 ZMYND15Q9H091 742 aa20.7■□□□□ 0.9
SMARCC1-201ENST00000254480 CSRNP2Q9H175 543 aa20.7■□□□□ 0.9
SMARCC1-201ENST00000254480 MLXIPQ9HAP2 919 aa20.7■□□□□ 0.9
SMARCC1-201ENST00000254480 CLRN2A0PK11 232 aa20.7■□□□□ 0.9
SMARCC1-201ENST00000254480 PHKA1P46020 1223 aa20.7■□□□□ 0.9
SMARCC1-201ENST00000254480 MYSM1Q5VVJ2 828 aa20.7■□□□□ 0.9
SMARCC1-201ENST00000254480 RRAGDQ9NQL2 400 aaPredicted RBP20.7■□□□□ 0.9
SMARCC1-201ENST00000254480 H7C1D1 291 aa20.7■□□□□ 0.9
SMARCC1-201ENST00000254480 CNGA1P29973 690 aa20.7■□□□□ 0.9
SMARCC1-201ENST00000254480 KRBA2Q6ZNG9 492 aa20.7■□□□□ 0.9
SMARCC1-201ENST00000254480 MGARPQ8TDB4 240 aa20.7■□□□□ 0.9
SMARCC1-201ENST00000254480 NAP1L3Q99457 506 aaPredicted RBP20.7■□□□□ 0.9
SMARCC1-201ENST00000254480 FGAP02671 866 aa20.7■□□□□ 0.9
SMARCC1-201ENST00000254480 ITIH3Q06033 890 aa20.7■□□□□ 0.9
SMARCC1-201ENST00000254480 ARFGAP2Q8N6H7 521 aa20.7■□□□□ 0.9
SMARCC1-201ENST00000254480 PNMA1Q8ND90 353 aa20.7■□□□□ 0.9
SMARCC1-201ENST00000254480 SUGCTQ9HAC7 445 aa20.7■□□□□ 0.9
SMARCC1-201ENST00000254480 ACTN4O43707 911 aaKnown RBP20.7■□□□□ 0.9
SMARCC1-201ENST00000254480 IGBP1P78318 339 aa20.7■□□□□ 0.9
SMARCC1-201ENST00000254480 PEX26Q7Z412 305 aa20.7■□□□□ 0.9
SMARCC1-201ENST00000254480 ERO1AQ96HE7 468 aa20.7■□□□□ 0.9
SMARCC1-201ENST00000254480 CYP4A11Q02928 519 aa20.69■□□□□ 0.9
SMARCC1-201ENST00000254480 FMNL3Q8IVF7 1028 aa20.69■□□□□ 0.9
SMARCC1-201ENST00000254480 AFAP1L1Q8TED9 768 aa20.69■□□□□ 0.9
SMARCC1-201ENST00000254480 CCDC94Q9BW85 323 aaPredicted RBP20.69■□□□□ 0.9
SMARCC1-201ENST00000254480 MAN1A1P33908 653 aa20.69■□□□□ 0.9
SMARCC1-201ENST00000254480 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.69■□□□□ 0.9
SMARCC1-201ENST00000254480 SESTD1Q86VW0 696 aa20.69■□□□□ 0.9
SMARCC1-201ENST00000254480 CDAN1Q8IWY9 1227 aa20.69■□□□□ 0.9
SMARCC1-201ENST00000254480 WDR62O43379 1518 aa20.69■□□□□ 0.9
SMARCC1-201ENST00000254480 BUB1O43683 1085 aa20.69■□□□□ 0.9
SMARCC1-201ENST00000254480 GTF2A1P52655 376 aaPredicted RBP20.69■□□□□ 0.9
SMARCC1-201ENST00000254480 ARHGAP27Q6ZUM4 889 aa20.69■□□□□ 0.9
SMARCC1-201ENST00000254480 CSPG5O95196 566 aa20.69■□□□□ 0.9
SMARCC1-201ENST00000254480 CAPN12Q6ZSI9 719 aa20.69■□□□□ 0.9
SMARCC1-201ENST00000254480 BLIDQ8IZY5 108 aa20.69■□□□□ 0.9
SMARCC1-201ENST00000254480 SUPT20HQ8NEM7 779 aa20.69■□□□□ 0.9
SMARCC1-201ENST00000254480 TSC1Q92574 1164 aa20.69■□□□□ 0.9
SMARCC1-201ENST00000254480 KLRF2D3W0D1 207 aa20.69■□□□□ 0.9
SMARCC1-201ENST00000254480 DEPTORQ8TB45 409 aa20.69■□□□□ 0.9
SMARCC1-201ENST00000254480 BTBD18B2RXH4 712 aa20.68■□□□□ 0.9
SMARCC1-201ENST00000254480 VPS41P49754 854 aa20.68■□□□□ 0.9
SMARCC1-201ENST00000254480 GPR162Q16538 588 aa20.68■□□□□ 0.9
SMARCC1-201ENST00000254480 EP400NLQ6ZTU2 488 aa20.68■□□□□ 0.9
SMARCC1-201ENST00000254480 NUP58Q9BVL2 599 aa20.68■□□□□ 0.9
SMARCC1-201ENST00000254480 GLT8D2Q9H1C3 349 aa20.68■□□□□ 0.9
SMARCC1-201ENST00000254480 SLC39A2Q9NP94 309 aa20.68■□□□□ 0.9
SMARCC1-201ENST00000254480 ERVV-2B6SEH9 535 aa20.68■□□□□ 0.9
SMARCC1-201ENST00000254480 CERKLQ49MI3 558 aaPredicted RBP20.68■□□□□ 0.9
SMARCC1-201ENST00000254480 SCYL2Q6P3W7 929 aa20.68■□□□□ 0.9
SMARCC1-201ENST00000254480 CCDC110Q8TBZ0 833 aa20.68■□□□□ 0.9
SMARCC1-201ENST00000254480 BCRP11274 1271 aa20.68■□□□□ 0.9
SMARCC1-201ENST00000254480 TBC1D22AQ8WUA7 517 aa20.68■□□□□ 0.9
SMARCC1-201ENST00000254480 IFIH1Q9BYX4 1025 aaKnown RBP20.68■□□□□ 0.9
SMARCC1-201ENST00000254480 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.68■□□□□ 0.92e-6■□□□□ 9.4
SMARCC1-201ENST00000254480 DKC1O60832 514 aaKnown RBP eCLIP20.68■□□□□ 0.91e-11■■□□□ 11.4
SMARCC1-201ENST00000254480 ZBTB38Q8NAP3 1195 aaPredicted RBP20.68■□□□□ 0.9
SMARCC1-201ENST00000254480 ALDH3A1P30838 453 aa20.67■□□□□ 0.9
SMARCC1-201ENST00000254480 FANCBQ8NB91 859 aa20.67■□□□□ 0.9
SMARCC1-201ENST00000254480 CSADQ9Y600 493 aa20.67■□□□□ 0.9
SMARCC1-201ENST00000254480 DLATP10515 647 aaKnown RBP20.67■□□□□ 0.9
SMARCC1-201ENST00000254480 GUCY2FP51841 1108 aa20.67■□□□□ 0.9
SMARCC1-201ENST00000254480 POLA2Q14181 598 aa20.67■□□□□ 0.9
SMARCC1-201ENST00000254480 LZTS2Q9BRK4 669 aa20.67■□□□□ 0.9
SMARCC1-201ENST00000254480 YARSP54577 528 aaKnown RBP20.67■□□□□ 0.9
SMARCC1-201ENST00000254480 RPS6KA1Q15418 735 aa20.67■□□□□ 0.9
SMARCC1-201ENST00000254480 XKR9Q5GH70 373 aa20.67■□□□□ 0.9
SMARCC1-201ENST00000254480 NCAPG2Q86XI2 1143 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms