RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 AFMP43652 599 aa22.29■■□□□ 1.16
CDC42EP1-201ENST00000249014 PTGDRQ13258 359 aa22.29■■□□□ 1.16
CDC42EP1-201ENST00000249014 PFKFB3Q16875 520 aaPredicted RBP22.29■■□□□ 1.16
CDC42EP1-201ENST00000249014 C12orf60Q5U649 245 aa22.29■■□□□ 1.16
CDC42EP1-201ENST00000249014 TMED8Q6PL24 325 aaPredicted RBP22.29■■□□□ 1.16
CDC42EP1-201ENST00000249014 SH3RF1Q7Z6J0 888 aa22.29■■□□□ 1.16
CDC42EP1-201ENST00000249014 DACH1Q9UI36 760 aa22.29■■□□□ 1.16
CDC42EP1-201ENST00000249014 BMP15O95972 392 aa22.28■■□□□ 1.16
CDC42EP1-201ENST00000249014 SLFN14P0C7P3 912 aa22.28■■□□□ 1.16
CDC42EP1-201ENST00000249014 SYCP1Q15431 976 aa22.28■■□□□ 1.16
CDC42EP1-201ENST00000249014 PDCL2Q8N4E4 241 aa22.28■■□□□ 1.16
CDC42EP1-201ENST00000249014 SH3RF3Q8TEJ3 882 aaPredicted RBP22.28■■□□□ 1.16
CDC42EP1-201ENST00000249014 DYNLL2Q96FJ2 89 aa22.28■■□□□ 1.16
CDC42EP1-201ENST00000249014 PAGE5Q96GU1 130 aa22.28■■□□□ 1.16
CDC42EP1-201ENST00000249014 LDHBP07195 334 aaKnown RBP22.28■■□□□ 1.16
CDC42EP1-201ENST00000249014 RFC4P35249 363 aa22.28■■□□□ 1.16
CDC42EP1-201ENST00000249014 NLRP5P59047 1200 aa22.28■■□□□ 1.16
CDC42EP1-201ENST00000249014 ATP2C1P98194 919 aaPredicted RBP22.28■■□□□ 1.16
CDC42EP1-201ENST00000249014 TFAP4Q01664 338 aa22.28■■□□□ 1.16
CDC42EP1-201ENST00000249014 GRAPQ13588 217 aa22.28■■□□□ 1.16
CDC42EP1-201ENST00000249014 PIK3AP1Q6ZUJ8 805 aa22.28■■□□□ 1.16
CDC42EP1-201ENST00000249014 KIF18AQ8NI77 898 aa22.28■■□□□ 1.16
CDC42EP1-201ENST00000249014 GRAPLQ8TC17 118 aaPredicted RBP22.28■■□□□ 1.16
CDC42EP1-201ENST00000249014 BCL11BQ9C0K0 894 aaPredicted RBP22.28■■□□□ 1.16
CDC42EP1-201ENST00000249014 SAMSN1Q9NSI8 373 aaKnown RBP22.28■■□□□ 1.16
CDC42EP1-201ENST00000249014 VWA3AA6NCI4 1184 aa22.27■■□□□ 1.16
CDC42EP1-201ENST00000249014 NRDCO43847 1150 aa22.27■■□□□ 1.16
CDC42EP1-201ENST00000249014 PLCD1P51178 756 aa22.27■■□□□ 1.16
CDC42EP1-201ENST00000249014 DIXDC1Q155Q3 683 aa22.27■■□□□ 1.16
CDC42EP1-201ENST00000249014 GPR101Q96P66 508 aaPredicted RBP22.27■■□□□ 1.16
CDC42EP1-201ENST00000249014 USP5P45974 858 aa22.26■■□□□ 1.15
CDC42EP1-201ENST00000249014 WDR66Q8TBY9 1149 aa22.26■■□□□ 1.15
CDC42EP1-201ENST00000249014 KIF2AO00139 706 aaPredicted RBP22.26■■□□□ 1.15
CDC42EP1-201ENST00000249014 TBX2Q13207 712 aaPredicted RBP22.26■■□□□ 1.15
CDC42EP1-201ENST00000249014 TRAPPC3LQ5T215 181 aa22.26■■□□□ 1.15
CDC42EP1-201ENST00000249014 AEBP2Q6ZN18 517 aaPredicted RBP22.26■■□□□ 1.15
CDC42EP1-201ENST00000249014 KAT14Q9H8E8 782 aa22.26■■□□□ 1.15
CDC42EP1-201ENST00000249014 USP21Q9UK80 565 aa22.26■■□□□ 1.15
CDC42EP1-201ENST00000249014 LEMD3Q9Y2U8 911 aa22.26■■□□□ 1.15
CDC42EP1-201ENST00000249014 CD44P16070 742 aaKnown RBP22.25■■□□□ 1.15
CDC42EP1-201ENST00000249014 CDK11BP21127 795 aaKnown RBP22.25■■□□□ 1.15
CDC42EP1-201ENST00000249014 PPP4R3BQ5MIZ7 849 aa22.25■■□□□ 1.15
CDC42EP1-201ENST00000249014 STAG2Q8N3U4 1231 aa22.25■■□□□ 1.15
CDC42EP1-201ENST00000249014 ZNF215Q9UL58 517 aaPredicted RBP22.25■■□□□ 1.15
CDC42EP1-201ENST00000249014 NAV1Q8NEY1 1877 aa22.25■■□□□ 1.15
CDC42EP1-201ENST00000249014 ERCC5P28715 1186 aaPredicted RBP22.25■■□□□ 1.15
CDC42EP1-201ENST00000249014 KIF5BP33176 963 aa22.25■■□□□ 1.15
CDC42EP1-201ENST00000249014 DPYDQ12882 1025 aa22.25■■□□□ 1.15
CDC42EP1-201ENST00000249014 IL17AQ16552 155 aa22.25■■□□□ 1.15
CDC42EP1-201ENST00000249014 TMEM139Q8IV31 216 aa22.25■■□□□ 1.15
CDC42EP1-201ENST00000249014 FAM196AQ6ZSG2 479 aa22.24■■□□□ 1.15
CDC42EP1-201ENST00000249014 DGKHQ86XP1 1220 aa22.24■■□□□ 1.15
CDC42EP1-201ENST00000249014 PNMA1Q8ND90 353 aa22.24■■□□□ 1.15
CDC42EP1-201ENST00000249014 CDK5RAP2Q96SN8 1893 aa22.24■■□□□ 1.15
CDC42EP1-201ENST00000249014 ROBO3Q96MS0 1386 aa22.24■■□□□ 1.15
CDC42EP1-201ENST00000249014 XDHP47989 1333 aa22.24■■□□□ 1.15
CDC42EP1-201ENST00000249014 USP17L3A6NCW0 530 aa22.23■■□□□ 1.15
CDC42EP1-201ENST00000249014 USP17L4A6NCW7 530 aa22.23■■□□□ 1.15
CDC42EP1-201ENST00000249014 MCM7P33993 719 aa22.23■■□□□ 1.15
CDC42EP1-201ENST00000249014 SYT10Q6XYQ8 523 aa22.23■■□□□ 1.15
CDC42EP1-201ENST00000249014 USP17L1Q7RTZ2 530 aa22.23■■□□□ 1.15
CDC42EP1-201ENST00000249014 CNBD1Q8NA66 436 aa22.23■■□□□ 1.15
CDC42EP1-201ENST00000249014 GPKOWQ92917 476 aaPredicted RBP eCLIP22.23■■□□□ 1.15
CDC42EP1-201ENST00000249014 TRAPPC10P48553 1259 aa22.23■■□□□ 1.15
CDC42EP1-201ENST00000249014 SLC44A5Q8NCS7 719 aa22.23■■□□□ 1.15
CDC42EP1-201ENST00000249014 TGFBRAP1Q8WUH2 860 aa22.23■■□□□ 1.15
CDC42EP1-201ENST00000249014 STAMQ92783 540 aa22.23■■□□□ 1.15
CDC42EP1-201ENST00000249014 CCDC34Q96HJ3 373 aa22.23■■□□□ 1.15
CDC42EP1-201ENST00000249014 FAM205AQ6ZU69 1335 aa22.23■■□□□ 1.15
CDC42EP1-201ENST00000249014 CUL4BQ13620 913 aa22.22■■□□□ 1.15
CDC42EP1-201ENST00000249014 E2F4Q16254 413 aa22.22■■□□□ 1.15
CDC42EP1-201ENST00000249014 SMYD4Q8IYR2 804 aaPredicted RBP22.22■■□□□ 1.15
CDC42EP1-201ENST00000249014 ANKS1AQ92625 1134 aa22.22■■□□□ 1.15
CDC42EP1-201ENST00000249014 SLC35G1Q2M3R5 365 aa22.22■■□□□ 1.15
CDC42EP1-201ENST00000249014 SPECC1LQ69YQ0 1117 aa22.22■■□□□ 1.15
CDC42EP1-201ENST00000249014 KLHL10Q6JEL2 608 aa22.22■■□□□ 1.15
CDC42EP1-201ENST00000249014 TYW1BQ6NUM6 668 aa22.22■■□□□ 1.15
CDC42EP1-201ENST00000249014 GSDMAQ96QA5 445 aa22.22■■□□□ 1.15
CDC42EP1-201ENST00000249014 MKNK2Q9HBH9 465 aa22.22■■□□□ 1.15
CDC42EP1-201ENST00000249014 MAD2L2Q9UI95 211 aa22.22■■□□□ 1.15
CDC42EP1-201ENST00000249014 PPP4CP60510 307 aa22.21■■□□□ 1.15
CDC42EP1-201ENST00000249014 NR1I3Q14994 352 aa22.21■■□□□ 1.15
CDC42EP1-201ENST00000249014 ZNF804AQ7Z570 1209 aa22.21■■□□□ 1.15
CDC42EP1-201ENST00000249014 BLIDQ8IZY5 108 aa22.21■■□□□ 1.15
CDC42EP1-201ENST00000249014 STX17P56962 302 aa22.21■■□□□ 1.15
CDC42EP1-201ENST00000249014 GSTO1P78417 241 aa22.21■■□□□ 1.15
CDC42EP1-201ENST00000249014 GPSM2P81274 684 aa22.21■■□□□ 1.15
CDC42EP1-201ENST00000249014 GRM4Q14833 912 aa22.21■■□□□ 1.15
CDC42EP1-201ENST00000249014 PRR5LQ6MZQ0 368 aa22.21■■□□□ 1.15
CDC42EP1-201ENST00000249014 APTXQ7Z2E3 356 aaKnown RBP22.21■■□□□ 1.15
CDC42EP1-201ENST00000249014 TC2NQ8N9U0 490 aa22.21■■□□□ 1.15
CDC42EP1-201ENST00000249014 PPP1R3GB7ZBB8 358 aa22.2■■□□□ 1.14
CDC42EP1-201ENST00000249014 UBAP1LF5GYI3 381 aa22.2■■□□□ 1.14
CDC42EP1-201ENST00000249014 BAG3O95817 575 aa22.2■■□□□ 1.14
CDC42EP1-201ENST00000249014 C4orf32Q8N8J7 132 aa22.2■■□□□ 1.14
CDC42EP1-201ENST00000249014 RASGRP4Q8TDF6 673 aa22.2■■□□□ 1.14
CDC42EP1-201ENST00000249014 LRRC4BQ9NT99 713 aa22.2■■□□□ 1.14
CDC42EP1-201ENST00000249014 NOL12Q9UGY1 213 aaKnown RBP eCLIP22.2■■□□□ 1.14
CDC42EP1-201ENST00000249014 V9GYY5 206 aaPredicted RBP22.2■■□□□ 1.14
CDC42EP1-201ENST00000249014 SYNRGQ9UMZ2 1314 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms