RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 ELOA2Q8IYF1 753 aaPredicted RBP24.8■■□□□ 1.56
CLN6-201ENST00000249806 CDK5RAP2Q96SN8 1893 aa24.8■■□□□ 1.56
CLN6-201ENST00000249806 TPM4P67936 248 aa24.8■■□□□ 1.56
CLN6-201ENST00000249806 PIK3AP1Q6ZUJ8 805 aa24.8■■□□□ 1.56
CLN6-201ENST00000249806 ANKS1AQ92625 1134 aa24.8■■□□□ 1.56
CLN6-201ENST00000249806 CRAMP1Q96RY5 1269 aa24.8■■□□□ 1.56
CLN6-201ENST00000249806 A0A087X0B3 334 aa24.79■■□□□ 1.56
CLN6-201ENST00000249806 ACTN4O43707 911 aaKnown RBP24.79■■□□□ 1.56
CLN6-201ENST00000249806 RASA1P20936 1047 aa24.79■■□□□ 1.56
CLN6-201ENST00000249806 TTC38Q5R3I4 469 aa24.79■■□□□ 1.56
CLN6-201ENST00000249806 TEX11Q8IYF3 940 aa24.79■■□□□ 1.56
CLN6-201ENST00000249806 HOOK1Q9UJC3 728 aaKnown RBP24.79■■□□□ 1.56
CLN6-201ENST00000249806 STX8Q9UNK0 236 aa24.79■■□□□ 1.56
CLN6-201ENST00000249806 OLFM4Q6UX06 510 aa24.78■■□□□ 1.56
CLN6-201ENST00000249806 GPKOWQ92917 476 aaPredicted RBP eCLIP24.78■■□□□ 1.56
CLN6-201ENST00000249806 MAD2L2Q9UI95 211 aa24.78■■□□□ 1.56
CLN6-201ENST00000249806 MAN1B1Q9UKM7 699 aa24.78■■□□□ 1.56
CLN6-201ENST00000249806 GOLGB1Q14789 3259 aaKnown RBP24.78■■□□□ 1.56
CLN6-201ENST00000249806 KLRG2A4D1S0 409 aaPredicted RBP24.78■■□□□ 1.56
CLN6-201ENST00000249806 RIMBP2O15034 1052 aa24.78■■□□□ 1.56
CLN6-201ENST00000249806 MYL5Q02045 173 aa24.78■■□□□ 1.56
CLN6-201ENST00000249806 FANCCQ00597 558 aa24.77■■□□□ 1.56
CLN6-201ENST00000249806 PTGDRQ13258 359 aa24.77■■□□□ 1.56
CLN6-201ENST00000249806 SARSP49591 514 aaKnown RBP24.77■■□□□ 1.56
CLN6-201ENST00000249806 RHBDL3P58872 404 aa24.77■■□□□ 1.56
CLN6-201ENST00000249806 SLC35G1Q2M3R5 365 aa24.77■■□□□ 1.56
CLN6-201ENST00000249806 DHX58Q96C10 678 aa24.77■■□□□ 1.56
CLN6-201ENST00000249806 TMEM47Q9BQJ4 181 aa24.77■■□□□ 1.56
CLN6-201ENST00000249806 TCP11L1Q9NUJ3 509 aa24.77■■□□□ 1.56
CLN6-201ENST00000249806 SKILP12757 684 aa24.76■■□□□ 1.55
CLN6-201ENST00000249806 CDK8P49336 464 aa24.76■■□□□ 1.55
CLN6-201ENST00000249806 GTF2IP78347 998 aa24.76■■□□□ 1.55
CLN6-201ENST00000249806 GRM4Q14833 912 aa24.76■■□□□ 1.55
CLN6-201ENST00000249806 ZNF827Q17R98 1081 aa24.76■■□□□ 1.55
CLN6-201ENST00000249806 NT5DC1Q5TFE4 455 aa24.76■■□□□ 1.55
CLN6-201ENST00000249806 SYMPKQ92797 1274 aaKnown RBP24.76■■□□□ 1.55
CLN6-201ENST00000249806 MORC2Q9Y6X9 1032 aaPredicted RBP24.76■■□□□ 1.55
CLN6-201ENST00000249806 FLT1P17948 1338 aa24.76■■□□□ 1.55
CLN6-201ENST00000249806 TMC6Q7Z403 805 aa24.76■■□□□ 1.55
CLN6-201ENST00000249806 SMARCE1Q969G3 411 aa24.76■■□□□ 1.55
CLN6-201ENST00000249806 FANCLQ9NW38 375 aa24.76■■□□□ 1.55
CLN6-201ENST00000249806 VWA3AA6NCI4 1184 aa24.75■■□□□ 1.55
CLN6-201ENST00000249806 PPEF1O14829 653 aaPredicted RBP24.75■■□□□ 1.55
CLN6-201ENST00000249806 CYTH3O43739 400 aa24.75■■□□□ 1.55
CLN6-201ENST00000249806 CCZ1BP86790 482 aa24.75■■□□□ 1.55
CLN6-201ENST00000249806 CCZ1P86791 482 aaPredicted RBP24.75■■□□□ 1.55
CLN6-201ENST00000249806 TYW1BQ6NUM6 668 aa24.75■■□□□ 1.55
CLN6-201ENST00000249806 RASGRP2Q7LDG7 609 aa24.75■■□□□ 1.55
CLN6-201ENST00000249806 FERMT2Q96AC1 680 aa24.75■■□□□ 1.55
CLN6-201ENST00000249806 PRIMPOLQ96LW4 560 aa24.75■■□□□ 1.55
CLN6-201ENST00000249806 NEMFO60524 1076 aa24.74■■□□□ 1.55
CLN6-201ENST00000249806 SP8Q8IXZ3 490 aa24.74■■□□□ 1.55
CLN6-201ENST00000249806 FAM163AQ96GL9 167 aaPredicted RBP24.74■■□□□ 1.55
CLN6-201ENST00000249806 OSBPL5Q9H0X9 879 aaPredicted RBP24.74■■□□□ 1.55
CLN6-201ENST00000249806 BMP15O95972 392 aa24.74■■□□□ 1.55
CLN6-201ENST00000249806 GOLGA8HP0CJ92 632 aa24.74■■□□□ 1.55
CLN6-201ENST00000249806 MCM7P33993 719 aa24.74■■□□□ 1.55
CLN6-201ENST00000249806 NT5C2P49902 561 aa24.74■■□□□ 1.55
CLN6-201ENST00000249806 ATP2C1P98194 919 aaPredicted RBP24.74■■□□□ 1.55
CLN6-201ENST00000249806 CCDC178Q5BJE1 867 aa24.74■■□□□ 1.55
CLN6-201ENST00000249806 C16orf86Q6ZW13 317 aa24.74■■□□□ 1.55
CLN6-201ENST00000249806 MYRIPQ8NFW9 859 aa24.74■■□□□ 1.55
CLN6-201ENST00000249806 DPF2Q92785 391 aa24.74■■□□□ 1.55
CLN6-201ENST00000249806 C16orf45Q96MC5 204 aaPredicted RBP24.74■■□□□ 1.55
CLN6-201ENST00000249806 EYA3Q99504 573 aa24.74■■□□□ 1.55
CLN6-201ENST00000249806 KANK3Q6NY19 840 aa24.73■■□□□ 1.55
CLN6-201ENST00000249806 CERS3Q8IU89 383 aa24.73■■□□□ 1.55
CLN6-201ENST00000249806 RASGRP4Q8TDF6 673 aa24.73■■□□□ 1.55
CLN6-201ENST00000249806 TBC1D22AQ8WUA7 517 aa24.73■■□□□ 1.55
CLN6-201ENST00000249806 IMPACTQ9P2X3 320 aa24.73■■□□□ 1.55
CLN6-201ENST00000249806 FAM205AQ6ZU69 1335 aa24.73■■□□□ 1.55
CLN6-201ENST00000249806 AFMP43652 599 aa24.73■■□□□ 1.55
CLN6-201ENST00000249806 MORC3Q14149 939 aa24.73■■□□□ 1.55
CLN6-201ENST00000249806 HSP90AA4PQ58FG1 418 aa24.73■■□□□ 1.55
CLN6-201ENST00000249806 BLIDQ8IZY5 108 aa24.73■■□□□ 1.55
CLN6-201ENST00000249806 PLCG2P16885 1265 aa24.72■■□□□ 1.55
CLN6-201ENST00000249806 CASP1P29466 404 aa24.72■■□□□ 1.55
CLN6-201ENST00000249806 CPVLQ9H3G5 476 aa24.72■■□□□ 1.55
CLN6-201ENST00000249806 ZNF287Q9HBT7 754 aa24.72■■□□□ 1.55
CLN6-201ENST00000249806 GAKO14976 1311 aa24.72■■□□□ 1.55
CLN6-201ENST00000249806 MYH1P12882 1939 aa24.72■■□□□ 1.55
CLN6-201ENST00000249806 F8W031 263 aaPredicted RBP24.71■■□□□ 1.55
CLN6-201ENST00000249806 SERPINC1P01008 464 aa24.71■■□□□ 1.55
CLN6-201ENST00000249806 GNAQP50148 359 aa24.71■■□□□ 1.55
CLN6-201ENST00000249806 UBASH3AP57075 661 aa24.71■■□□□ 1.55
CLN6-201ENST00000249806 GSDMDP57764 484 aa24.71■■□□□ 1.55
CLN6-201ENST00000249806 FMR1Q06787 632 aaKnown RBP eCLIP24.71■■□□□ 1.55
CLN6-201ENST00000249806 SPATA20Q8TB22 786 aa24.71■■□□□ 1.55
CLN6-201ENST00000249806 ATP6V0A2Q9Y487 856 aa24.71■■□□□ 1.55
CLN6-201ENST00000249806 DDX60LQ5H9U9 1706 aaKnown RBP24.71■■□□□ 1.55
CLN6-201ENST00000249806 SNED1Q8TER0 1413 aa24.71■■□□□ 1.55
CLN6-201ENST00000249806 LTBP1Q14766 1721 aa24.71■■□□□ 1.55
CLN6-201ENST00000249806 PALM3A6NDB9 673 aaPredicted RBP24.71■■□□□ 1.55
CLN6-201ENST00000249806 USP27XA6NNY8 438 aa24.71■■□□□ 1.55
CLN6-201ENST00000249806 SLFN14P0C7P3 912 aa24.71■■□□□ 1.55
CLN6-201ENST00000249806 CALML3P27482 149 aa24.71■■□□□ 1.55
CLN6-201ENST00000249806 RBM10P98175 930 aaKnown RBP24.71■■□□□ 1.55
CLN6-201ENST00000249806 IL17AQ16552 155 aa24.71■■□□□ 1.55
CLN6-201ENST00000249806 ARMCX5Q6P1M9 558 aa24.71■■□□□ 1.55
CLN6-201ENST00000249806 COL23A1Q86Y22 540 aaPredicted RBP24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms